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PMC:3218875 / 22113-22293 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T9472 133-136 Protein denotes A20
T9471 95-103 Protein denotes cytokine
T9470 63-66 Protein denotes TNF
T9469 38-41 Protein denotes TNF
T9468 3-6 Protein denotes A20

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T11585 179-180 . denotes .
T11584 177-179 NNP denotes RA
T11583 173-176 IN denotes for
T11582 167-172 NN denotes locus
T11581 152-166 NN denotes susceptibility
T11580 142-151 NN denotes candidate
T11579 140-141 DT denotes a
T11578 137-139 IN denotes as
T11577 133-136 NNP denotes A20
T11576 126-132 VBP denotes reveal
T11575 117-125 NNS denotes findings
T11574 111-116 DT denotes these
T11573 109-110 , denotes ,
T11572 107-109 NNP denotes RA
T11571 104-106 IN denotes in
T11570 95-103 NN denotes cytokine
T11569 82-94 JJ denotes inflammatory
T11568 74-81 JJ denotes primary
T11567 70-73 DT denotes the
T11566 67-69 VBZ denotes is
T11565 63-66 NNP denotes TNF
T11564 59-62 CC denotes and
T11563 57-58 , denotes ,
T11562 50-57 NNS denotes signals
T11561 38-49 JJ denotes TNF-induced
T11560 35-37 IN denotes of
T11559 23-34 NN denotes termination
T11558 19-22 IN denotes for
T11557 10-18 VBN denotes required
T11556 7-9 VBZ denotes is
T11555 3-6 NNP denotes A20
T11554 0-2 IN denotes As
R7931 T11554 T11557 mark As,required
R7933 T11555 T11557 nsubjpass A20,required
R7934 T11556 T11557 auxpass is,required
R7935 T11557 T11576 advcl required,reveal
R7936 T11558 T11557 prep for,required
R7938 T11559 T11558 pobj termination,for
R7939 T11560 T11559 prep of,termination
R7940 T11561 T11562 amod TNF-induced,signals
R7942 T11562 T11560 pobj signals,of
R7943 T11563 T11557 punct ",",required
R7944 T11564 T11557 cc and,required
R7945 T11565 T11566 nsubj TNF,is
R7946 T11566 T11557 conj is,required
R7947 T11567 T11570 det the,cytokine
R7949 T11568 T11570 amod primary,cytokine
R7950 T11569 T11570 amod inflammatory,cytokine
R7951 T11570 T11566 attr cytokine,is
R7952 T11571 T11570 prep in,cytokine
R7954 T11572 T11571 pobj RA,in
R7955 T11573 T11576 punct ",",reveal
R7956 T11574 T11575 det these,findings
R7957 T11575 T11576 nsubj findings,reveal
R7959 T11576 T11576 ROOT reveal,reveal
R7960 T11577 T11576 dobj A20,reveal
R7962 T11578 T11576 prep as,reveal
R7963 T11579 T11582 det a,locus
R7964 T11580 T11581 compound candidate,susceptibility
R7966 T11581 T11582 compound susceptibility,locus
R7967 T11582 T11578 pobj locus,as
R7968 T11583 T11582 prep for,locus
R7970 T11584 T11583 pobj RA,for
R7971 T11585 T11576 punct .,reveal

DLUT931

Id Subject Object Predicate Lexical cue
T11891 133-136 Protein denotes A20
T11890 95-103 Protein denotes cytokine
T11889 63-66 Protein denotes TNF
T11888 38-41 Protein denotes TNF
T11887 3-6 Protein denotes A20

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T11727 63-66 http://www.uniprot.org/uniprot/P01375 denotes TNF
T11726 38-41 http://www.uniprot.org/uniprot/P01375 denotes TNF
T11715 133-136 http://www.uniprot.org/uniprot/P21580 denotes A20
T11714 3-6 http://www.uniprot.org/uniprot/P21580 denotes A20

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T9816 133-136 Protein denotes A20
T9815 95-103 Protein denotes cytokine
T9814 63-66 Protein denotes TNF
T9813 38-41 Protein denotes TNF
T9812 3-6 Protein denotes A20

