PMC:3218875 / 15167-15914
Annnotations
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3983 | 618-628 | Gene_expression | denotes | production |
T3982 | 585-593 | Positive_regulation | denotes | mediated |
T3981 | 567-575 | Positive_regulation | denotes | required |
T3980 | 302-313 | Protein_catabolism | denotes | proteolysis |
T3979 | 289-294 | Positive_regulation | denotes | leads |
T3978 | 195-203 | Binding | denotes | interact |
T3977 | 156-163 | Binding | denotes | binding |
T3950 | 723-727 | Protein | denotes | CD40 |
T3949 | 683-688 | Protein | denotes | TRAF3 |
T3948 | 636-641 | Protein | denotes | TRAF2 |
T3947 | 613-617 | Protein | denotes | IL-6 |
T3946 | 580-584 | Protein | denotes | CD40 |
T3945 | 558-563 | Protein | denotes | TRAF6 |
T3944 | 509-513 | Protein | denotes | CD40 |
T3943 | 332-337 | Protein | denotes | TRAF3 |
T3942 | 322-327 | Protein | denotes | TRAF2 |
T3941 | 273-278 | Protein | denotes | TRAF6 |
T3940 | 262-267 | Protein | denotes | TRAF5 |
T3939 | 255-260 | Protein | denotes | TRAF3 |
T3938 | 248-253 | Protein | denotes | TRAF2 |
T3937 | 241-246 | Protein | denotes | TRAF1 |
T3936 | 190-194 | Protein | denotes | RANK |
T3935 | 181-185 | Protein | denotes | CD40 |
T3934 | 61-65 | Protein | denotes | RANK |
T3933 | 34-56 | Protein | denotes | lymphotoxin β receptor |
T3932 | 28-32 | Protein | denotes | CD40 |
R2814 | T3935 | T3978 | themeOf | CD40,interact |
R2815 | T3935 | T3977 | themeOf | CD40,binding |
R2816 | T3936 | T3978 | themeOf | RANK,interact |
R2817 | T3937 | T3978 | themeOf | TRAF1,interact |
R2818 | T3938 | T3977 | themeOf | TRAF2,binding |
R2819 | T3938 | T3978 | themeOf | TRAF2,interact |
R2820 | T3939 | T3977 | themeOf | TRAF3,binding |
R2821 | T3939 | T3978 | themeOf | TRAF3,interact |
R2822 | T3940 | T3978 | themeOf | TRAF5,interact |
R2823 | T3940 | T3977 | themeOf | TRAF5,binding |
R2824 | T3941 | T3977 | themeOf | TRAF6,binding |
R2825 | T3941 | T3978 | themeOf | TRAF6,interact |
R2826 | T3942 | T3980 | themeOf | TRAF2,proteolysis |
R2827 | T3943 | T3980 | themeOf | TRAF3,proteolysis |
R2828 | T3945 | T3981 | causeOf | TRAF6,required |
R2829 | T3946 | T3982 | causeOf | CD40,mediated |
R2830 | T3947 | T3983 | themeOf | IL-6,production |
R2836 | T3977 | T3979 | causeOf | binding,leads |
R2837 | T3978 | T3979 | causeOf | interact,leads |
R2838 | T3980 | T3979 | themeOf | proteolysis,leads |
R2839 | T3982 | T3981 | themeOf | mediated,required |
R2840 | T3983 | T3982 | themeOf | production,mediated |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6864 | 746-747 | . | denotes | . |
T6863 | 745-746 | NNP | denotes | ] |
T6862 | 740-745 | CD | denotes | 30,31 |
T6861 | 739-740 | NNP | denotes | [ |
T6860 | 728-738 | VBG | denotes | signalling |
T6859 | 723-727 | NNP | denotes | CD40 |
T6858 | 720-722 | IN | denotes | of |
T6857 | 710-719 | NN | denotes | regulator |
T6856 | 701-709 | JJ | denotes | negative |
T6855 | 699-700 | DT | denotes | a |
T6854 | 696-698 | IN | denotes | as |
T6853 | 689-695 | VBZ | denotes | serves |
T6852 | 683-688 | CD | denotes | TRAF3 |
T6851 | 679-682 | CC | denotes | and |
T6850 | 677-678 | , | denotes | , |
T6849 | 672-677 | NNP | denotes | NF-κB |
T6848 | 669-671 | IN | denotes | of |
T6847 | 658-668 | NN | denotes | activation |
T6846 | 654-657 | IN | denotes | for |
T6845 | 645-653 | VBN | denotes | required |
T6844 | 642-644 | VBZ | denotes | is |
T6843 | 636-641 | CD | denotes | TRAF2 |
T6842 | 630-635 | IN | denotes | while |
T6841 | 628-629 | , | denotes | , |
T6840 | 618-628 | NN | denotes | production |
T6839 | 613-617 | NN | denotes | IL-6 |
T6838 | 609-612 | CC | denotes | and |
T6837 | 598-608 | NN | denotes | activation |
T6836 | 594-597 | NNP | denotes | JNK |
T6835 | 580-593 | JJ | denotes | CD40-mediated |
T6834 | 576-579 | IN | denotes | for |
T6833 | 567-575 | VBN | denotes | required |
T6832 | 564-566 | VBZ | denotes | is |
T6831 | 558-563 | NNP | denotes | TRAF6 |
T6830 | 552-557 | NNS | denotes | cells |
T6829 | 550-551 | NNP | denotes | B |
T6828 | 547-549 | IN | denotes | in |
T6827 | 545-546 | , | denotes | , |
T6826 | 538-545 | NN | denotes | example |
T6825 | 534-537 | IN | denotes | For |
T6824 | 532-533 | . | denotes | . |
T6823 | 523-532 | NNS | denotes | functions |
T6822 | 509-522 | JJ | denotes | CD40-mediated |
T6821 | 500-508 | JJ | denotes | distinct |
T6820 | 496-499 | CC | denotes | and |
T6819 | 484-495 | VBG | denotes | overlapping |
T6818 | 479-483 | IN | denotes | with |
T6817 | 468-478 | VBN | denotes | associated |
T6816 | 464-467 | VBP | denotes | are |
T6815 | 454-463 | NNS | denotes | molecules |
T6814 | 449-453 | NNP | denotes | TRAF |
T6813 | 440-448 | JJ | denotes | Specific |
T6812 | 438-439 | . | denotes | . |
T6811 | 433-438 | IN | denotes | above |
T6810 | 423-432 | VBN | denotes | described |
T6809 | 420-422 | IN | denotes | as |
T6808 | 412-419 | NN | denotes | pathway |
T6807 | 399-411 | JJ | denotes | noncanonical |
T6806 | 395-398 | DT | denotes | the |
T6805 | 392-394 | IN | denotes | of |
T6804 | 381-391 | NN | denotes | activation |
T6803 | 377-380 | DT | denotes | the |
T6802 | 374-376 | IN | denotes | in |
T6801 | 369-373 | NN | denotes | step |
T6800 | 359-368 | JJ | denotes | important |
T6799 | 356-358 | DT | denotes | an |
T6798 | 345-355 | VBZ | denotes | represents |
T6797 | 339-344 | WDT | denotes | which |
T6796 | 337-338 | , | denotes | , |
T6795 | 332-337 | CD | denotes | TRAF3 |
T6794 | 328-331 | CC | denotes | and |
T6793 | 322-327 | CD | denotes | TRAF2 |
T6792 | 317-321 | DT | denotes | both |
T6791 | 314-316 | IN | denotes | of |
T6790 | 302-313 | NN | denotes | proteolysis |
T6789 | 298-301 | DT | denotes | the |
T6788 | 295-297 | TO | denotes | to |
T6787 | 289-294 | VBZ | denotes | leads |
T6786 | 284-288 | DT | denotes | this |
T6785 | 280-283 | CC | denotes | and |
T6784 | 278-279 | , | denotes | , |
T6783 | 273-278 | NNP | denotes | TRAF6 |
T6782 | 269-272 | CC | denotes | and |
T6781 | 267-268 | , | denotes | , |
T6780 | 262-267 | CD | denotes | TRAF5 |
T6779 | 260-261 | , | denotes | , |
