PMC:3218875 / 11572-11710 JSONTXT

Annnotations TAB JSON ListView MergeView

    testone

    {"project":"testone","denotations":[{"id":"T3888","span":{"begin":108,"end":111},"obj":"Protein"},{"id":"T3887","span":{"begin":49,"end":53},"obj":"Protein"}],"text":"of a distinct E2/E3 enzyme complex that modifies NEMO with linear polyubiquitin chains and is essential for TNF-activated NF-κB signalling"}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T6361","span":{"begin":128,"end":138},"obj":"NN"},{"id":"T6360","span":{"begin":122,"end":127},"obj":"JJ"},{"id":"T6359","span":{"begin":108,"end":121},"obj":"JJ"},{"id":"T6358","span":{"begin":104,"end":107},"obj":"IN"},{"id":"T6357","span":{"begin":94,"end":103},"obj":"JJ"},{"id":"T6356","span":{"begin":91,"end":93},"obj":"VBZ"},{"id":"T6355","span":{"begin":87,"end":90},"obj":"CC"},{"id":"T6354","span":{"begin":80,"end":86},"obj":"NNS"},{"id":"T6353","span":{"begin":66,"end":79},"obj":"NN"},{"id":"T6352","span":{"begin":59,"end":65},"obj":"JJ"},{"id":"T6351","span":{"begin":54,"end":58},"obj":"IN"},{"id":"T6350","span":{"begin":49,"end":53},"obj":"NNP"},{"id":"T6349","span":{"begin":40,"end":48},"obj":"VBZ"},{"id":"T6348","span":{"begin":35,"end":39},"obj":"WDT"},{"id":"T6347","span":{"begin":27,"end":34},"obj":"NN"},{"id":"T6346","span":{"begin":20,"end":26},"obj":"NN"},{"id":"T6345","span":{"begin":14,"end":19},"obj":"CD"},{"id":"T6344","span":{"begin":5,"end":13},"obj":"JJ"},{"id":"T6343","span":{"begin":3,"end":4},"obj":"DT"},{"id":"T6342","span":{"begin":0,"end":2},"obj":"IN"}],"relations":[{"id":"R4399","pred":"det","subj":"T6343","obj":"T6347"},{"id":"R4401","pred":"amod","subj":"T6344","obj":"T6347"},{"id":"R4405","pred":"nummod","subj":"T6345","obj":"T6346"},{"id":"R4406","pred":"compound","subj":"T6346","obj":"T6347"},{"id":"R4408","pred":"pobj","subj":"T6347","obj":"T6342"},{"id":"R4409","pred":"nsubj","subj":"T6348","obj":"T6349"},{"id":"R4410","pred":"relcl","subj":"T6349","obj":"T6347"},{"id":"R4412","pred":"dobj","subj":"T6350","obj":"T6349"},{"id":"R4413","pred":"prep","subj":"T6351","obj":"T6349"},{"id":"R4415","pred":"amod","subj":"T6352","obj":"T6354"},{"id":"R4416","pred":"compound","subj":"T6353","obj":"T6354"},{"id":"R4417","pred":"pobj","subj":"T6354","obj":"T6351"},{"id":"R4418","pred":"cc","subj":"T6355","obj":"T6349"},{"id":"R4420","pred":"acomp","subj":"T6357","obj":"T6356"},{"id":"R4422","pred":"prep","subj":"T6358","obj":"T6357"},{"id":"R4423","pred":"amod","subj":"T6359","obj":"T6361"},{"id":"R4425","pred":"compound","subj":"T6360","obj":"T6361"},{"id":"R4426","pred":"pobj","subj":"T6361","obj":"T6358"}],"text":"of a distinct E2/E3 enzyme complex that modifies NEMO with linear polyubiquitin chains and is essential for TNF-activated NF-κB signalling"}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T7132","span":{"begin":108,"end":111},"obj":"Protein"},{"id":"T7131","span":{"begin":49,"end":53},"obj":"Protein"}],"text":"of a distinct E2/E3 enzyme complex that modifies NEMO with linear polyubiquitin chains and is essential for TNF-activated