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PMC:3218875 / 14666-14830 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T21324 74-85 Protein_catabolism denotes degradation
T21310 133-137 Protein denotes RelB
T21309 97-100 Protein denotes p52
T21308 89-93 Protein denotes p100
R13915 T21308 T21324 themeOf p100,degradation
R13916 T21309 T21324 themeOf p52,degradation

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T22010 163-164 . denotes .
T22009 150-163 NN denotes transcription
T22008 141-149 VB denotes activate
T22007 138-140 TO denotes to
T22006 133-137 NNP denotes RelB
T22005 128-132 IN denotes with
T22004 116-127 NN denotes heterodimer
T22003 114-115 DT denotes a
T22002 108-113 VBZ denotes forms
T22001 102-107 WDT denotes which
T22000 100-101 , denotes ,
T21999 97-100 CD denotes p52
T21998 94-96 TO denotes to
T21997 89-93 CD denotes p100
T21996 86-88 IN denotes of
T21995 74-85 NN denotes degradation
T21994 62-73 JJ denotes proteasomal
T21993 54-61 JJ denotes partial
T21992 50-53 CC denotes and
T21991 31-49 NN denotes polyubiquitination
T21990 20-30 JJ denotes K48-linked
T21989 17-19 IN denotes by
T21988 8-16 VBN denotes followed
T21987 5-7 VBZ denotes is
T21986 0-4 DT denotes This
R14358 T21986 T21988 nsubjpass This,followed
R14359 T21987 T21988 auxpass is,followed
R14360 T21988 T21988 ROOT followed,followed
R14361 T21989 T21988 agent by,followed
R14362 T21990 T21991 amod K48-linked,polyubiquitination
R14363 T21991 T21989 pobj polyubiquitination,by
R14364 T21992 T21991 cc and,polyubiquitination
R14365 T21993 T21995 amod partial,degradation
R14366 T21994 T21995 amod proteasomal,degradation
R14367 T21995 T21991 conj degradation,polyubiquitination
R14368 T21996 T21995 prep of,degradation
R14369 T21997 T21996 pobj p100,of
R14370 T21998 T21995 prep to,degradation
R14371 T21999 T21998 pobj p52,to
R14372 T22000 T21999 punct ",",p52
R14373 T22001 T22002 nsubj which,forms
R14374 T22002 T21999 relcl forms,p52
R14375 T22003 T22004 det a,heterodimer
R14376 T22004 T22002 dobj heterodimer,forms
R14377 T22005 T22004 prep with,heterodimer
R14378 T22006 T22005 pobj RelB,with
R14379 T22007 T22008 aux to,activate
R14380 T22008 T22002 advcl activate,forms
R14381 T22009 T22008 dobj transcription,activate
R14382 T22010 T21988 punct .,followed

DLUT931

Id Subject Object Predicate Lexical cue
T22209 116-127 Binding denotes heterodimer
T22208 74-85 Protein_catabolism denotes degradation
T22183 133-137 Protein denotes RelB
T22182 97-100 Protein denotes p52
T22181 89-93 Protein denotes p100
R14494 T22181 T22208 themeOf p100,degradation
R14495 T22182 T22208 themeOf p52,degradation
R14496 T22183 T22209 themeOf RelB,heterodimer

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T22102 133-137 http://www.uniprot.org/uniprot/Q01201 denotes RelB
T22101 97-100 http://www.uniprot.org/uniprot/Q00653 denotes p52
T22100 89-93 http://www.uniprot.org/uniprot/Q00653 denotes p100

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T21525 133-137 Protein denotes RelB
T21524 97-100 Protein denotes p52
T21523 89-93 Protein denotes p100

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T21496 0-4 Anaphor denotes This