T6778 | 255-260 | CD | denotes | TRAF3 |
T6777 | 253-254 | , | denotes | , |
T6776 | 248-253 | CD | denotes | TRAF2 |
T6775 | 246-247 | , | denotes | , |
T6774 | 241-246 | CD | denotes | TRAF1 |
T6773 | 231-240 | VBG | denotes | including |
T6772 | 229-230 | , | denotes | , |
T6771 | 222-229 | NNS | denotes | members |
T6770 | 217-221 | NNP | denotes | TRAF |
T6769 | 209-216 | JJ | denotes | several |
T6768 | 204-208 | IN | denotes | with |
T6767 | 195-203 | NN | denotes | interact |
T6766 | 190-194 | NNP | denotes | RANK |
T6765 | 186-189 | CC | denotes | and |
T6764 | 181-185 | NNP | denotes | CD40 |
T6763 | 179-180 | , | denotes | , |
T6762 | 173-179 | NN | denotes | ligand |
T6761 | 167-172 | PRP$ | denotes | their |
T6760 | 164-166 | IN | denotes | of |
T6759 | 156-163 | JJ | denotes | binding |
T6758 | 151-155 | IN | denotes | Upon |
T6757 | 149-150 | . | denotes | . |
T6756 | 141-149 | NNS | denotes | pathways |
T6755 | 130-140 | VBG | denotes | signalling |
T6754 | 124-129 | NN | denotes | NF-κB |
T6753 | 111-123 | JJ | denotes | noncanonical |
T6752 | 107-110 | CC | denotes | and |
T6751 | 97-106 | JJ | denotes | canonical |
T6750 | 92-96 | DT | denotes | both |
T6749 | 89-91 | IN | denotes | of |
T6748 | 78-88 | NN | denotes | activation |
T6747 | 74-77 | DT | denotes | the |
T6746 | 66-73 | VB | denotes | mediate |
T6745 | 61-65 | VB | denotes | RANK |
T6744 | 57-60 | CC | denotes | and |
T6743 | 48-56 | NN | denotes | receptor |
T6742 | 46-47 | NN | denotes | β |
T6741 | 34-45 | NN | denotes | lymphotoxin |
T6740 | 32-33 | , | denotes | , |
T6739 | 28-32 | NNP | denotes | CD40 |
T6738 | 23-27 | IN | denotes | that |
T6737 | 13-22 | VBN | denotes | mentioned |
T6736 | 10-12 | VB | denotes | be |
T6735 | 3-9 | MD | denotes | should |
T6734 | 0-2 | PRP | denotes | It |
R4788 | T6734 | T6737 | nsubjpass | It,mentioned |
R4791 | T6735 | T6737 | aux | should,mentioned |
R4794 | T6736 | T6737 | auxpass | be,mentioned |
R4799 | T6737 | T6737 | ROOT | mentioned,mentioned |
R4800 | T6738 | T6746 | mark | that,mediate |
R4801 | T6739 | T6746 | nsubj | CD40,mediate |
R4802 | T6830 | T6828 | pobj | cells,in |
R4803 | T6831 | T6833 | nsubjpass | TRAF6,required |
R4804 | T6740 | T6739 | punct | ",",CD40 |
R4805 | T6832 | T6833 | auxpass | is,required |
R4806 | T6833 | T6833 | ROOT | required,required |
R4807 | T6834 | T6833 | prep | for,required |
R4808 | T6835 | T6837 | amod | CD40-mediated,activation |
R4809 | T6741 | T6743 | nmod | lymphotoxin,receptor |
R4810 | T6836 | T6837 | compound | JNK,activation |
R4811 | T6837 | T6834 | pobj | activation,for |
R4812 | T6742 | T6743 | compound | β,receptor |
R4813 | T6838 | T6837 | cc | and,activation |
R4814 | T6839 | T6837 | conj | IL-6,activation |
R4815 | T6840 | T6837 | conj | production,activation |
R4816 | T6743 | T6739 | appos | receptor,CD40 |
R4817 | T6841 | T6833 | punct | ",",required |
R4818 | T6842 | T6845 | mark | while,required |
R4819 | T6843 | T6845 | nsubjpass | TRAF2,required |
R4820 | T6744 | T6743 | cc | and,receptor |
R4821 | T6844 | T6845 | auxpass | is,required |
R4822 | T6845 | T6833 | advcl | required,required |
R4823 | T6846 | T6845 | prep | for,required |
R4824 | T6745 | T6743 | conj | RANK,receptor |
R4825 | T6847 | T6846 | pobj | activation,for |
R4826 | T6848 | T6847 | prep | of,activation |
R4827 | T6849 | T6848 | pobj | NF-κB,of |
R4828 | T6746 | T6737 | ccomp | mediate,mentioned |
R4829 | T6850 | T6845 | punct | ",",required |
R4830 | T6851 | T6833 | cc | and,required |
R4831 | T6747 | T6748 | det | the,activation |
R4832 | T6852 | T6853 | nsubj | TRAF3,serves |
R4833 | T6853 | T6833 | conj | serves,required |
R4834 | T6854 | T6853 | prep | as,serves |
R4835 | T6748 | T6746 | dobj | activation,mediate |
R4836 | T6855 | T6857 | det | a,regulator |
R4837 | T6856 | T6857 | amod | negative,regulator |
R4838 | T6749 | T6748 | prep | of,activation |
R4839 | T6857 | T6854 | pobj | regulator,as |
R4840 | T6858 | T6857 | prep | of,regulator |
R4841 | T6859 | T6860 | nsubj | CD40,signalling |
R4842 | T6750 | T6751 | preconj | both,canonical |
R4843 | T6860 | T6858 | pcomp | signalling,of |
R4844 | T6861 | T6863 | compound | [,] |
R4845 | T6751 | T6756 | amod | canonical,pathways |
R4846 | T6862 | T6863 | compound | "30,31",] |
R4847 | T6863 | T6860 | dobj | ],signalling |
R4848 | T6864 | T6853 | punct | .,serves |
R4849 | T6752 | T6751 | cc | and,canonical |
R4850 | T6753 | T6751 | conj | noncanonical,canonical |
R4851 | T6754 | T6755 | npadvmod | NF-κB,signalling |
R4852 | T6755 | T6756 | amod | signalling,pathways |
R4853 | T6756 | T6749 | pobj | pathways,of |
R4854 | T6757 | T6737 | punct | .,mentioned |
R4855 | T6758 | T6787 | prep | Upon,leads |
R4856 | T6759 | T6758 | pobj | binding,Upon |
R4857 | T6760 | T6759 | prep | of,binding |
R4858 | T6761 | T6762 | poss | their,ligand |
R4859 | T6762 | T6760 | pobj | ligand,of |
R4860 | T6763 | T6762 | punct | ",",ligand |
R4861 | T6764 | T6762 | appos | CD40,ligand |
R4862 | T6765 | T6764 | cc | and,CD40 |
R4863 | T6766 | T6767 | compound | RANK,interact |
R4864 | T6767 | T6787 | nsubj | interact,leads |
R4865 | T6768 | T6767 | prep | with,interact |
R4866 | T6769 | T6771 | amod | several,members |
R4867 | T6770 | T6771 | compound | TRAF,members |
R4868 | T6771 | T6768 | pobj | members,with |
R4869 | T6772 | T6771 | punct | ",",members |
R4870 | T6773 | T6771 | prep | including,members |
R4871 | T6774 | T6773 | pobj | TRAF1,including |
R4872 | T6775 | T6774 | punct | ",",TRAF1 |
R4873 | T6776 | T6774 | conj | TRAF2,TRAF1 |
R4874 | T6777 | T6771 | punct | ",",members |
R4875 | T6778 | T6771 | appos | TRAF3,members |
R4876 | T6779 | T6778 | punct | ",",TRAF3 |
R4877 | T6780 | T6778 | conj | TRAF5,TRAF3 |
R4878 | T6781 | T6767 | punct | ",",interact |
R4879 | T6782 | T6767 | cc | and,interact |
R4880 | T6783 | T6767 | conj | TRAF6,interact |
R4881 | T6784 | T6783 | punct | ",",TRAF6 |
R4882 | T6785 | T6783 | cc | and,TRAF6 |
R4883 | T6786 | T6787 | nsubj | this,leads |
R4884 | T6787 | T6787 | ROOT | leads,leads |