NF-κB signalling"}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T6900","span":{"begin":49,"end":53},"obj":"http://www.uniprot.org/uniprot/Q9Y6K9"},{"id":"T6883","span":{"begin":108,"end":111},"obj":"http://www.uniprot.org/uniprot/P01375"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"of a distinct E2/E3 enzyme complex that modifies NEMO with linear polyubiquitin chains and is essential for TNF-activated NF-κB signalling"}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T4509","span":{"begin":108,"end":111},"obj":"Protein"},{"id":"T4508","span":{"begin":49,"end":53},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"of a distinct E2/E3 enzyme complex that modifies NEMO with linear polyubiquitin chains and is essential for TNF-activated NF-κB signalling"}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T5003","span":{"begin":128,"end":138},"obj":"NN"},{"id":"T5002","span":{"begin":122,"end":127},"obj":"NN"},{"id":"T5001","span":{"begin":108,"end":121},"obj":"JJ"},{"id":"T5000","span":{"begin":104,"end":107},"obj":"IN"},{"id":"T4999","span":{"begin":94,"end":103},"obj":"JJ"},{"id":"T4998","span":{"begin":91,"end":93},"obj":"VB"},{"id":"T4997","span":{"begin":87,"end":90},"obj":"CC"},{"id":"T4996","span":{"begin":80,"end":86},"obj":"NN"},{"id":"T4995","span":{"begin":66,"end":79},"obj":"NN"},{"id":"T4994","span":{"begin":59,"end":65},"obj":"JJ"},{"id":"T4993","span":{"begin":54,"end":58},"obj":"IN"},{"id":"T4992","span":{"begin":49,"end":53},"obj":"NN"},{"id":"T4991","span":{"begin":40,"end":48},"obj":"VB"},{"id":"T4990","span":{"begin":35,"end":39},"obj":"WDT"},{"id":"T4989","span":{"begin":27,"end":34},"obj":"NN"},{"id":"T4988","span":{"begin":20,"end":26},"obj":"NN"},{"id":"T4987","span":{"begin":14,"end":19},"obj":"NN"},{"id":"T4986","span":{"begin":5,"end":13},"obj":"JJ"},{"id":"T4985","span":{"begin":3,"end":4},"obj":"DT"},{"id":"T4984","span":{"begin":0,"end":2},"obj":"IN"}],"relations":[{"id":"R3451","pred":"arg2Of","subj":"T4989","obj":"T4984"},{"id":"R3452","pred":"arg1Of","subj":"T4989","obj":"T4985"},{"id":"R3453","pred":"arg1Of","subj":"T4989","obj":"T4986"},{"id":"R3454","pred":"arg1Of","subj":"T4989","obj":"T4987"},{"id":"R3455","pred":"arg1Of","subj":"T4989","obj":"T4988"},{"id":"R3456","pred":"arg1Of","subj":"T4989","obj":"T4990"},{"id":"R3457","pred":"arg1Of","subj":"T4989","obj":"T4991"},{"id":"R3458","pred":"arg1Of","subj":"T4989","obj":"T4998"},{"id":"R3459","pred":"arg1Of","subj":"T4989","obj":"T4999"},{"id":"R3460","pred":"arg1Of","subj":"T4991","obj":"T4997"},{"id":"R3461","pred":"arg2Of","subj":"T4992","obj":"T4991"},{"id":"R3462","pred":"arg1Of","subj":"T4992","obj":"T4993"},{"id":"R3463","pred":"arg2Of","subj":"T4996","obj":"T4993"},{"id":"R3464","pred":"arg1Of","subj":"T4996","obj":"T4994"},{"id":"R3465","pred":"arg1Of","subj":"T4996","obj":"T4995"},{"id":"R3466","pred":"arg2Of","subj":"T4998","obj":"T4997"},{"id":"R3467","pred":"arg2Of","subj":"T4999","obj":"T4998"},{"id":"R3468","pred":"arg1Of","subj":"T4999","obj":"T5000"},{"id":"R3469","pred":"arg2Of","subj":"T5003","obj":"T5000"},{"id":"R3470","pred":"arg1Of","subj":"T5003","obj":"T5001"},{"id":"R3471","pred":"arg1Of","subj":"T5003","obj":"T5002"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"of