PMC:3218875 / 1420-1617 JSONTXT

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    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T982","span":{"begin":196,"end":197},"obj":"."},{"id":"T981","span":{"begin":188,"end":196},"obj":"NNS"},{"id":"T980","span":{"begin":177,"end":187},"obj":"JJ"},{"id":"T979","span":{"begin":171,"end":176},"obj":"JJ"},{"id":"T978","span":{"begin":166,"end":170},"obj":"JJ"},{"id":"T977","span":{"begin":162,"end":165},"obj":"CC"},{"id":"T976","span":{"begin":159,"end":161},"obj":"NNP"},{"id":"T975","span":{"begin":156,"end":158},"obj":"IN"},{"id":"T974","span":{"begin":144,"end":155},"obj":"NN"},{"id":"T973","span":{"begin":140,"end":143},"obj":"DT"},{"id":"T972","span":{"begin":137,"end":139},"obj":"IN"},{"id":"T971","span":{"begin":132,"end":136},"obj":"NN"},{"id":"T970","span":{"begin":128,"end":131},"obj":"JJ"},{"id":"T969","span":{"begin":126,"end":127},"obj":"DT"},{"id":"T968","span":{"begin":120,"end":125},"obj":"VBZ"},{"id":"T967","span":{"begin":109,"end":119},"obj":"NN"},{"id":"T966","span":{"begin":104,"end":108},"obj":"NN"},{"id":"T965","span":{"begin":88,"end":103},"obj":"JJ"},{"id":"T964","span":{"begin":85,"end":87},"obj":"IN"},{"id":"T963","span":{"begin":74,"end":84},"obj":"NN"},{"id":"T962","span":{"begin":69,"end":73},"obj":"IN"},{"id":"T961","span":{"begin":60,"end":68},"obj":"VBN"},{"id":"T960","span":{"begin":55,"end":59},"obj":"RB"},{"id":"T959","span":{"begin":52,"end":54},"obj":"VBZ"},{"id":"T958","span":{"begin":49,"end":51},"obj":"PRP"},{"id":"T957","span":{"begin":45,"end":48},"obj":"CC"},{"id":"T956","span":{"begin":43,"end":44},"obj":","},{"id":"T955","span":{"begin":33,"end":43},"obj":"VBN"},{"id":"T954","span":{"begin":29,"end":32},"obj":"RB"},{"id":"T953","span":{"begin":23,"end":28},"obj":"RB"},{"id":"T952","span":{"begin":20,"end":22},"obj":"VBZ"},{"id":"T951","span":{"begin":17,"end":19},"obj":"NNP"},{"id":"T950","span":{"begin":14,"end":16},"obj":"IN"},{"id":"T949","span":{"begin":4,"end":13},"obj":"NN"},{"id":"T948","span":{"begin":0,"end":3},"obj":"DT"}],"relations":[{"id":"R758","pred":"det","subj":"T948","obj":"T949"},{"id":"R759","pred":"nsubj","subj":"T949","obj":"T952"},{"id":"R760","pred":"prep","subj":"T950","obj":"T949"},{"id":"R761","pred":"pobj","subj":"T951","obj":"T950"},{"id":"R762","pred":"auxpass","subj":"T952","obj":"T955"},{"id":"R763","pred":"advmod","subj":"T953","obj":"T955"},{"id":"R764","pred":"neg","subj":"T954","obj":"T955"},{"id":"R765","pred":"ROOT","subj":"T955","obj":"T955"},{"id":"R766","pred":"punct","subj":"T956","obj":"T955"},{"id":"R767","pred":"cc","subj":"T957","obj":"T955"},{"id":"R768","pred":"nsubjpass","subj":"T958","obj":"T961"},{"id":"R769","pred":"auxpass","subj":"T959","obj":"T961"},{"id":"R770","pred":"advmod","subj":"T960","obj":"T961"},{"id":"R771","pred":"conj","subj":"T961","obj":"T955"},{"id":"R772","pred":"mark","subj":"T962","obj":"T968"},{"id":"R773","pred":"nsubj","subj":"T963","obj":"T968"},{"id":"R774","pred":"prep","subj":"T964","obj":"T963"},{"id":"R775","pred":"amod","subj":"T965","obj":"T967"},{"id":"R776","pred":"compound","subj":"T966","obj":"T967"},{"id":"R777","pred":"pobj","subj":"T967","obj":"T964"},{"id":"R778","pred":"ccomp","subj":"T968","obj":"T961"},{"id":"R779","pred":"det","subj":"T969","obj":"T971"},{"id":"R780","pred":"amod","subj":"T970","obj":"T971"},{"id":"R781","pred":"dobj","subj":"T971","obj":"T968"