PMC:3148254 / 913-1089 JSONTXT

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    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T93","span":{"begin":73,"end":78},"obj":"Protein"},{"id":"T94","span":{"begin":79,"end":87},"obj":"Positive_regulation"},{"id":"T95","span":{"begin":88,"end":99},"obj":"Binding"},{"id":"T96","span":{"begin":103,"end":130},"obj":"Protein"},{"id":"T97","span":{"begin":132,"end":136},"obj":"Protein"},{"id":"T98","span":{"begin":145,"end":163},"obj":"Entity"},{"id":"T99","span":{"begin":167,"end":171},"obj":"Protein"}],"relations":[{"id":"R42","pred":"causeOf","subj":"T93","obj":"T94"},{"id":"R43","pred":"themeOf","subj":"T95","obj":"T94"},{"id":"R44","pred":"themeOf","subj":"T96","obj":"T95"},{"id":"R45","pred":"equivalentTo","subj":"T97","obj":"T96"},{"id":"R46","pred":"partOf","subj":"T98","obj":"T99"},{"id":"R47","pred":"themeOf","subj":"T98","obj":"T95"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"AF) family of proteins. We previously showed that the TRAF family member TRAF2 mediates recruitment of HOIL-1L-interacting protein (HOIP) to the cytoplasmic domain of CD40, sug"}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T908","span":{"begin":54,"end":58},"obj":"Protein"},{"id":"T909","span":{"begin":73,"end":78},"obj":"Protein"},{"id":"T910","span":{"begin":103,"end":130},"obj":"Protein"},{"id":"T911","span":{"begin":132,"end":136},"obj":"Protein"},{"id":"T912","span":{"begin":167,"end":171},"obj":"Protein"},{"id":"T914","span":{"begin":157,"end":163},"obj":"Entity"},{"id":"T915","span":{"begin":88,"end":99},"obj":"Binding"},{"id":"T916","span":{"begin":88,"end":99},"obj":"Binding"},{"id":"T917","span":{"begin":88,"end":99},"obj":"Binding"},{"id":"T918","span":{"begin":88,"end":99},"obj":"Binding"}],"relations":[{"id":"R657","pred":"themeOf","subj":"T910","obj":"T917"},{"id":"R658","pred":"themeOf","subj":"T911","obj":"T915"},{"id":"R659","pred":"themeOf","subj":"T911","obj":"T918"},{"id":"R660","pred":"themeOf","subj":"T912","obj":"T916"},{"id":"R661","pred":"themeOf","subj":"T912","obj":"T917"},{"id":"R662","pred":"themeOf","subj":"T912","obj":"T918"},{"id":"R663","pred":"partOf","subj":"T912","obj":"T914"},{"id":"R664","pred":"Site","subj":"T914","obj":"T915"},{"id":"R665","pred":"Site","subj":"T914","obj":"T916"},{"id":"R666","pred":"Site","subj":"T914","obj":"T917"},{"id":"R667","pred":"Site","subj":"T914","obj":"T918"}],"text":"AF) family of proteins. We previously showed that the TRAF family member TRAF2 mediates recruitment of HOIL-1L-interacting protein (HOIP) to the cytoplasmic domain of CD40, sug"}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T953","span":{"begin":73,"end":78},"obj":"Protein"},{"id":"T954","span":{"begin":79,"end":87},"obj":"Positive_regulation"},{"id":"T955","span":{"begin":88,"end":99},"obj":"Binding"},{"id":"T956","span":{"begin":103,"end":130},"obj":"Protein"},{"id":"T957","span":{"begin":132,"end":136},"obj":"Protein"},{"id":"T958","span":{"begin":145,"end":163},"obj":"Entity"},{"id":"T959","span":{"begin":167,"end":171},"obj":"Protein"}],"relations":[{"id":"R684","pred":"causeOf","subj":"T953","obj":"T954"},{"id":"R685","pred":"themeOf","subj":"T955","obj":"T954"},{"id":"R686","pred":"themeOf","subj":"T956","obj":"T955"},{"id":"R687","pred":"equivalentTo","subj":"T957","obj":"T956"},{"id":"R688","pred":"partOf","subj":"T958","obj":"T959"},{"id":"R689","pred":"themeOf","subj":"T958","obj":"T955"}],"text":"AF) family of proteins. We previously showed that the TRAF family member TRAF2 mediates recruitment of HOIL-1L-interacting protein (HOIP) to the cytoplasmic domain of