R4885 | T6788 | T6787 | prep | to,leads |
R4886 | T6789 | T6790 | det | the,proteolysis |
R4887 | T6790 | T6788 | pobj | proteolysis,to |
R4888 | T6791 | T6790 | prep | of,proteolysis |
R4889 | T6792 | T6793 | det | both,TRAF2 |
R4890 | T6793 | T6791 | pobj | TRAF2,of |
R4891 | T6794 | T6793 | cc | and,TRAF2 |
R4892 | T6795 | T6793 | conj | TRAF3,TRAF2 |
R4893 | T6796 | T6790 | punct | ",",proteolysis |
R4894 | T6797 | T6798 | nsubj | which,represents |
R4895 | T6798 | T6790 | relcl | represents,proteolysis |
R4896 | T6799 | T6801 | det | an,step |
R4897 | T6800 | T6801 | amod | important,step |
R4898 | T6801 | T6798 | dobj | step,represents |
R4899 | T6802 | T6801 | prep | in,step |
R4900 | T6803 | T6804 | det | the,activation |
R4901 | T6804 | T6802 | pobj | activation,in |
R4902 | T6805 | T6804 | prep | of,activation |
R4904 | T6806 | T6808 | det | the,pathway |
R4908 | T6807 | T6808 | amod | noncanonical,pathway |
R4912 | T6808 | T6805 | pobj | pathway,of |
R4914 | T6809 | T6810 | mark | as,described |
R4917 | T6810 | T6798 | advcl | described,represents |
R4918 | T6811 | T6810 | advmod | above,described |
R4920 | T6812 | T6787 | punct | .,leads |
R4921 | T6813 | T6815 | amod | Specific,molecules |
R4923 | T6814 | T6815 | compound | TRAF,molecules |
R4926 | T6815 | T6817 | nsubjpass | molecules,associated |
R4929 | T6816 | T6817 | auxpass | are,associated |
R4931 | T6817 | T6817 | ROOT | associated,associated |
R4934 | T6818 | T6817 | prep | with,associated |
R4938 | T6819 | T6818 | pobj | overlapping,with |
R4941 | T6820 | T6819 | cc | and,overlapping |
R4943 | T6821 | T6823 | amod | distinct,functions |
R4948 | T6822 | T6823 | amod | CD40-mediated,functions |
R4949 | T6823 | T6819 | conj | functions,overlapping |
R4950 | T6824 | T6817 | punct | .,associated |
R4951 | T6825 | T6833 | prep | For,required |
R4953 | T6826 | T6825 | pobj | example,For |
R4955 | T6827 | T6833 | punct | ",",required |
R4957 | T6828 | T6833 | prep | in,required |
R4958 | T6829 | T6830 | compound | B,cells |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7194 | 723-727 | Protein | denotes | CD40 |
T7193 | 683-688 | Protein | denotes | TRAF3 |
T7192 | 636-641 | Protein | denotes | TRAF2 |
T7191 | 613-617 | Protein | denotes | IL-6 |
T7190 | 580-584 | Protein | denotes | CD40 |
T7189 | 558-563 | Protein | denotes | TRAF6 |
T7188 | 509-513 | Protein | denotes | CD40 |
T7187 | 332-337 | Protein | denotes | TRAF3 |
T7186 | 322-327 | Protein | denotes | TRAF2 |
T7185 | 273-278 | Protein | denotes | TRAF6 |
T7184 | 262-267 | Protein | denotes | TRAF5 |
T7183 | 255-260 | Protein | denotes | TRAF3 |
T7182 | 248-253 | Protein | denotes | TRAF2 |
T7181 | 241-246 | Protein | denotes | TRAF1 |
T7180 | 190-194 | Protein | denotes | RANK |
T7179 | 181-185 | Protein | denotes | CD40 |
T7178 | 61-65 | Protein | denotes | RANK |
T7177 | 34-56 | Protein | denotes | lymphotoxin β receptor |
T7176 | 28-32 | Protein | denotes | CD40 |
T7233 | 585-593 | Positive_regulation | denotes | mediated |
T7232 | 567-575 | Positive_regulation | denotes | required |
T7231 | 618-628 | Gene_expression | denotes | production |
T7230 | 514-522 | Positive_regulation | denotes | mediated |
T7229 | 156-163 | Binding | denotes | binding |
R5095 | T7179 | T7229 | themeOf | CD40,binding |
R5096 | T7182 | T7229 | themeOf | TRAF2,binding |
R5098 | T7188 | T7230 | themeOf | CD40,mediated |
R5099 | T7189 | T7232 | causeOf | TRAF6,required |
R5100 | T7190 | T7233 | causeOf | CD40,mediated |
R5101 | T7191 | T7231 | themeOf | IL-6,production |
R5113 | T7231 | T7232 | themeOf | production,required |
R5114 | T7231 | T7233 | themeOf | production,mediated |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6911 | 636-641 | http://www.uniprot.org/uniprot/Q12933 | denotes | TRAF2 |
T6910 | 322-327 | http://www.uniprot.org/uniprot/Q12933 | denotes | TRAF2 |
T6909 | 248-253 | http://www.uniprot.org/uniprot/Q12933 | denotes | TRAF2 |
T6941 | 613-617 | http://www.uniprot.org/uniprot/P05231 | denotes | IL-6 |
T6940 | 173-185 | http://www.uniprot.org/uniprot/P29965 | denotes | ligand, CD40 |
T6939 | 683-688 | http://www.uniprot.org/uniprot/Q13114 | denotes | TRAF3 |
T6938 | 332-337 | http://www.uniprot.org/uniprot/Q13114 | denotes | TRAF3 |
T6937 | 255-260 | http://www.uniprot.org/uniprot/Q13114 | denotes | TRAF3 |
T6926 | 723-727 | http://www.uniprot.org/uniprot/P25942 | denotes | CD40 |
T6925 | 580-584 | http://www.uniprot.org/uniprot/P25942 | denotes | CD40 |
T6924 | 509-513 | http://www.uniprot.org/uniprot/P25942 | denotes | CD40 |
T6923 | 181-185 | http://www.uniprot.org/uniprot/P25942 | denotes | CD40 |
T6922 | 28-32 | http://www.uniprot.org/uniprot/P25942 | denotes | CD40 |
T6920 | 558-563 | http://www.uniprot.org/uniprot/Q9Y4K3 | denotes | TRAF6 |
T6919 | 273-278 | http://www.uniprot.org/uniprot/Q9Y4K3 | denotes | TRAF6 |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4563 | 322-327 | Protein | denotes | TRAF2 |
T4562 | 273-278 | Protein | denotes | TRAF6 |
T4561 | 262-267 | Protein | denotes | TRAF5 |
T4560 | 255-260 | Protein | denotes | TRAF3 |
T4559 | 248-253 | Protein | denotes | TRAF2 |
T4558 | 241-246 | Protein | denotes | TRAF1 |
T4557 | 190-194 | Protein | denotes | RANK |
T4556 | 181-185 | Protein | denotes | CD40 |
T4555 | 61-65 | Protein | denotes | RANK |
T4554 | 34-56 | Protein | denotes | lymphotoxin β receptor |
T4553 | 28-32 | Protein | denotes | CD40 |
T4566 | 558-563 | Protein | denotes | TRAF6 |
T4565 | 509-513 | Protein | denotes | CD40 |
T4564 | 332-337 | Protein | denotes | TRAF3 |
T4571 | 723-727 | Protein | denotes | CD40 |
T4570 | 683-688 | Protein | denotes | TRAF3 |
T4569 | 636-641 | Protein | denotes | TRAF2 |
T4568 | 613-617 | Protein | denotes | IL-6 |
T4567 | 580-584 | Protein | denotes | CD40 |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
21639951-21041727-4289459 | 740-742 | 21041727 | denotes | 30 |
21639951-20348096-4289460 | 743-745 | 20348096 | denotes | 31 |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5414 | 289-294 | VB | denotes | leads |