},{"id":"R782","pred":"prep","subj":"T972","obj":"T971"},{"id":"R783","pred":"det","subj":"T973","obj":"T974"},{"id":"R784","pred":"pobj","subj":"T974","obj":"T972"},{"id":"R785","pred":"prep","subj":"T975","obj":"T974"},{"id":"R786","pred":"pobj","subj":"T976","obj":"T975"},{"id":"R787","pred":"cc","subj":"T977","obj":"T974"},{"id":"R788","pred":"amod","subj":"T978","obj":"T981"},{"id":"R789","pred":"amod","subj":"T979","obj":"T981"},{"id":"R790","pred":"amod","subj":"T980","obj":"T981"},{"id":"R791","pred":"conj","subj":"T981","obj":"T974"},{"id":"R792","pred":"punct","subj":"T982","obj":"T961"}],"text":"The aetiology of RA is still not understood, but it is well accepted that activation of NF-κB-dependent gene expression plays a key role in the development of RA and many other autoimmune diseases."}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T519","span":{"begin":188,"end":196},"obj":"NN"},{"id":"T518","span":{"begin":177,"end":187},"obj":"JJ"},{"id":"T517","span":{"begin":171,"end":176},"obj":"JJ"},{"id":"T516","span":{"begin":166,"end":170},"obj":"JJ"},{"id":"T515","span":{"begin":162,"end":165},"obj":"CC"},{"id":"T514","span":{"begin":159,"end":161},"obj":"NN"},{"id":"T513","span":{"begin":156,"end":158},"obj":"IN"},{"id":"T512","span":{"begin":144,"end":155},"obj":"NN"},{"id":"T511","span":{"begin":140,"end":143},"obj":"DT"},{"id":"T510","span":{"begin":137,"end":139},"obj":"IN"},{"id":"T509","span":{"begin":132,"end":136},"obj":"NN"},{"id":"T508","span":{"begin":128,"end":131},"obj":"JJ"},{"id":"T507","span":{"begin":126,"end":127},"obj":"DT"},{"id":"T506","span":{"begin":120,"end":125},"obj":"VB"},{"id":"T505","span":{"begin":109,"end":119},"obj":"NN"},{"id":"T504","span":{"begin":104,"end":108},"obj":"NN"},{"id":"T503","span":{"begin":88,"end":103},"obj":"JJ"},{"id":"T502","span":{"begin":85,"end":87},"obj":"IN"},{"id":"T501","span":{"begin":74,"end":84},"obj":"NN"},{"id":"T500","span":{"begin":69,"end":73},"obj":"IN"},{"id":"T499","span":{"begin":60,"end":68},"obj":"VB"},{"id":"T498","span":{"begin":55,"end":59},"obj":"RB"},{"id":"T497","span":{"begin":52,"end":54},"obj":"VB"},{"id":"T496","span":{"begin":49,"end":51},"obj":"PRP"},{"id":"T495","span":{"begin":45,"end":48},"obj":"CC"},{"id":"T494","span":{"begin":43,"end":44},"obj":"-COMMA-"},{"id":"T493","span":{"begin":33,"end":43},"obj":"VB"},{"id":"T492","span":{"begin":29,"end":32},"obj":"RB"},{"id":"T491","span":{"begin":23,"end":28},"obj":"RB"},{"id":"T490","span":{"begin":20,"end":22},"obj":"VB"},{"id":"T489","span":{"begin":17,"end":19},"obj":"NN"},{"id":"T488","span":{"begin":14,"end":16},"obj":"IN"},{"id":"T487","span":{"begin":4,"end":13},"obj":"NN"},{"id":"T486","span":{"begin":0,"end":3},"obj":"DT"}],"relations":[{"id":"R349","pred":"arg1Of","subj":"T487","obj":"T486"},{"id":"R350","pred":"arg1Of","subj":"T487","obj":"T488"},{"id":"R351","pred":"arg1Of","subj":"T487","obj":"T490"},{"id":"R352","pred":"arg2Of","subj":"T487","obj":"T493"},{"id":"R353","pred":"arg2Of","subj":"T489","obj":"T488"},{"id":"R354","pred":"arg2Of","subj":"T493","obj":"T490"},{"id":"R355","pred":"arg1Of","subj":"T493","obj":"T491"},{"id":"R356","pred":"arg1Of","subj":"T493","obj":"T492"},{"id":"R357","pred":"arg1Of","subj":"T493","obj":"T495"},{"id":"R358","pred":"arg1Of","subj":"T495","obj":"T494"},{"id":"R359","pred":"arg1Of","subj":"T496","obj":"T497"},{"id":"R360","pred":"arg2Of","subj":"T496","