CD40, sug"}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T556","span":{"begin":2,"end":3},"obj":"-RRB-"},{"id":"T557","span":{"begin":4,"end":10},"obj":"NN"},{"id":"T558","span":{"begin":11,"end":13},"obj":"IN"},{"id":"T559","span":{"begin":14,"end":22},"obj":"NN"},{"id":"T560","span":{"begin":24,"end":26},"obj":"PRP"},{"id":"T561","span":{"begin":27,"end":37},"obj":"RB"},{"id":"T562","span":{"begin":38,"end":44},"obj":"VB"},{"id":"T563","span":{"begin":45,"end":49},"obj":"IN"},{"id":"T564","span":{"begin":50,"end":53},"obj":"DT"},{"id":"T565","span":{"begin":54,"end":58},"obj":"NN"},{"id":"T566","span":{"begin":59,"end":65},"obj":"NN"},{"id":"T567","span":{"begin":66,"end":72},"obj":"NN"},{"id":"T568","span":{"begin":73,"end":78},"obj":"NN"},{"id":"T569","span":{"begin":79,"end":87},"obj":"VB"},{"id":"T570","span":{"begin":88,"end":99},"obj":"NN"},{"id":"T571","span":{"begin":100,"end":102},"obj":"IN"},{"id":"T572","span":{"begin":103,"end":122},"obj":"JJ"},{"id":"T573","span":{"begin":123,"end":130},"obj":"NN"},{"id":"T574","span":{"begin":131,"end":132},"obj":"-LRB-"},{"id":"T575","span":{"begin":132,"end":136},"obj":"NN"},{"id":"T576","span":{"begin":136,"end":137},"obj":"-RRB-"},{"id":"T577","span":{"begin":138,"end":140},"obj":"TO"},{"id":"T578","span":{"begin":141,"end":144},"obj":"DT"},{"id":"T579","span":{"begin":145,"end":156},"obj":"JJ"},{"id":"T580","span":{"begin":157,"end":163},"obj":"NN"},{"id":"T581","span":{"begin":164,"end":166},"obj":"IN"},{"id":"T582","span":{"begin":167,"end":171},"obj":"NN"},{"id":"T583","span":{"begin":171,"end":172},"obj":"-COMMA-"}],"relations":[{"id":"R477","pred":"arg1Of","subj":"T557","obj":"T558"},{"id":"R478","pred":"arg2Of","subj":"T559","obj":"T558"},{"id":"R479","pred":"arg1Of","subj":"T560","obj":"T562"},{"id":"R480","pred":"arg1Of","subj":"T562","obj":"T561"},{"id":"R481","pred":"arg1Of","subj":"T568","obj":"T564"},{"id":"R482","pred":"arg1Of","subj":"T568","obj":"T565"},{"id":"R483","pred":"arg1Of","subj":"T568","obj":"T566"},{"id":"R484","pred":"arg1Of","subj":"T568","obj":"T567"},{"id":"R485","pred":"arg1Of","subj":"T568","obj":"T569"},{"id":"R486","pred":"arg2Of","subj":"T569","obj":"T562"},{"id":"R487","pred":"arg1Of","subj":"T569","obj":"T563"},{"id":"R488","pred":"arg1Of","subj":"T569","obj":"T583"},{"id":"R489","pred":"arg2Of","subj":"T570","obj":"T569"},{"id":"R490","pred":"arg1Of","subj":"T570","obj":"T571"},{"id":"R491","pred":"arg1Of","subj":"T570","obj":"T577"},{"id":"R492","pred":"arg2Of","subj":"T573","obj":"T571"},{"id":"R493","pred":"arg1Of","subj":"T573","obj":"T572"},{"id":"R494","pred":"arg1Of","subj":"T573","obj":"T574"},{"id":"R495","pred":"arg2Of","subj":"T575","obj":"T574"},{"id":"R496","pred":"arg3Of","subj":"T576","obj":"T574"},{"id":"R497","pred":"arg2Of","subj":"T580","obj":"T577"},{"id":"R498","pred":"arg1Of","subj":"T580","obj":"T578"},{"id":"R499","pred":"arg1Of","subj":"T580","obj":"T579"},{"id":"R500","pred":"arg1Of","subj":"T580","obj":"T581"},{"id":"R501","pred":"arg2Of","subj":"T582","obj":"T581"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"AF) family of proteins. We previously showed that the TRAF family member TRAF2 mediates recruitment of HOIL-1L-interacting protein (HOIP) to the cytoplasmic domain of CD40, sug"}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T271","span":{"begin":2,"end":3},"obj":"-RRB-"},{"id":"T272","span":{"begin":4,"end":10},"obj":"NN"},{"id":"T273","span":{"begin":11,"end":13},"obj":"IN"},{"id":"T274","span":{"begin":14,"end":22},"obj":"NNS"},{"id":"T275","span":{"begin":22,"end":23},"obj":"."},{"id":"T276","span":{"begin":24,"end":26},"obj":"PRP"},{"id":"T277","span":{"begin":27,"end":37},"obj":"RB"},{"id":"T278","span":{"begin":38,"end":44},"obj":"VBD"},{"id":"T279","span":{"begin":45,"end":49},"obj":"IN"},{"id":"T280","span":{"begin":50,"end":53},"obj":"DT"},{"id":"T281","span":{"begin":54,"end":58},"obj":"NNP"},{"id":"T282","span":{"begin":59,"end":65},"obj":"NN"},{"id":"T283","span":{"begin":66,"end":72},"obj":"NN"},{"id":"T284","span":{"begin":73,"end":78},"obj":"CD"},{"id":"T285","span":{"begin":79,"end":87},"obj":"VBZ"},{"id":"T286","span":{"begin":88,"end":99},"obj":"NN"},