a distinct E2/E3 enzyme complex that modifies NEMO with linear polyubiquitin chains and is essential for TNF-activated NF-κB signalling"}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T5585","span":{"begin":112,"end":138},"obj":"http://purl.obolibrary.org/obo/GO_1901224"},{"id":"T5584","span":{"begin":14,"end":16},"obj":"http://purl.obolibrary.org/obo/GO_0061658"},{"id":"T5583","span":{"begin":14,"end":16},"obj":"http://purl.obolibrary.org/obo/GO_0061657"},{"id":"T5582","span":{"begin":14,"end":16},"obj":"http://purl.obolibrary.org/obo/GO_0061656"},{"id":"T5581","span":{"begin":14,"end":16},"obj":"http://purl.obolibrary.org/obo/GO_0061655"},{"id":"T5580","span":{"begin":14,"end":16},"obj":"http://purl.obolibrary.org/obo/GO_0061654"},{"id":"T5579","span":{"begin":14,"end":16},"obj":"http://purl.obolibrary.org/obo/GO_0061653"},{"id":"T5578","span":{"begin":14,"end":16},"obj":"http://purl.obolibrary.org/obo/GO_0061652"},{"id":"T5577","span":{"begin":14,"end":16},"obj":"http://purl.obolibrary.org/obo/GO_0061651"},{"id":"T5576","span":{"begin":14,"end":16},"obj":"http://purl.obolibrary.org/obo/GO_0061650"},{"id":"T5575","span":{"begin":14,"end":16},"obj":"http://purl.obolibrary.org/obo/GO_0061631"},{"id":"T5572","span":{"begin":66,"end":79},"obj":"http://purl.obolibrary.org/obo/GO_0000209"},{"id":"T5566","span":{"begin":17,"end":19},"obj":"http://purl.obolibrary.org/obo/GO_0061667"},{"id":"T5563","span":{"begin":17,"end":19},"obj":"http://purl.obolibrary.org/obo/GO_0061666"},{"id":"T5560","span":{"begin":17,"end":19},"obj":"http://purl.obolibrary.org/obo/GO_0061665"},{"id":"T5557","span":{"begin":17,"end":19},"obj":"http://purl.obolibrary.org/obo/GO_0061664"},{"id":"T5554","span":{"begin":17,"end":19},"obj":"http://purl.obolibrary.org/obo/GO_0061663"},{"id":"T5551","span":{"begin":17,"end":19},"obj":"http://purl.obolibrary.org/obo/GO_0061662"},{"id":"T5548","span":{"begin":17,"end":19},"obj":"http://purl.obolibrary.org/obo/GO_0061661"},{"id":"T5545","span":{"begin":17,"end":19},"obj":"http://purl.obolibrary.org/obo/GO_0061660"},{"id":"T5542","span":{"begin":17,"end":19},"obj":"http://purl.obolibrary.org/obo/GO_0061659"},{"id":"T5539","span":{"begin":17,"end":19},"obj":"http://purl.obolibrary.org/obo/GO_0061630"},{"id":"T5536","span":{"begin":14,"end":16},"obj":"http://purl.obolibrary.org/obo/GO_0019787"},{"id":"T5533","span":{"begin":14,"end":16},"obj":"http://purl.obolibrary.org/obo/GO_0004842"},{"id":"T5528","span":{"begin":112,"end":127},"obj":"http://purl.obolibrary.org/obo/GO_0051092"},{"id":"T5506","span":{"begin":128,"end":138},"obj":"http://purl.obolibrary.org/obo/GO_0023052"},{"id":"T5501","span":{"begin":122,"end":138},"obj":"http://purl.obolibrary.org/obo/GO_0038061"}],"text":"of a distinct E2/E3 enzyme complex that modifies NEMO with linear polyubiquitin chains and is essential for TNF-activated NF-κB signalling"}