T5413 | 284-288 | DT | denotes | this |
T5412 | 280-283 | CC | denotes | and |
T5411 | 278-279 | -COMMA- | denotes | , |
T5410 | 273-278 | NN | denotes | TRAF6 |
T5409 | 269-272 | CC | denotes | and |
T5408 | 267-268 | -COMMA- | denotes | , |
T5407 | 262-267 | NN | denotes | TRAF5 |
T5406 | 260-261 | -COMMA- | denotes | , |
T5405 | 255-260 | NN | denotes | TRAF3 |
T5404 | 253-254 | -COMMA- | denotes | , |
T5403 | 248-253 | NN | denotes | TRAF2 |
T5402 | 246-247 | -COMMA- | denotes | , |
T5401 | 241-246 | NN | denotes | TRAF1 |
T5400 | 231-240 | VB | denotes | including |
T5399 | 229-230 | -COMMA- | denotes | , |
T5398 | 222-229 | NN | denotes | members |
T5397 | 217-221 | NN | denotes | TRAF |
T5396 | 209-216 | JJ | denotes | several |
T5395 | 204-208 | IN | denotes | with |
T5394 | 195-203 | VB | denotes | interact |
T5393 | 190-194 | NN | denotes | RANK |
T5392 | 186-189 | CC | denotes | and |
T5391 | 181-185 | NN | denotes | CD40 |
T5390 | 179-180 | -COMMA- | denotes | , |
T5389 | 173-179 | NN | denotes | ligand |
T5388 | 167-172 | PRP-DOLLAR- | denotes | their |
T5387 | 164-166 | IN | denotes | of |
T5386 | 156-163 | NN | denotes | binding |
T5385 | 151-155 | IN | denotes | Upon |
T5384 | 141-149 | NN | denotes | pathways |
T5383 | 130-140 | NN | denotes | signalling |
T5382 | 124-129 | NN | denotes | NF-κB |
T5381 | 111-123 | JJ | denotes | noncanonical |
T5380 | 107-110 | CC | denotes | and |
T5379 | 97-106 | JJ | denotes | canonical |
T5378 | 92-96 | CC | denotes | both |
T5377 | 89-91 | IN | denotes | of |
T5376 | 78-88 | NN | denotes | activation |
T5375 | 74-77 | DT | denotes | the |
T5374 | 66-73 | VB | denotes | mediate |
T5373 | 61-65 | NN | denotes | RANK |
T5372 | 57-60 | CC | denotes | and |
T5371 | 48-56 | NN | denotes | receptor |
T5370 | 46-47 | NN | denotes | β |
T5369 | 34-45 | NN | denotes | lymphotoxin |
T5368 | 32-33 | -COMMA- | denotes | , |
T5367 | 28-32 | NN | denotes | CD40 |
T5366 | 23-27 | IN | denotes | that |
T5365 | 13-22 | VB | denotes | mentioned |
T5364 | 10-12 | VB | denotes | be |
T5363 | 3-9 | MD | denotes | should |
T5362 | 0-2 | PRP | denotes | It |
T5488 | 745-746 | -RRB- | denotes | ] |
T5487 | 740-745 | CD | denotes | 30,31 |
T5486 | 739-740 | -LRB- | denotes | [ |
T5485 | 728-738 | NN | denotes | signalling |
T5484 | 723-727 | NN | denotes | CD40 |
T5483 | 720-722 | IN | denotes | of |
T5482 | 710-719 | NN | denotes | regulator |
T5481 | 701-709 | JJ | denotes | negative |
T5480 | 699-700 | DT | denotes | a |
T5479 | 696-698 | IN | denotes | as |
T5478 | 689-695 | VB | denotes | serves |
T5477 | 683-688 | NN | denotes | TRAF3 |
T5476 | 679-682 | CC | denotes | and |
T5475 | 677-678 | -COMMA- | denotes | , |
T5474 | 672-677 | NN | denotes | NF-κB |
T5473 | 669-671 | IN | denotes | of |
T5472 | 658-668 | NN | denotes | activation |
T5471 | 654-657 | IN | denotes | for |
T5470 | 645-653 | VB | denotes | required |
T5469 | 642-644 | VB | denotes | is |
T5468 | 636-641 | NN | denotes | TRAF2 |
T5467 | 630-635 | IN | denotes | while |
T5466 | 628-629 | -COMMA- | denotes | , |
T5465 | 618-628 | NN | denotes | production |
T5464 | 613-617 | NN | denotes | IL-6 |
T5463 | 609-612 | CC | denotes | and |
T5462 | 598-608 | NN | denotes | activation |
T5461 | 594-597 | NN | denotes | JNK |
T5460 | 580-593 | JJ | denotes | CD40-mediated |
T5459 | 576-579 | IN | denotes | for |
T5458 | 567-575 | VB | denotes | required |
T5457 | 564-566 | VB | denotes | is |
T5456 | 558-563 | NN | denotes | TRAF6 |
T5455 | 552-557 | NN | denotes | cells |
T5454 | 550-551 | NN | denotes | B |
T5453 | 547-549 | IN | denotes | in |
T5452 | 545-546 | -COMMA- | denotes | , |
T5451 | 538-545 | NN | denotes | example |
T5450 | 534-537 | IN | denotes | For |
T5449 | 523-532 | NN | denotes | functions |
T5448 | 509-522 | JJ | denotes | CD40-mediated |
T5447 | 500-508 | JJ | denotes | distinct |
T5446 | 496-499 | CC | denotes | and |
T5445 | 484-495 | VB | denotes | overlapping |
T5444 | 479-483 | IN | denotes | with |
T5443 | 468-478 | VB | denotes | associated |
T5442 | 464-467 | VB | denotes | are |
T5441 | 454-463 | NN | denotes | molecules |
T5440 | 449-453 | NN | denotes | TRAF |
T5439 | 440-448 | JJ | denotes | Specific |
T5438 | 433-438 | RB | denotes | above |
T5437 | 423-432 | VB | denotes | described |
T5436 | 420-422 | IN | denotes | as |
T5435 | 412-419 | NN | denotes | pathway |
T5434 | 399-411 | JJ | denotes | noncanonical |
T5433 | 395-398 | DT | denotes | the |
T5432 | 392-394 | IN | denotes | of |
T5431 | 381-391 | NN | denotes | activation |
T5430 | 377-380 | DT | denotes | the |
T5429 | 374-376 | IN | denotes | in |
T5428 | 369-373 | NN | denotes | step |
T5427 | 359-368 | JJ | denotes | important |
T5426 | 356-358 | DT | denotes | an |
T5425 | 345-355 | VB | denotes | represents |
T5424 | 339-344 | WDT | denotes | which |
T5423 | 337-338 | -COMMA- | denotes | , |
T5422 | 332-337 | NN | denotes | TRAF3 |
T5421 | 328-331 | CC | denotes | and |
T5420 | 322-327 | NN | denotes | TRAF2 |
T5419 | 317-321 | CC | denotes | both |
T5418 | 314-316 | IN | denotes | of |
T5417 | 302-313 | NN | denotes | proteolysis |
T5416 | 298-301 | DT | denotes | the |
T5415 | 295-297 | TO | denotes | to |
R3886 | T5372 | T5374 | arg1Of | and,mediate |
R3887 | T5431 | T5429 | arg2Of | activation,in |
R3888 | T5431 | T5430 | arg1Of | activation,the |
R3889 | T5431 | T5432 | arg1Of | activation,of |
R3890 | T5435 | T5432 | arg2Of | pathway,of |
R3827 | T5389 | T5387 | arg2Of | ligand,of |
R3828 | T5389 | T5388 | arg1Of | ligand,their |
R3830 | T5391 | T5392 | arg1Of | CD40,and |
R3832 | T5392 | T5394 | arg1Of | and,interact |
R3833 | T5393 | T5392 | arg2Of | RANK,and |
R3835 | T5394 | T5395 | arg1Of | interact,with |
R3837 | T5394 | T5412 | arg1Of | interact,and |
R3839 | T5398 | T5395 | arg2Of | members,with |
R3840 | T5398 | T5396 | arg1Of | members,several |
R3841 | T5398 | T5397 | arg1Of | members,TRAF |
R3842 | T5398 | T5399 | arg1Of | members,"," |
R3843 | T5398 | T5400 | arg1Of | members,including |
R3844 | T5401 | T5402 | arg1Of | TRAF1,"," |