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T21680 150-163 NN denotes transcription
T21679 141-149 VB denotes activate
T21678 138-140 TO denotes to
T21677 133-137 NN denotes RelB
T21676 128-132 IN denotes with
T21675 116-127 NN denotes heterodimer
T21674 114-115 DT denotes a
T21673 108-113 VB denotes forms
T21672 102-107 WDT denotes which
T21671 100-101 -COMMA- denotes ,
T21670 97-100 NN denotes p52
T21669 94-96 TO denotes to
T21668 89-93 NN denotes p100
T21667 86-88 IN denotes of
T21666 74-85 NN denotes degradation
T21665 62-73 JJ denotes proteasomal
T21664 54-61 JJ denotes partial
T21663 50-53 CC denotes and
T21662 31-49 NN denotes polyubiquitination
T21661 20-30 JJ denotes K48-linked
T21660 17-19 IN denotes by
T21659 8-16 VB denotes followed
T21658 5-7 VB denotes is
T21657 0-4 DT denotes This
R14136 T21657 T21658 arg1Of This,is
R14137 T21657 T21659 arg2Of This,followed
R14138 T21659 T21658 arg2Of followed,is
R14139 T21661 T21662 arg1Of K48-linked,polyubiquitination
R14140 T21661 T21663 arg1Of K48-linked,and
R14141 T21665 T21663 arg2Of proteasomal,and
R14142 T21665 T21664 arg1Of proteasomal,partial
R14143 T21666 T21659 arg1Of degradation,followed
R14144 T21666 T21660 arg2Of degradation,by
R14145 T21666 T21661 arg1Of degradation,K48-linked
R14146 T21666 T21665 arg1Of degradation,proteasomal
R14147 T21666 T21667 arg1Of degradation,of
R14148 T21666 T21671 arg1Of degradation,","
R14149 T21666 T21672 arg1Of degradation,which
R14150 T21666 T21673 arg1Of degradation,forms
R14151 T21668 T21667 arg2Of p100,of
R14152 T21668 T21669 arg1Of p100,to
R14153 T21670 T21669 arg2Of p52,to
R14154 T21675 T21673 arg2Of heterodimer,forms
R14155 T21675 T21674 arg1Of heterodimer,a
R14156 T21675 T21676 arg1Of heterodimer,with
R14157 T21675 T21678 modOf heterodimer,to
R14158 T21677 T21676 arg2Of RelB,with
R14159 T21679 T21678 arg1Of activate,to
R14160 T21680 T21679 arg2Of transcription,activate

GO-BP

Id Subject Object Predicate Lexical cue
T21754 150-163 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T21752 74-85 http://purl.obolibrary.org/obo/GO_0009056 denotes degradation

sentences

Id Subject Object Predicate Lexical cue
T21408 0-164 Sentence denotes This is followed by K48-linked polyubiquitination and partial proteasomal degradation of p100 to p52, which forms a heterodimer with RelB to activate transcription.
T81 0-164 Sentence denotes This is followed by K48-linked polyubiquitination and partial proteasomal degradation of p100 to p52, which forms a heterodimer with RelB to activate transcription.

simple1

Id Subject Object Predicate Lexical cue
T21847 133-137 Protein denotes RelB
T21846 97-100 Protein denotes p52
T21845 89-93 Protein denotes p100

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T22418 74-85 Protein_catabolism denotes degradation
T22394 133-137 Protein denotes RelB
T22393 97-100 Protein denotes p52
T22392 89-93 Protein denotes p100
R14589 T22392 T22418 themeOf p100,degradation
R14590 T22393 T22418 themeOf p52,degradation

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T22155 74-85 Protein_catabolism denotes degradation
T22134 133-137 Protein denotes RelB
T22133 97-100 Protein denotes p52
T22132 89-93 Protein denotes p100
R14465 T22132 T22155 themeOf p100,degradation
R14466 T22133 T22155 themeOf p52,degradation

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T22480 54-101 Protein_catabolism denotes partial proteasomal degradation of p100 to p52,
T22469 94-101 Protein denotes to p52,
T22468 128-137 Protein denotes with RelB
T22445 86-93 Protein denotes of p100
T22428 114-163 Entity denotes a heterodimer with RelB to activate transcription
T22420 20-30 Entity denotes K48-linked
R14600 T22445 T22480 themeOf of p100,"partial proteasomal degradation of p100 to p52,"

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T22295 116-127 Binding denotes heterodimer
T22294 74-85 Protein_catabolism denotes degradation
T22293 74-85 Protein_catabolism denotes degradation
T22292 133-137 Protein denotes RelB
T22291 97-100 Protein denotes p52
T22290 89-93 Protein denotes p100
R14541 T22290 T22293 themeOf p100,degradation
R14542 T22291 T22294 themeOf p52,degradation
R14543 T22292 T22295 themeOf RelB,heterodimer

test3

Id Subject Object Predicate Lexical cue
T21394 133-137 Protein denotes RelB
T21393 97-100 Protein denotes p52
T21392 89-93 Protein denotes p100
T21391 74-85 Protein_catabolism denotes degradation
T21352 133-137 Protein denotes RelB
T21351 97-100 Protein denotes p52
T21350 89-93 Protein denotes p100
R13929 T21392 T21391 themeOf p100,degradation
R13930 T21393 T21391 themeOf p52,degradation
R13931 T21394 T21391 themeOf RelB,degradation