    GO-MF

    {"project":"GO-MF","denotations":[{"id":"T5670","span":{"begin":14,"end":16},"obj":"http://purl.obolibrary.org/obo/GO_0061658"},{"id":"T5669","span":{"begin":14,"end":16},"obj":"http://purl.obolibrary.org/obo/GO_0061657"},{"id":"T5668","span":{"begin":14,"end":16},"obj":"http://purl.obolibrary.org/obo/GO_0061656"},{"id":"T5667","span":{"begin":14,"end":16},"obj":"http://purl.obolibrary.org/obo/GO_0061655"},{"id":"T5666","span":{"begin":14,"end":16},"obj":"http://purl.obolibrary.org/obo/GO_0061654"},{"id":"T5665","span":{"begin":14,"end":16},"obj":"http://purl.obolibrary.org/obo/GO_0061653"},{"id":"T5664","span":{"begin":14,"end":16},"obj":"http://purl.obolibrary.org/obo/GO_0061652"},{"id":"T5663","span":{"begin":14,"end":16},"obj":"http://purl.obolibrary.org/obo/GO_0061651"},{"id":"T5629","span":{"begin":17,"end":19},"obj":"http://purl.obolibrary.org/obo/GO_0061659"},{"id":"T5626","span":{"begin":17,"end":19},"obj":"http://purl.obolibrary.org/obo/GO_0061630"},{"id":"T5623","span":{"begin":14,"end":16},"obj":"http://purl.obolibrary.org/obo/GO_0019787"},{"id":"T5620","span":{"begin":14,"end":16},"obj":"http://purl.obolibrary.org/obo/GO_0004842"},{"id":"T5662","span":{"begin":14,"end":16},"obj":"http://purl.obolibrary.org/obo/GO_0061650"},{"id":"T5661","span":{"begin":14,"end":16},"obj":"http://purl.obolibrary.org/obo/GO_0061631"},{"id":"T5653","span":{"begin":17,"end":19},"obj":"http://purl.obolibrary.org/obo/GO_0061667"},{"id":"T5650","span":{"begin":17,"end":19},"obj":"http://purl.obolibrary.org/obo/GO_0061666"},{"id":"T5647","span":{"begin":17,"end":19},"obj":"http://purl.obolibrary.org/obo/GO_0061665"},{"id":"T5644","span":{"begin":17,"end":19},"obj":"http://purl.obolibrary.org/obo/GO_0061664"},{"id":"T5641","span":{"begin":17,"end":19},"obj":"http://purl.obolibrary.org/obo/GO_0061663"},{"id":"T5638","span":{"begin":17,"end":19},"obj":"http://purl.obolibrary.org/obo/GO_0061662"},{"id":"T5635","span":{"begin":17,"end":19},"obj":"http://purl.obolibrary.org/obo/GO_0061661"},{"id":"T5632","span":{"begin":17,"end":19},"obj":"http://purl.obolibrary.org/obo/GO_0061660"}],"text":"of a distinct E2/E3 enzyme complex that modifies NEMO with linear polyubiquitin chains and is essential for TNF-activated NF-κB signalling"}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T5689","span":{"begin":20,"end":34},"obj":"http://purl.obolibrary.org/obo/GO_1902494"}],"text":"of a distinct E2/E3 enzyme complex that modifies NEMO with linear polyubiquitin chains and is essential for TNF-activated NF-κB signalling"}