R3845 | T5402 | T5404 | arg1Of | ",","," |
R3846 | T5403 | T5402 | arg2Of | TRAF2,"," |
R3848 | T5404 | T5406 | arg1Of | ",","," |
R3850 | T5405 | T5404 | arg2Of | TRAF3,"," |
R3851 | T5406 | T5409 | arg1Of | ",",and |
R3852 | T5407 | T5406 | arg2Of | TRAF5,"," |
R3853 | T5362 | T5363 | arg1Of | It,should |
R3854 | T5409 | T5400 | arg2Of | and,including |
R3855 | T5409 | T5408 | arg1Of | and,"," |
R3856 | T5410 | T5409 | arg2Of | TRAF6,and |
R3857 | T5362 | T5364 | arg1Of | It,be |
R3858 | T5412 | T5385 | arg1Of | and,Upon |
R3859 | T5412 | T5390 | arg1Of | and,"," |
R3860 | T5412 | T5411 | arg1Of | and,"," |
R3861 | T5364 | T5363 | arg2Of | be,should |
R3862 | T5413 | T5414 | arg1Of | this,leads |
R3863 | T5414 | T5412 | arg2Of | leads,and |
R3864 | T5414 | T5415 | arg1Of | leads,to |
R3865 | T5367 | T5364 | arg2Of | CD40,be |
R3866 | T5417 | T5415 | arg2Of | proteolysis,to |
R3867 | T5417 | T5416 | arg1Of | proteolysis,the |
R3868 | T5417 | T5418 | arg1Of | proteolysis,of |
R3869 | T5417 | T5423 | arg1Of | proteolysis,"," |
R3870 | T5417 | T5424 | arg1Of | proteolysis,which |
R3871 | T5417 | T5425 | arg1Of | proteolysis,represents |
R3872 | T5420 | T5421 | arg1Of | TRAF2,and |
R3873 | T5421 | T5418 | arg2Of | and,of |
R3874 | T5421 | T5419 | arg1Of | and,both |
R3875 | T5422 | T5421 | arg2Of | TRAF3,and |
R3876 | T5367 | T5365 | arg2Of | CD40,mentioned |
R3877 | T5425 | T5436 | arg1Of | represents,as |
R3878 | T5367 | T5366 | arg1Of | CD40,that |
R3879 | T5371 | T5372 | arg1Of | receptor,and |
R3880 | T5428 | T5425 | arg2Of | step,represents |
R3881 | T5428 | T5426 | arg1Of | step,an |
R3882 | T5428 | T5427 | arg1Of | step,important |
R3883 | T5428 | T5429 | arg1Of | step,in |
R3884 | T5372 | T5369 | arg1Of | and,lymphotoxin |
R3885 | T5372 | T5370 | arg1Of | and,β |
R3891 | T5435 | T5433 | arg1Of | pathway,the |
R3892 | T5435 | T5434 | arg1Of | pathway,noncanonical |
R3893 | T5373 | T5372 | arg2Of | RANK,and |
R3894 | T5437 | T5436 | arg2Of | described,as |
R3895 | T5437 | T5438 | arg1Of | described,above |
R3896 | T5374 | T5363 | modOf | mediate,should |
R3897 | T5441 | T5439 | arg1Of | molecules,Specific |
R3898 | T5441 | T5440 | arg1Of | molecules,TRAF |
R3899 | T5441 | T5442 | arg1Of | molecules,are |
R3900 | T5441 | T5443 | arg2Of | molecules,associated |
R3901 | T5443 | T5442 | arg2Of | associated,are |
R3902 | T5443 | T5444 | arg1Of | associated,with |
R3903 | T5374 | T5368 | arg1Of | mediate,"," |
R3904 | T5376 | T5374 | arg2Of | activation,mediate |
R3905 | T5376 | T5375 | arg1Of | activation,the |
R3906 | T5449 | T5444 | arg2Of | functions,with |
R3907 | T5449 | T5445 | arg1Of | functions,overlapping |
R3908 | T5449 | T5446 | arg1Of | functions,and |
R3909 | T5449 | T5447 | arg1Of | functions,distinct |
R3910 | T5449 | T5448 | arg1Of | functions,CD40-mediated |
R3911 | T5376 | T5377 | arg1Of | activation,of |
R3912 | T5451 | T5450 | arg2Of | example,For |
R3913 | T5379 | T5380 | arg1Of | canonical,and |
R3914 | T5455 | T5453 | arg2Of | cells,in |
R3915 | T5455 | T5454 | arg1Of | cells,B |
R3916 | T5456 | T5457 | arg1Of | TRAF6,is |
R3917 | T5456 | T5458 | arg2Of | TRAF6,required |
R3918 | T5380 | T5378 | arg1Of | and,both |
R3919 | T5458 | T5457 | arg2Of | required,is |
R3920 | T5458 | T5459 | arg1Of | required,for |
R3921 | T5458 | T5466 | arg1Of | required,"," |
R3922 | T5458 | T5467 | arg1Of | required,while |
R3923 | T5458 | T5476 | arg1Of | required,and |
R3924 | T5381 | T5380 | arg2Of | noncanonical,and |
R3925 | T5462 | T5460 | arg1Of | activation,CD40-mediated |
R3926 | T5462 | T5461 | arg1Of | activation,JNK |
R3927 | T5462 | T5463 | arg1Of | activation,and |
R3928 | T5463 | T5459 | arg2Of | and,for |
R3929 | T5384 | T5377 | arg2Of | pathways,of |
R3930 | T5465 | T5463 | arg2Of | production,and |
R3931 | T5465 | T5464 | arg1Of | production,IL-6 |
R3932 | T5468 | T5469 | arg1Of | TRAF2,is |
R3933 | T5468 | T5470 | arg2Of | TRAF2,required |
R3934 | T5470 | T5467 | arg2Of | required,while |
R3935 | T5470 | T5469 | arg2Of | required,is |
R3936 | T5470 | T5471 | arg1Of | required,for |
R3937 | T5384 | T5379 | arg1Of | pathways,canonical |
R3938 | T5472 | T5471 | arg2Of | activation,for |
R3939 | T5472 | T5473 | arg1Of | activation,of |
R3940 | T5474 | T5473 | arg2Of | NF-κB,of |
R3941 | T5476 | T5450 | arg1Of | and,For |
R3942 | T5476 | T5452 | arg1Of | and,"," |
R3943 | T5476 | T5453 | arg1Of | and,in |
R3944 | T5476 | T5475 | arg1Of | and,"," |
R3945 | T5477 | T5478 | arg1Of | TRAF3,serves |
R3946 | T5384 | T5381 | arg1Of | pathways,noncanonical |
R3947 | T5478 | T5476 | arg2Of | serves,and |
R3948 | T5478 | T5479 | arg1Of | serves,as |
R3949 | T5384 | T5382 | arg1Of | pathways,NF-κB |
R3950 | T5384 | T5383 | arg1Of | pathways,signalling |
R3951 | T5386 | T5385 | arg2Of | binding,Upon |
R3952 | T5478 | T5486 | arg1Of | serves,[ |
R3953 | T5386 | T5387 | arg1Of | binding,of |
R3954 | T5485 | T5483 | arg2Of | signalling,of |
R3955 | T5482 | T5479 | arg2Of | regulator,as |
R3956 | T5482 | T5480 | arg1Of | regulator,a |
R3957 | T5482 | T5481 | arg1Of | regulator,negative |
R3958 | T5482 | T5483 | arg1Of | regulator,of |
R3959 | T5485 | T5484 | arg1Of | signalling,CD40 |
R3960 | T5487 | T5486 | arg2Of | "30,31",[ |
R3961 | T5488 | T5486 | arg3Of | ],[ |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5606 | 613-628 | http://purl.obolibrary.org/obo/GO_0032675 | denotes | IL-6 production |
T5605 | 613-628 | http://purl.obolibrary.org/obo/GO_0032635 | denotes | IL-6 production |
T5604 | 594-597 | http://purl.obolibrary.org/obo/GO_0004705 | denotes | JNK |
T5603 | 302-313 | http://purl.obolibrary.org/obo/GO_0006508 | denotes | proteolysis |
T5602 | 111-140 | http://purl.obolibrary.org/obo/GO_1901222 | denotes | noncanonical NF-κB signalling |
T5601 | 111-140 | http://purl.obolibrary.org/obo/GO_1901223 | denotes | noncanonical NF-κB signalling |
T5586 | 111-140 | http://purl.obolibrary.org/obo/GO_1901224 | denotes | noncanonical NF-κB signalling |
T5529 | 658-677 | http://purl.obolibrary.org/obo/GO_0051092 | denotes | activation of NF-κB |
