PMC:3148254 / 9665-9734 JSONTXT

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    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T15371","span":{"begin":0,"end":4},"obj":"Protein"},{"id":"T15372","span":{"begin":5,"end":13},"obj":"Positive_regulation"},{"id":"T15373","span":{"begin":14,"end":18},"obj":"Protein"},{"id":"T15374","span":{"begin":19,"end":31},"obj":"Positive_regulation"},{"id":"T15375","span":{"begin":35,"end":44},"obj":"Negative_regulation"},{"id":"T15376","span":{"begin":48,"end":52},"obj":"Protein"},{"id":"T15377","span":{"begin":53,"end":62},"obj":"Negative_regulation"}],"relations":[{"id":"R12170","pred":"causeOf","subj":"T15371","obj":"T15372"},{"id":"R12171","pred":"themeOf","subj":"T15372","obj":"T15375"},{"id":"R12172","pred":"themeOf","subj":"T15373","obj":"T15374"},{"id":"R12173","pred":"themeOf","subj":"T15374","obj":"T15372"},{"id":"R12174","pred":"themeOf","subj":"T15376","obj":"T15377"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"CD40-mediated CD80 upregulation is defective in HOIP-deficient cells."}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T15644","span":{"begin":0,"end":4},"obj":"Protein"},{"id":"T15645","span":{"begin":14,"end":18},"obj":"Protein"},{"id":"T15646","span":{"begin":19,"end":31},"obj":"Positive_regulation"},{"id":"T15647","span":{"begin":35,"end":44},"obj":"Negative_regulation"},{"id":"T15648","span":{"begin":5,"end":13},"obj":"Positive_regulation"}],"relations":[{"id":"R12390","pred":"causeOf","subj":"T15644","obj":"T15648"},{"id":"R12391","pred":"themeOf","subj":"T15645","obj":"T15646"},{"id":"R12392","pred":"themeOf","subj":"T15646","obj":"T15647"},{"id":"R12393","pred":"themeOf","subj":"T15646","obj":"T15648"}],"text":"CD40-mediated CD80 upregulation is defective in HOIP-deficient cells."}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T15658","span":{"begin":0,"end":4},"obj":"Protein"},{"id":"T15659","span":{"begin":5,"end":13},"obj":"Positive_regulation"},{"id":"T15660","span":{"begin":14,"end":18},"obj":"Protein"},{"id":"T15661","span":{"begin":19,"end":31},"obj":"Positive_regulation"},{"id":"T15662","span":{"begin":35,"end":44},"obj":"Negative_regulation"},{"id":"T15663","span":{"begin":48,"end":52},"obj":"Protein"},{"id":"T15664","span":{"begin":53,"end":62},"obj":"Negative_regulation"}],"relations":[{"id":"R12397","pred":"causeOf","subj":"T15658","obj":"T15659"},{"id":"R12398","pred":"themeOf","subj":"T15659","obj":"T15662"},{"id":"R12399","pred":"themeOf","subj":"T15660","obj":"T15661"},{"id":"R12400","pred":"themeOf","subj":"T15661","obj":"T15659"},{"id":"R12401","pred":"themeOf","subj":"T15663","obj":"T15664"}],"text":"CD40-mediated CD80 upregulation is defective in HOIP-deficient cells."}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T15490","span":{"begin":0,"end":13},"obj":"JJ"},{"id":"T15491","span":{"begin":14,"end":18},"obj":"NN"},{"id":"T15492","span":{"begin":19,"end":31},"obj":"NN"},{"id":"T15493","span":{"begin":32,"end":34},"obj":"VB"},{"id":"T15494","span":{"begin":35,"end":44},"obj":"JJ"},{"id":"T15495","span":{"begin":45,"end":47},"obj":"IN"},{"id":"T15496","span":{"begin":48,"end":62},"obj":"JJ"},{"id":"T15497","span":{"begin":63,"end":68},"obj":"NN"}],"relations":[{"id":"R12278","pred":"arg1Of","subj":"T15492","obj":"T15490"},{"id":"R12279","pred":"arg1Of","subj":"T15492","obj":"T15491"},{"id":"R12280","pred":"arg1Of","subj":"T15492","obj":"T15493"},{"id":"R12281","pred":"arg1Of","subj":"T15492","obj":"T15494"},{"id":"R12282","pred":"arg1Of","subj":"T15493","obj":"T15495"},{"id":"R12283","pred":"arg2Of","subj":"T15494","obj":"T15493"},{"id":"R12284","pred":"arg2Of","subj":"T15497","obj":"T15495"},{"id":"R12285","pred":"arg1Of","subj":"T15497","obj":"T15496"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"CD40-mediated CD80 upregulation is defective in HOIP-deficient cells."}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T15392","span":{"begin":0,"end":13},"obj":"JJ"},{"id":"T15393","span":{"begin":14,"end":18},"obj":"NN"},{"id":"T15394","span":{"begin":19,"end":31},"obj":"NN"},{"id":"T15395","span":{"begin":32,"end":34},"obj":"VBZ"},{"id":"T15396","span":{"begin":35,"end":44},"obj":"JJ"},{"id":"T15397","span":{"begin":45,"end":47},"obj":"IN"},{"id":"T15398","span":{"begin":48,"end":62},"obj":"JJ"},{"id":"T15399","span":{"begin":63,"end":68},"obj":"NNS"},{"id":"T15400","span":{"begin":68,"end":69},"obj":"."}],"relations":[{"id":"R12180","pred":"amod","subj":"T15392","obj":"T15394"},{"id":"R12181","pred":"compound","subj":"T15393","obj":"T15394"},{"id":"R12182","pred":"nsubj","subj":"T15394","obj":"T15395"},{"id":"R12183","pred":"ROOT","subj":"T15395","obj":"T15395"},{"id":"R12184","pred":"acomp","subj":"T15396","obj":"T15395"},{"id":"R12185","pred":"prep","subj":"T15397","obj":"T15396"},{"id":"R12186","pred":"amod","subj":"T15398","obj":"T15399"},{"id":"R12187","pred":"pobj","subj":"T15399","obj":"T15397"},{"id":"R12188","pred":"punct","subj":"T15400","obj":"T15395"}],"text":"CD40-mediated CD80 upregulation is defective in HOIP-deficient cells."}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T15601","span":{"begin":63,"end":68},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"CD40-mediated CD80 upregulation is defective in HOIP-deficient cells."}