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T10523 177-179 NN denotes RA
T10522 173-176 IN denotes for
T10521 167-172 NN denotes locus
T10520 152-166 NN denotes susceptibility
T10519 142-151 NN denotes candidate
T10518 140-141 DT denotes a
T10517 137-139 IN denotes as
T10516 133-136 NN denotes A20
T10515 126-132 VB denotes reveal
T10514 117-125 NN denotes findings
T10513 111-116 DT denotes these
T10512 109-110 -COMMA- denotes ,
T10511 107-109 NN denotes RA
T10510 104-106 IN denotes in
T10509 95-103 NN denotes cytokine
T10508 82-94 JJ denotes inflammatory
T10507 74-81 JJ denotes primary
T10506 70-73 DT denotes the
T10505 67-69 VB denotes is
T10504 63-66 NN denotes TNF
T10503 59-62 CC denotes and
T10502 57-58 -COMMA- denotes ,
T10501 50-57 NN denotes signals
T10500 38-49 JJ denotes TNF-induced
T10499 35-37 IN denotes of
T10498 23-34 NN denotes termination
T10497 19-22 IN denotes for
T10496 10-18 VB denotes required
T10495 7-9 VB denotes is
T10494 3-6 NN denotes A20
T10493 0-2 IN denotes As
R7094 T10494 T10495 arg1Of A20,is
R7095 T10494 T10496 arg2Of A20,required
R7096 T10496 T10495 arg2Of required,is
R7097 T10496 T10497 arg1Of required,for
R7098 T10496 T10503 arg1Of required,and
R7099 T10498 T10497 arg2Of termination,for
R7100 T10498 T10499 arg1Of termination,of
R7101 T10501 T10499 arg2Of signals,of
R7102 T10501 T10500 arg1Of signals,TNF-induced
R7103 T10503 T10493 arg2Of and,As
R7104 T10503 T10502 arg1Of and,","
R7105 T10504 T10505 arg1Of TNF,is
R7106 T10505 T10503 arg2Of is,and
R7107 T10509 T10505 arg2Of cytokine,is
R7108 T10509 T10506 arg1Of cytokine,the
R7109 T10509 T10507 arg1Of cytokine,primary
R7110 T10509 T10508 arg1Of cytokine,inflammatory
R7111 T10509 T10510 arg1Of cytokine,in
R7112 T10511 T10510 arg2Of RA,in
R7113 T10514 T10513 arg1Of findings,these
R7114 T10514 T10515 arg1Of findings,reveal
R7115 T10515 T10493 arg1Of reveal,As
R7116 T10515 T10512 arg1Of reveal,","
R7117 T10515 T10517 arg1Of reveal,as
R7118 T10516 T10515 arg2Of A20,reveal
R7119 T10521 T10517 arg2Of locus,as
R7120 T10521 T10518 arg1Of locus,a
R7121 T10521 T10519 arg1Of locus,candidate
R7122 T10521 T10520 arg1Of locus,susceptibility
R7123 T10521 T10522 arg1Of locus,for
R7124 T10523 T10522 arg2Of RA,for

GO-BP

Id Subject Object Predicate Lexical cue
T10634 50-57 http://purl.obolibrary.org/obo/GO_0023052 denotes signals

sentences

Id Subject Object Predicate Lexical cue
T9664 0-180 Sentence denotes As A20 is required for termination of TNF-induced signals, and TNF is the primary inflammatory cytokine in RA, these findings reveal A20 as a candidate susceptibility locus for RA.
T121 0-180 Sentence denotes As A20 is required for termination of TNF-induced signals, and TNF is the primary inflammatory cytokine in RA, these findings reveal A20 as a candidate susceptibility locus for RA.

simple1

Id Subject Object Predicate Lexical cue
T10792 133-136 Protein denotes A20
T10791 95-103 Protein denotes cytokine
T10790 63-66 Protein denotes TNF
T10789 38-41 Protein denotes TNF
T10788 3-6 Protein denotes A20

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T12272 42-49 Positive_regulation denotes induced
T12271 10-18 Positive_regulation denotes required
T12238 133-136 Protein denotes A20
T12237 95-103 Protein denotes cytokine
T12236 63-66 Protein denotes TNF
T12235 38-41 Protein denotes TNF
T12234 3-6 Protein denotes A20
R8266 T12234 T12271 themeOf A20,required
R8267 T12235 T12272 themeOf TNF,induced

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T11801 133-136 Protein denotes A20
T11800 95-103 Protein denotes cytokine
T11799 63-66 Protein denotes TNF
T11798 38-41 Protein denotes TNF
T11797 3-6 Protein denotes A20
T11831 10-18 Positive_regulation denotes required
T11830 42-49 Positive_regulation denotes induced
R8078 T11797 T11831 themeOf A20,required
R8079 T11798 T11830 themeOf TNF,induced

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T12400 177-179 Protein denotes RA
T12373 107-109 Protein denotes RA
T12354 3-6 Protein denotes A20
T12320 133-136 Protein denotes A20
T12315 70-109 Protein denotes the primary inflammatory cytokine in RA
T12292 38-49 Protein denotes TNF-induced
T12282 63-66 Protein denotes TNF

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T12008 63-66 Protein denotes TNF
T12007 38-41 Protein denotes TNF
T12006 3-6 Protein denotes A20

test3

Id Subject Object Predicate Lexical cue
T9627 133-136 Protein denotes A20
T9626 95-103 Protein denotes cytokine
T9625 63-66 Protein denotes TNF
T9624 38-41 Protein denotes TNF
T9623 3-6 Protein denotes A20
T9554 133-136 Protein denotes A20
T9553 95-103 Protein denotes cytokine
T9552 63-66 Protein denotes TNF
T9551 38-41 Protein denotes TNF
T9550 3-6 Protein denotes A20