    simple1

    {"project":"simple1","denotations":[{"id":"T5838","span":{"begin":108,"end":111},"obj":"Protein"},{"id":"T5837","span":{"begin":49,"end":53},"obj":"Protein"}],"text":"of a distinct E2/E3 enzyme complex that modifies NEMO with linear polyubiquitin chains and is essential for TNF-activated NF-κB signalling"}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T7938","span":{"begin":40,"end":48},"obj":"Regulation"},{"id":"T7867","span":{"begin":108,"end":111},"obj":"Protein"},{"id":"T7866","span":{"begin":49,"end":53},"obj":"Protein"}],"relations":[{"id":"R5451","pred":"themeOf","subj":"T7866","obj":"T7938"}],"text":"of a distinct E2/E3 enzyme complex that modifies NEMO with linear polyubiquitin chains and is essential for TNF-activated NF-κB signalling"}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T7059","span":{"begin":40,"end":48},"obj":"Regulation"},{"id":"T6990","span":{"begin":108,"end":111},"obj":"Protein"},{"id":"T6989","span":{"begin":49,"end":53},"obj":"Protein"}],"relations":[{"id":"R4928","pred":"themeOf","subj":"T6989","obj":"T7059"}],"text":"of a distinct E2/E3 enzyme complex that modifies NEMO with linear polyubiquitin chains and is essential for TNF-activated NF-κB signalling"}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T8199","span":{"begin":104,"end":138},"obj":"Positive_regulation"},{"id":"T8195","span":{"begin":0,"end":138},"obj":"Regulation"},{"id":"T8142","span":{"begin":49,"end":53},"obj":"Protein"},{"id":"T8139","span":{"begin":108,"end":121},"obj":"Protein"},{"id":"T7968","span":{"begin":0,"end":138},"obj":"Protein"},{"id":"T8042","span":{"begin":104,"end":138},"obj":"Protein"},{"id":"T8020","span":{"begin":66,"end":79},"obj":"Protein"},{"id":"T7978","span":{"begin":0,"end":138},"obj":"Entity"}],"relations":[{"id":"R5467","pred":"causeOf","subj":"T7978","obj":"T8195"},{"id":"R5511","pred":"themeOf","subj":"T8042","obj":"T8199"},{"id":"R5556","pred":"causeOf","subj":"T8139","obj":"T8199"},{"id":"R5558","pred":"themeOf","subj":"T8142","obj":"T8195"}],"text":"of a distinct E2/E3 enzyme complex that modifies NEMO with linear polyubiquitin chains and is essential for TNF-activated NF-κB signalling"}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T7455","span":{"begin":112,"end":121},"obj":"Positive_regulation"},{"id":"T7454","span":{"begin":122,"end":127},"obj":"Protein"},{"id":"T7453","span":{"begin":108,"end":111},"obj":"Protein"},{"id":"T7452","span":{"begin":17,"end":19},"obj":"Protein"},{"id":"T7451","span":{"begin":14,"end":16},"obj":"Protein"}],"relations":[{"id":"R5239","pred":"themeOf","subj":"T7454","obj":"T7455"},{"id":"R5260","pred":"Cause","subj":"T7455","obj":"T7453"}],"text":"of a distinct E2/E3 enzyme complex that modifies NEMO with linear polyubiquitin chains and is essential for TNF-activated NF-κB signalling"}

    test3

    {"project":"test3","denotations":[{"id":"T4032","span":{"begin":108,"end":111},"obj":"Protein"},{"id":"T4031","span":{"begin":49,"end":53},"obj":"Protein"},{"id":"T4154","span":{"begin":108,"end":111},"obj":"Protein"},{"id":"T4153","span":{"begin":49,"end":53},"obj":"Protein"}],"text":"of a distinct E2/E3 enzyme complex that modifies NEMO with linear polyubiquitin chains and is essential for TNF-activated NF-κB signalling"}