{"id":"T287","span":{"begin":100,"end":102},"obj":"IN"},{"id":"T288","span":{"begin":103,"end":122},"obj":"JJ"},{"id":"T289","span":{"begin":123,"end":130},"obj":"NN"},{"id":"T290","span":{"begin":131,"end":132},"obj":"-LRB-"},{"id":"T291","span":{"begin":132,"end":136},"obj":"NNP"},{"id":"T292","span":{"begin":136,"end":137},"obj":"-RRB-"},{"id":"T293","span":{"begin":138,"end":140},"obj":"TO"},{"id":"T294","span":{"begin":141,"end":144},"obj":"DT"},{"id":"T295","span":{"begin":145,"end":156},"obj":"JJ"},{"id":"T296","span":{"begin":157,"end":163},"obj":"NN"},{"id":"T297","span":{"begin":164,"end":166},"obj":"IN"},{"id":"T298","span":{"begin":167,"end":171},"obj":"NNP"},{"id":"T299","span":{"begin":171,"end":172},"obj":","}],"relations":[{"id":"R195","pred":"prep","subj":"T273","obj":"T272"},{"id":"R196","pred":"pobj","subj":"T274","obj":"T273"},{"id":"R198","pred":"nsubj","subj":"T276","obj":"T278"},{"id":"R199","pred":"advmod","subj":"T277","obj":"T278"},{"id":"R200","pred":"ROOT","subj":"T278","obj":"T278"},{"id":"R201","pred":"mark","subj":"T279","obj":"T285"},{"id":"R202","pred":"det","subj":"T280","obj":"T283"},{"id":"R203","pred":"compound","subj":"T281","obj":"T283"},{"id":"R204","pred":"compound","subj":"T282","obj":"T283"},{"id":"R205","pred":"nsubj","subj":"T283","obj":"T285"},{"id":"R206","pred":"nummod","subj":"T284","obj":"T285"},{"id":"R207","pred":"ccomp","subj":"T285","obj":"T278"},{"id":"R208","pred":"dobj","subj":"T286","obj":"T285"},{"id":"R209","pred":"prep","subj":"T287","obj":"T286"},{"id":"R210","pred":"amod","subj":"T288","obj":"T289"},{"id":"R211","pred":"pobj","subj":"T289","obj":"T287"},{"id":"R212","pred":"punct","subj":"T290","obj":"T291"},{"id":"R213","pred":"appos","subj":"T291","obj":"T289"},{"id":"R214","pred":"punct","subj":"T292","obj":"T285"},{"id":"R215","pred":"prep","subj":"T293","obj":"T285"},{"id":"R216","pred":"det","subj":"T294","obj":"T296"},{"id":"R217","pred":"amod","subj":"T295","obj":"T296"},{"id":"R218","pred":"pobj","subj":"T296","obj":"T293"},{"id":"R219","pred":"prep","subj":"T297","obj":"T296"},{"id":"R220","pred":"pobj","subj":"T298","obj":"T297"},{"id":"R221","pred":"punct","subj":"T299","obj":"T285"}],"text":"AF) family of proteins. We previously showed that the TRAF family member TRAF2 mediates recruitment of HOIL-1L-interacting protein (HOIP) to the cytoplasmic domain of CD40, sug"}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T718","span":{"begin":73,"end":78},"obj":"Q12933"},{"id":"T719","span":{"begin":103,"end":130},"obj":"Q96EP0"},{"id":"T720","span":{"begin":132,"end":136},"obj":"Q96EP0"},{"id":"T721","span":{"begin":167,"end":171},"obj":"P25942"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"AF) family of proteins. We previously showed that the TRAF family member TRAF2 mediates recruitment of HOIL-1L-interacting protein (HOIP) to the cytoplasmic domain of CD40, sug"}

    test2

    {"project":"test2","denotations":[{"id":"T53","span":{"begin":73,"end":78},"obj":"Protein"},{"id":"T54","span":{"begin":79,"end":87},"obj":"Positive_regulation"},{"id":"T55","span":{"begin":88,"end":99},"obj":"Binding"},{"id":"T56","span":{"begin":103,"end":130},"obj":"Protein"},{"id":"T57","span":{"begin":132,"end":136},"obj":"Protein"},{"id":"T58","span":{"begin":145,"end":163},"obj":"Entity"},{"id":"T59","span":{"begin":167,"end":171},"obj":"Protein"}],"relations":[{"id":"R24","pred":"causeOf","subj":"T53","obj":"T54"},{"id":"R25","pred":"themeOf","subj":"T55","obj":"T54"},{"id":"R26","pred":"themeOf","subj":"T56","obj":"T55"},{"id":"R27","pred":"equivalentTo","subj":"T57","obj":"T56"},{"id":"R28","pred":"themeOf","subj":"T58","obj":"T55"},{"id":"R29","pred":"partOf","subj":"T58","obj":"T59"}],"text":"AF) family of proteins. We previously showed that the TRAF family member TRAF2 mediates recruitment of HOIL-1L-interacting protein (HOIP) to the cytoplasmic domain of CD40, sug"}