obj":"T499"},{"id":"R361","pred":"arg2Of","subj":"T499","obj":"T495"},{"id":"R362","pred":"arg2Of","subj":"T499","obj":"T497"},{"id":"R363","pred":"arg1Of","subj":"T499","obj":"T498"},{"id":"R364","pred":"arg1Of","subj":"T501","obj":"T502"},{"id":"R365","pred":"arg1Of","subj":"T501","obj":"T506"},{"id":"R366","pred":"arg2Of","subj":"T505","obj":"T502"},{"id":"R367","pred":"arg1Of","subj":"T505","obj":"T503"},{"id":"R368","pred":"arg1Of","subj":"T505","obj":"T504"},{"id":"R369","pred":"arg3Of","subj":"T506","obj":"T499"},{"id":"R370","pred":"arg1Of","subj":"T506","obj":"T500"},{"id":"R371","pred":"arg1Of","subj":"T506","obj":"T510"},{"id":"R372","pred":"arg2Of","subj":"T509","obj":"T506"},{"id":"R373","pred":"arg1Of","subj":"T509","obj":"T507"},{"id":"R374","pred":"arg1Of","subj":"T509","obj":"T508"},{"id":"R375","pred":"arg2Of","subj":"T512","obj":"T510"},{"id":"R376","pred":"arg1Of","subj":"T512","obj":"T511"},{"id":"R377","pred":"arg1Of","subj":"T512","obj":"T513"},{"id":"R378","pred":"arg1Of","subj":"T514","obj":"T515"},{"id":"R379","pred":"arg2Of","subj":"T515","obj":"T513"},{"id":"R380","pred":"arg2Of","subj":"T519","obj":"T515"},{"id":"R381","pred":"arg1Of","subj":"T519","obj":"T516"},{"id":"R382","pred":"arg1Of","subj":"T519","obj":"T517"},{"id":"R383","pred":"arg1Of","subj":"T519","obj":"T518"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"The aetiology of RA is still not understood, but it is well accepted that activation of NF-κB-dependent gene expression plays a key role in the development of RA and many other autoimmune diseases."}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T788","span":{"begin":144,"end":155},"obj":"http://purl.obolibrary.org/obo/GO_0032502"},{"id":"T786","span":{"begin":104,"end":119},"obj":"http://purl.obolibrary.org/obo/GO_0010467"},{"id":"T781","span":{"begin":74,"end":93},"obj":"http://purl.obolibrary.org/obo/GO_0051092"}],"text":"The aetiology of RA is still not understood, but it is well accepted that activation of NF-κB-dependent gene expression plays a key role in the development of RA and many other autoimmune diseases."}

    sentences

    {"project":"sentences","denotations":[{"id":"T328","span":{"begin":0,"end":197},"obj":"Sentence"},{"id":"T11","span":{"begin":0,"end":197},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"The aetiology of RA is still not understood, but it is well accepted that activation of NF-κB-dependent gene expression plays a key role in the development of RA and many other autoimmune diseases."}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T1587","span":{"begin":85,"end":119},"obj":"Regulation"},{"id":"T1579","span":{"begin":88,"end":103},"obj":"Protein"},{"id":"T1546","span":{"begin":159,"end":161},"obj":"Protein"},{"id":"T1532","span":{"begin":14,"end":19},"obj":"Protein"}],"relations":[{"id":"R1265","pred":"causeOf","subj":"T1579","obj":"T1587"}],"text":"The aetiology of RA is still not understood, but it is well accepted that activation of NF-κB-dependent gene expression plays a key role in the development of RA and many other autoimmune diseases."}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T1300","span":{"begin":88,"end":93},"obj":"Protein"}],"text":"The aetiology of RA is still not understood, but it is well accepted that activation of NF-κB-dependent gene expression plays a key role in the development of RA and many other autoimmune diseases."}