T5512 | 130-149 | http://purl.obolibrary.org/obo/GO_0007165 | denotes | signalling pathways |
T5509 | 728-738 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signalling |
T5508 | 130-140 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signalling |
T5502 | 111-140 | http://purl.obolibrary.org/obo/GO_0038061 | denotes | noncanonical NF-κB signalling |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5681 | 613-617 | http://purl.obolibrary.org/obo/GO_0005138 | denotes | IL-6 |
T5680 | 594-597 | http://purl.obolibrary.org/obo/GO_0004705 | denotes | JNK |
T5611 | 173-179 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | ligand |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5694 | 552-557 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4265 | 534-747 | Sentence | denotes | For example, in B cells TRAF6 is required for CD40-mediated JNK activation and IL-6 production, while TRAF2 is required for activation of NF-κB, and TRAF3 serves as a negative regulator of CD40 signalling [30,31]. |
T4264 | 440-533 | Sentence | denotes | Specific TRAF molecules are associated with overlapping and distinct CD40-mediated functions. |
T4263 | 151-439 | Sentence | denotes | Upon binding of their ligand, CD40 and RANK interact with several TRAF members, including TRAF1, TRAF2, TRAF3, TRAF5, and TRAF6, and this leads to the proteolysis of both TRAF2 and TRAF3, which represents an important step in the activation of the noncanonical pathway as described above. |
T4262 | 0-150 | Sentence | denotes | It should be mentioned that CD40, lymphotoxin β receptor and RANK mediate the activation of both canonical and noncanonical NF-κB signalling pathways. |
T83 | 0-150 | Sentence | denotes | It should be mentioned that CD40, lymphotoxin β receptor and RANK mediate the activation of both canonical and noncanonical NF-κB signalling pathways. |
T84 | 151-439 | Sentence | denotes | Upon binding of their ligand, CD40 and RANK interact with several TRAF members, including TRAF1, TRAF2, TRAF3, TRAF5, and TRAF6, and this leads to the proteolysis of both TRAF2 and TRAF3, which represents an important step in the activation of the noncanonical pathway as described above. |
T85 | 440-533 | Sentence | denotes | Specific TRAF molecules are associated with overlapping and distinct CD40-mediated functions. |
T86 | 534-747 | Sentence | denotes | For example, in B cells TRAF6 is required for CD40-mediated JNK activation and IL-6 production, while TRAF2 is required for activation of NF-κB, and TRAF3 serves as a negative regulator of CD40 signalling [30,31]. |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5900 | 723-727 | Protein | denotes | CD40 |
T5899 | 683-688 | Protein | denotes | TRAF3 |
T5898 | 636-641 | Protein | denotes | TRAF2 |
T5897 | 613-617 | Protein | denotes | IL-6 |
T5896 | 580-584 | Protein | denotes | CD40 |
T5895 | 558-563 | Protein | denotes | TRAF6 |
T5894 | 509-513 | Protein | denotes | CD40 |
T5893 | 332-337 | Protein | denotes | TRAF3 |
T5892 | 322-327 | Protein | denotes | TRAF2 |
T5891 | 273-278 | Protein | denotes | TRAF6 |
T5890 | 262-267 | Protein | denotes | TRAF5 |
T5889 | 255-260 | Protein | denotes | TRAF3 |
T5888 | 248-253 | Protein | denotes | TRAF2 |
T5887 | 241-246 | Protein | denotes | TRAF1 |
T5886 | 190-194 | Protein | denotes | RANK |
T5885 | 181-185 | Protein | denotes | CD40 |
T5884 | 61-65 | Protein | denotes | RANK |
T5883 | 34-56 | Protein | denotes | lymphotoxin β receptor |
T5882 | 28-32 | Protein | denotes | CD40 |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7967 | 618-628 | Gene_expression | denotes | production |
T7966 | 567-575 | Positive_regulation | denotes | required |
T7965 | 645-653 | Positive_regulation | denotes | required |
T7964 | 195-203 | Binding | denotes | interact |
T7963 | 302-313 | Protein_catabolism | denotes | proteolysis |
T7929 | 723-727 | Protein | denotes | CD40 |
T7928 | 683-688 | Protein | denotes | TRAF3 |
T7927 | 636-641 | Protein | denotes | TRAF2 |
T7926 | 613-617 | Protein | denotes | IL-6 |
T7925 | 580-584 | Protein | denotes | CD40 |
T7924 | 558-563 | Protein | denotes | TRAF6 |
T7923 | 509-513 | Protein | denotes | CD40 |
T7922 | 332-337 | Protein | denotes | TRAF3 |
T7921 | 322-327 | Protein | denotes | TRAF2 |
T7920 | 273-278 | Protein | denotes | TRAF6 |
T7919 | 262-267 | Protein | denotes | TRAF5 |
T7918 | 255-260 | Protein | denotes | TRAF3 |
T7917 | 248-253 | Protein | denotes | TRAF2 |
T7916 | 241-246 | Protein | denotes | TRAF1 |
T7915 | 190-194 | Protein | denotes | RANK |
T7914 | 181-185 | Protein | denotes | CD40 |
T7913 | 61-65 | Protein | denotes | RANK |
T7912 | 34-56 | Protein | denotes | lymphotoxin β receptor |
T7911 | 28-32 | Protein | denotes | CD40 |
R5535 | T7924 | T7966 | causeOf | TRAF6,required |
R5536 | T7926 | T7967 | themeOf | IL-6,production |
R5537 | T7927 | T7965 | themeOf | TRAF2,required |
R5458 | T7967 | T7966 | themeOf | production,required |
R5504 | T7914 | T7964 | themeOf | CD40,interact |
R5507 | T7914 | T7964 | themeOf | CD40,interact |
R5509 | T7914 | T7964 | themeOf | CD40,interact |
R5510 | T7914 | T7964 | themeOf | CD40,interact |
R5512 | T7914 | T7964 | themeOf | CD40,interact |
R5513 | T7915 | T7964 | themeOf | RANK,interact |
R5515 | T7915 | T7964 | themeOf | RANK,interact |
R5516 | T7915 | T7964 | themeOf | RANK,interact |
R5517 | T7915 | T7964 | themeOf | RANK,interact |
R5518 | T7915 | T7964 | themeOf | RANK,interact |
R5519 | T7916 | T7964 | themeOf | TRAF1,interact |
R5520 | T7916 | T7964 | themeOf | TRAF1,interact |
R5521 | T7917 | T7964 | themeOf | TRAF2,interact |
R5523 | T7917 | T7964 | themeOf | TRAF2,interact |
R5524 | T7918 | T7964 | themeOf | TRAF3,interact |
R5525 | T7918 | T7964 | themeOf | TRAF3,interact |
R5526 | T7919 | T7964 | themeOf | TRAF5,interact |
R5528 | T7919 | T7964 | themeOf | TRAF5,interact |
R5529 | T7920 | T7964 | themeOf | TRAF6,interact |
R5531 | T7920 | T7964 | themeOf | TRAF6,interact |
R5533 | T7921 | T7963 | themeOf | TRAF2,proteolysis |