    sentences

    {"project":"sentences","denotations":[{"id":"T15388","span":{"begin":0,"end":69},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"CD40-mediated CD80 upregulation is defective in HOIP-deficient cells."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T15581","span":{"begin":0,"end":4},"obj":"P25942"},{"id":"T15582","span":{"begin":14,"end":18},"obj":"P33681"},{"id":"T15583","span":{"begin":48,"end":52},"obj":"Q96EP0"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"CD40-mediated CD80 upregulation is defective in HOIP-deficient cells."}

    test2

    {"project":"test2","denotations":[{"id":"T15355","span":{"begin":0,"end":4},"obj":"Protein"},{"id":"T15356","span":{"begin":5,"end":13},"obj":"Positive_regulation"},{"id":"T15357","span":{"begin":14,"end":18},"obj":"Protein"},{"id":"T15358","span":{"begin":19,"end":31},"obj":"Positive_regulation"},{"id":"T15359","span":{"begin":35,"end":44},"obj":"Negative_regulation"},{"id":"T15360","span":{"begin":48,"end":52},"obj":"Protein"},{"id":"T15361","span":{"begin":53,"end":62},"obj":"Negative_regulation"}],"relations":[{"id":"R12159","pred":"causeOf","subj":"T15355","obj":"T15356"},{"id":"R12160","pred":"themeOf","subj":"T15356","obj":"T15359"},{"id":"R12161","pred":"themeOf","subj":"T15357","obj":"T15358"},{"id":"R12162","pred":"themeOf","subj":"T15358","obj":"T15356"},{"id":"R12163","pred":"themeOf","subj":"T15358","obj":"T15359"},{"id":"R12164","pred":"themeOf","subj":"T15360","obj":"T15361"},{"id":"R12165","pred":"causeOf","subj":"T15361","obj":"T15359"}],"attributes":[{"id":"M122","pred":"Speculation","subj":"T15359","obj":"true"}],"text":"CD40-mediated CD80 upregulation is defective in HOIP-deficient cells."}