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PMC:3218875 / 14388-14477 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T21301 85-88 Protein denotes NIK
T21300 66-71 Protein denotes TRAF3
T21299 19-20 Protein denotes 2
T21298 13-18 Protein denotes cIAP1

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T21951 88-89 . denotes .
T21950 85-88 NNP denotes NIK
T21949 80-84 IN denotes than
T21948 73-79 RB denotes rather
T21947 71-72 , denotes ,
T21946 66-71 CD denotes TRAF3
T21945 63-65 TO denotes to
T21944 44-62 NN denotes polyubiquitination
T21943 33-43 JJ denotes K48-linked
T21942 29-32 PRP$ denotes its
T21941 21-28 VBZ denotes directs
T21940 13-20 JJ denotes cIAP1/2
T21939 0-12 RB denotes Subsequently
R14311 T21939 T21941 advmod Subsequently,directs
R14312 T21940 T21941 nsubj cIAP1/2,directs
R14313 T21941 T21941 ROOT directs,directs
R14314 T21942 T21944 poss its,polyubiquitination
R14315 T21943 T21944 amod K48-linked,polyubiquitination
R14316 T21944 T21941 dobj polyubiquitination,directs
R14317 T21945 T21944 prep to,polyubiquitination
R14318 T21946 T21945 pobj TRAF3,to
R14319 T21947 T21944 punct ",",polyubiquitination
R14320 T21948 T21949 advmod rather,than
R14321 T21949 T21944 cc than,polyubiquitination
R14322 T21950 T21949 pobj NIK,than
R14323 T21951 T21941 punct .,directs

DLUT931

Id Subject Object Predicate Lexical cue
T22200 44-62 Binding denotes polyubiquitination
T22174 85-88 Protein denotes NIK
T22173 66-71 Protein denotes TRAF3
T22172 19-20 Protein denotes 2
T22171 13-18 Protein denotes cIAP1
R14484 T22171 T22200 themeOf cIAP1,polyubiquitination
R14485 T22173 T22200 themeOf TRAF3,polyubiquitination

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T22094 13-18 http://www.uniprot.org/uniprot/Q13490 denotes cIAP1
T22088 66-71 http://www.uniprot.org/uniprot/Q13114 denotes TRAF3
T22079 85-88 http://www.uniprot.org/uniprot/Q99558 denotes NIK

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T21516 85-88 Protein denotes NIK
T21515 66-71 Protein denotes TRAF3
T21514 19-20 Protein denotes 2
T21513 13-18 Protein denotes cIAP1

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T21624 85-88 NN denotes NIK
T21623 80-84 IN denotes than
T21622 73-79 RB denotes rather
T21621 71-72 -COMMA- denotes ,
T21620 66-71 NN denotes TRAF3
T21619 63-65 TO denotes to
T21618 44-62 NN denotes polyubiquitination
T21617 33-43 JJ denotes K48-linked
T21616 29-32 PRP-DOLLAR- denotes its
T21615 21-28 VB denotes directs
T21614 13-20 NN denotes cIAP1/2
T21613 0-12 RB denotes Subsequently
R14091 T21614 T21613 arg1Of cIAP1/2,Subsequently
R14092 T21614 T21615 arg1Of cIAP1/2,directs
R14093 T21618 T21617 arg1Of polyubiquitination,K48-linked
R14094 T21618 T21619 arg1Of polyubiquitination,to
R14095 T21618 T21623 arg1Of polyubiquitination,than
R14096 T21620 T21619 arg2Of TRAF3,to
R14097 T21623 T21615 arg2Of than,directs
R14098 T21623 T21616 arg1Of than,its
R14099 T21623 T21621 arg1Of than,","
R14100 T21623 T21622 arg1Of than,rather
R14101 T21624 T21623 arg2Of NIK,than

GO-BP

Id Subject Object Predicate Lexical cue
T21747 85-88 http://purl.obolibrary.org/obo/GO_0004704 denotes NIK

GO-MF

Id Subject Object Predicate Lexical cue
T21768 85-88 http://purl.obolibrary.org/obo/GO_0004704 denotes NIK

sentences

Id Subject Object Predicate Lexical cue
T21405 0-89 Sentence denotes Subsequently cIAP1/2 directs its K48-linked polyubiquitination to TRAF3, rather than NIK.
T78 0-89 Sentence denotes Subsequently cIAP1/2 directs its K48-linked polyubiquitination to TRAF3, rather than NIK.

simple1

Id Subject Object Predicate Lexical cue
T21838 85-88 Protein denotes NIK
T21837 66-71 Protein denotes TRAF3
T21836 19-20 Protein denotes 2
T21835 13-18 Protein denotes cIAP1

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T22408 44-62 Binding denotes polyubiquitination
T22385 85-88 Protein denotes NIK
T22384 66-71 Protein denotes TRAF3
T22383 19-20 Protein denotes 2
T22382 13-18 Protein denotes cIAP1
R14577 T22382 T22408 themeOf cIAP1,polyubiquitination
R14578 T22384 T22408 themeOf TRAF3,polyubiquitination
R14579 T22385 T22408 themeOf NIK,polyubiquitination

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T22125 85-88 Protein denotes NIK
T22124 66-71 Protein denotes TRAF3
T22123 19-20 Protein denotes 2
T22122 13-18 Protein denotes cIAP1
T22148 44-62 Binding denotes polyubiquitination
R14455 T22124 T22148 themeOf TRAF3,polyubiquitination
R14456 T22125 T22148 themeOf NIK,polyubiquitination

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T22481 29-62 Binding denotes its K48-linked polyubiquitination
T22477 0-88 Regulation denotes Subsequently cIAP1/2 directs its K48-linked polyubiquitination to TRAF3, rather than NIK
T22465 33-43 Entity denotes K48-linked
T22463 13-20 Protein denotes cIAP1/2
T22460 66-71 Protein denotes TRAF3
T22455 19-20 Protein denotes 2
T22451 13-20 Protein denotes cIAP1/2
T22441 85-88 Protein denotes NIK
R14604 T22463 T22477 causeOf cIAP1/2,"Subsequently cIAP1/2 directs its K48-linked polyubiquitination to TRAF3, rather than NIK"
R14605 T22465 T22481 themeOf K48-linked,its K48-linked polyubiquitination

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T22274 85-88 Protein denotes NIK
T22273 66-71 Protein denotes TRAF3

test3

Id Subject Object Predicate Lexical cue
T21380 85-88 Protein denotes NIK
T21379 66-71 Protein denotes TRAF3
T21378 19-20 Protein denotes 2
T21377 13-18 Protein denotes cIAP1
T21343 85-88 Protein denotes NIK
T21342 66-71 Protein denotes TRAF3
T21341 19-20 Protein denotes 2
T21340 13-18 Protein denotes cIAP1