R5534 | T7922 | T7963 | themeOf | TRAF3,proteolysis |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7083 | 645-653 | Positive_regulation | denotes | required |
T7082 | 618-628 | Gene_expression | denotes | production |
T7081 | 567-575 | Positive_regulation | denotes | required |
T7080 | 195-203 | Binding | denotes | interact |
T7052 | 723-727 | Protein | denotes | CD40 |
T7051 | 683-688 | Protein | denotes | TRAF3 |
T7050 | 636-641 | Protein | denotes | TRAF2 |
T7049 | 613-617 | Protein | denotes | IL-6 |
T7048 | 580-584 | Protein | denotes | CD40 |
T7047 | 558-563 | Protein | denotes | TRAF6 |
T7046 | 509-513 | Protein | denotes | CD40 |
T7045 | 332-337 | Protein | denotes | TRAF3 |
T7044 | 322-327 | Protein | denotes | TRAF2 |
T7043 | 273-278 | Protein | denotes | TRAF6 |
T7042 | 262-267 | Protein | denotes | TRAF5 |
T7041 | 255-260 | Protein | denotes | TRAF3 |
T7040 | 248-253 | Protein | denotes | TRAF2 |
T7039 | 241-246 | Protein | denotes | TRAF1 |
T7038 | 190-194 | Protein | denotes | RANK |
T7037 | 181-185 | Protein | denotes | CD40 |
T7036 | 61-65 | Protein | denotes | RANK |
T7035 | 34-56 | Protein | denotes | lymphotoxin β receptor |
T7034 | 28-32 | Protein | denotes | CD40 |
R4970 | T7037 | T7080 | themeOf | CD40,interact |
R4971 | T7038 | T7080 | themeOf | RANK,interact |
R4972 | T7047 | T7081 | causeOf | TRAF6,required |
R4977 | T7049 | T7082 | themeOf | IL-6,production |
R4986 | T7050 | T7083 | themeOf | TRAF2,required |
R5076 | T7082 | T7081 | themeOf | production,required |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8205 | 156-179 | Binding | denotes | binding of their ligand |
T8201 | 34-149 | Regulation | denotes | lymphotoxin β receptor and RANK mediate the activation of both canonical and noncanonical NF-κB signalling pathways |
T8200 | 34-149 | Regulation | denotes | lymphotoxin β receptor and RANK mediate the activation of both canonical and noncanonical NF-κB signalling pathways |
T8198 | 580-608 | Regulation | denotes | CD40-mediated JNK activation |
T8197 | 658-678 | Positive_regulation | denotes | activation of NF-κB, |
T8196 | 468-522 | Binding | denotes | associated with overlapping and distinct CD40-mediated |
T8185 | 550-564 | Localization | denotes | B cells TRAF6 |
T8181 | 613-629 | Gene_expression | denotes | IL-6 production, |
T8177 | 580-608 | Positive_regulation | denotes | CD40-mediated JNK activation |
T8152 | 23-32 | Protein | denotes | that CD40 |
T8144 | 217-221 | Protein | denotes | TRAF |
T8138 | 273-278 | Protein | denotes | TRAF6 |
T8136 | 440-463 | Entity | denotes | Specific TRAF molecules |
T8111 | 636-641 | Protein | denotes | TRAF2 |
T8106 | 61-65 | Protein | denotes | RANK |
T8104 | 322-327 | Protein | denotes | TRAF2 |
T8100 | 255-260 | Protein | denotes | TRAF3 |
T8086 | 164-179 | Entity | denotes | of their ligand |
T8077 | 181-185 | Protein | denotes | CD40 |
T8070 | 723-746 | Protein | denotes | CD40 signalling [30,31] |
T8067 | 550-557 | Entity | denotes | B cells |
T8057 | 468-522 | Protein | denotes | associated with overlapping and distinct CD40-mediated |
T8054 | 190-194 | Protein | denotes | RANK |
T8049 | 449-453 | Protein | denotes | TRAF |
T8048 | 248-253 | Protein | denotes | TRAF2 |
T8039 | 34-56 | Protein | denotes | lymphotoxin β receptor |
T8037 | 550-563 | Protein | denotes | B cells TRAF6 |
T8032 | 34-47 | Protein | denotes | lymphotoxin β |
T8021 | 332-337 | Protein | denotes | TRAF3 |
T8018 | 669-677 | Protein | denotes | of NF-κB |
T8011 | 613-617 | Protein | denotes | IL-6 |
T7995 | 262-267 | Protein | denotes | TRAF5 |
T7987 | 594-597 | Protein | denotes | JNK |
T7981 | 683-688 | Protein | denotes | TRAF3 |
T7979 | 580-593 | Protein | denotes | CD40-mediated |
T7977 | 89-149 | Protein | denotes | of both canonical and noncanonical NF-κB signalling pathways |
T7975 | 241-246 | Protein | denotes | TRAF1 |
R5468 | T7979 | T8198 | causeOf | CD40-mediated,CD40-mediated JNK activation |
R5473 | T7987 | T8177 | themeOf | JNK,CD40-mediated JNK activation |
R5487 | T8011 | T8181 | themeOf | IL-6,"IL-6 production," |
R5493 | T8018 | T8197 | themeOf | of NF-κB,"activation of NF-κB," |
R5505 | T8037 | T8185 | themeOf | B cells TRAF6,B cells TRAF6 |
R5508 | T8039 | T8201 | causeOf | lymphotoxin β receptor,lymphotoxin β receptor and RANK mediate the activation of both canonical and noncanonical NF-κB signalling pathways |
R5522 | T8057 | T8196 | themeOf | associated with overlapping and distinct CD40-mediated,associated with overlapping and distinct CD40-mediated |
R5530 | T8067 | T8185 | locationOf | B cells,B cells TRAF6 |
R5549 | T8106 | T8200 | causeOf | RANK,lymphotoxin β receptor and RANK mediate the activation of both canonical and noncanonical NF-κB signalling pathways |
R5564 | T8177 | T8198 | themeOf | CD40-mediated JNK activation,CD40-mediated JNK activation |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7585 | 645-653 | Positive_regulation | denotes | required |
T7584 | 598-608 | Positive_regulation | denotes | activation |
T7583 | 585-593 | Positive_regulation | denotes | mediated |
T7582 | 567-575 | Positive_regulation | denotes | required |
T7581 | 567-575 | Positive_regulation | denotes | required |
T7580 | 658-668 | Positive_regulation | denotes | activation |
T7579 | 618-628 | Gene_expression | denotes | production |
T7578 | 598-608 | Positive_regulation | denotes | activation |
T7577 | 723-727 | Protein | denotes | CD40 |
T7576 | 683-688 | Protein | denotes | TRAF3 |
T7575 | 672-677 | Protein | denotes | NF-κB |
T7574 | 636-641 | Protein | denotes | TRAF2 |
T7573 | 613-617 | Protein | denotes | IL-6 |
T7572 | 594-597 | Protein | denotes | JNK |
T7571 | 580-584 | Protein | denotes | CD40 |
T7570 | 468-478 | Binding | denotes | associated |
T7569 | 509-513 | Protein | denotes | CD40 |
T7568 | 449-463 | Protein | denotes | TRAF molecules |
T7567 | 289-294 | Positive_regulation | denotes | leads |
T7566 | 289-294 | Positive_regulation | denotes | leads |
T7565 | 302-313 | Protein_catabolism | denotes | proteolysis |
T7564 | 302-313 | Protein_catabolism | denotes | proteolysis |
T7563 | 195-203 | Binding | denotes | interact |
T7562 | 195-203 | Binding | denotes | interact |
T7561 | 156-163 | Binding | denotes | binding |
T7560 | 156-163 | Binding | denotes | binding |
T7559 | 156-163 | Binding | denotes | binding |
T7558 | 156-163 | Binding | denotes | binding |
T7557 | 156-163 | Binding | denotes | binding |
T7556 | 156-163 | Binding | denotes | binding |
T7555 | 156-163 | Binding | denotes | binding |
T7554 | 156-163 | Binding | denotes | binding |
T7553 | 156-163 | Binding | denotes | binding |
T7552 | 156-163 | Binding | denotes | binding |
T7551 | 156-163 | Binding | denotes | binding |
T7550 | 332-337 | Protein | denotes | TRAF3 |
T7549 | 322-327 | Protein | denotes | TRAF2 |
T7548 | 273-278 | Protein | denotes | TRAF6 |
T7547 | 262-267 | Protein | denotes | TRAF5 |
T7546 | 255-260 | Protein | denotes | TRAF3 |
T7545 | 248-253 | Protein | denotes | TRAF2 |
T7544 | 241-246 | Protein | denotes | TRAF1 |
T7543 | 190-194 | Protein | denotes | RANK |
T7542 | 181-185 | Protein | denotes | CD40 |
T7541 | 124-129 | Protein | denotes | NF-κB |
T7540 | 61-65 | Protein | denotes | RANK |
T7539 | 34-56 | Protein | denotes | lymphotoxin β receptor |
T7538 | 28-32 | Protein | denotes | CD40 |
R5231 | T7542 | T7554 | themeOf | CD40,binding |
R5232 | T7542 | T7555 | themeOf | CD40,binding |
R5233 | T7542 | T7556 | themeOf | CD40,binding |
R5234 | T7542 | T7562 | themeOf | CD40,interact |
R5235 | T7542 | T7563 | themeOf | CD40,interact |
R5236 | T7543 | T7557 | themeOf | RANK,binding |
R5237 | T7543 | T7558 | themeOf | RANK,binding |
R5238 | T7543 | T7559 | themeOf | RANK,binding |
R5240 | T7546 | T7551 | themeOf | TRAF3,binding |
R5241 | T7546 | T7554 | themeOf | TRAF3,binding |
R5242 | T7546 | T7557 | themeOf | TRAF3,binding |
R5243 | T7546 | T7560 | themeOf | TRAF3,binding |
R5244 | T7547 | T7552 | themeOf | TRAF5,binding |
R5245 | T7547 | T7555 | themeOf | TRAF5,binding |
R5246 | T7547 | T7558 | themeOf | TRAF5,binding |
R5247 | T7547 | T7561 | themeOf | TRAF5,binding |
R5248 | T7547 | T7562 | themeOf | TRAF5,interact |
R5249 | T7548 | T7553 | themeOf | TRAF6,binding |
R5250 | T7548 | T7556 | themeOf | TRAF6,binding |
R5251 | T7548 | T7559 | themeOf | TRAF6,binding |
R5252 | T7548 | T7560 | themeOf | TRAF6,binding |
R5253 | T7548 | T7561 | themeOf | TRAF6,binding |
R5254 | T7548 | T7563 | themeOf | TRAF6,interact |
R5255 | T7549 | T7564 | themeOf | TRAF2,proteolysis |
R5256 | T7550 | T7565 | themeOf | TRAF3,proteolysis |
R5257 | T7564 | T7566 | themeOf | proteolysis,leads |
R5258 | T7565 | T7567 | themeOf | proteolysis,leads |
R5259 | T7568 | T7570 | themeOf | TRAF molecules,associated |
R5262 | T7572 | T7578 | themeOf | JNK,activation |
R5263 | T7573 | T7579 | themeOf | IL-6,production |
R5265 | T7575 | T7580 | themeOf | NF-κB,activation |
R5267 | T7578 | T7581 | themeOf | activation,required |
R5268 | T7578 | T7583 | themeOf | activation,mediated |
R5269 | T7579 | T7582 | themeOf | production,required |
R5270 | T7579 | T7584 | themeOf | production,activation |
R5272 | T7580 | T7585 | themeOf | activation,required |
R5274 | T7583 | T7571 | Cause | mediated,CD40 |
R5276 | T7585 | T7574 | Cause | required,TRAF2 |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4235 | 723-727 | Protein | denotes | CD40 |
T4234 | 710-719 | Negative_regulation | denotes | regulator |
T4233 | 683-688 | Protein | denotes | TRAF3 |
T4232 | 645-653 | Positive_regulation | denotes | required |
T4231 | 636-641 | Protein | denotes | TRAF2 |
T4230 | 618-628 | Gene_expression | denotes | production |
T4229 | 613-617 | Protein | denotes | IL-6 |
T4228 | 580-584 | Protein | denotes | CD40 |
T4227 | 567-575 | Positive_regulation | denotes | required |
T4226 | 558-563 | Protein | denotes | TRAF6 |
T4225 | 509-513 | Protein | denotes | CD40 |
T4224 | 332-337 | Protein | denotes | TRAF3 |
T4223 | 322-327 | Protein | denotes | TRAF2 |
T4222 | 273-278 | Protein | denotes | TRAF6 |
T4221 | 262-267 | Protein | denotes | TRAF5 |
T4220 | 255-260 | Protein | denotes | TRAF3 |
T4219 | 248-253 | Protein | denotes | TRAF2 |
T4218 | 241-246 | Protein | denotes | TRAF1 |
T4217 | 195-203 | Binding | denotes | interact |
T4216 | 190-194 | Protein | denotes | RANK |
T4215 | 181-185 | Protein | denotes | CD40 |
T4214 | 156-163 | Binding | denotes | binding |
T4213 | 61-65 | Protein | denotes | RANK |
T4212 | 34-56 | Protein | denotes | lymphotoxin β receptor |
T4211 | 28-32 | Protein | denotes | CD40 |
T4094 | 723-727 | Protein | denotes | CD40 |
T4093 | 683-688 | Protein | denotes | TRAF3 |
T4092 | 636-641 | Protein | denotes | TRAF2 |
T4091 | 613-617 | Protein | denotes | IL-6 |
T4090 | 580-584 | Protein | denotes | CD40 |
T4089 | 558-563 | Protein | denotes | TRAF6 |
T4088 | 509-513 | Protein | denotes | CD40 |
T4087 | 332-337 | Protein | denotes | TRAF3 |
T4086 | 322-327 | Protein | denotes | TRAF2 |
T4085 | 273-278 | Protein | denotes | TRAF6 |
T4084 | 262-267 | Protein | denotes | TRAF5 |
T4083 | 255-260 | Protein | denotes | TRAF3 |
T4082 | 248-253 | Protein | denotes | TRAF2 |
T4081 | 241-246 | Protein | denotes | TRAF1 |
T4080 | 190-194 | Protein | denotes | RANK |
T4079 | 181-185 | Protein | denotes | CD40 |
T4078 | 61-65 | Protein | denotes | RANK |
T4077 | 34-56 | Protein | denotes | lymphotoxin β receptor |
T4076 | 28-32 | Protein | denotes | CD40 |
R2899 | T4215 | T4214 | themeOf | CD40,binding |
R2900 | T4215 | T4217 | themeOf | CD40,interact |
R2901 | T4218 | T4214 | themeOf | TRAF1,binding |
R2902 | T4218 | T4217 | themeOf | TRAF1,interact |
R2903 | T4219 | T4217 | themeOf | TRAF2,interact |
R2904 | T4219 | T4214 | themeOf | TRAF2,binding |
R2905 | T4220 | T4217 | themeOf | TRAF3,interact |
R2906 | T4220 | T4214 | themeOf | TRAF3,binding |
R2907 | T4221 | T4214 | themeOf | TRAF5,binding |
R2908 | T4221 | T4217 | themeOf | TRAF5,interact |
R2909 | T4222 | T4214 | themeOf | TRAF6,binding |
R2910 | T4222 | T4217 | themeOf | TRAF6,interact |
R2911 | T4226 | T4227 | causeOf | TRAF6,required |
R2912 | T4229 | T4230 | themeOf | IL-6,production |
R2913 | T4231 | T4232 | causeOf | TRAF2,required |