PMC:3148254 / 809-936
Annnotations
bionlp-st-ge-2016-reference-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T905 | 24-28 | Protein | denotes | CD40 |
| T906 | 70-100 | Protein | denotes | TNF receptor-associated factor |
| T907 | 102-106 | Protein | denotes | TRAF |
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T540 | 0-5 | VB | denotes | Known |
| T541 | 6-16 | NN | denotes | components |
| T542 | 17-19 | IN | denotes | of |
| T543 | 20-23 | DT | denotes | the |
| T544 | 24-28 | NN | denotes | CD40 |
| T545 | 29-38 | NN | denotes | signaling |
| T546 | 39-46 | NN | denotes | complex |
| T547 | 47-54 | VB | denotes | include |
| T548 | 55-62 | NN | denotes | members |
| T549 | 63-65 | IN | denotes | of |
| T550 | 66-69 | DT | denotes | the |
| T551 | 70-73 | NN | denotes | TNF |
| T552 | 74-93 | JJ | denotes | receptor-associated |
| T553 | 94-100 | NN | denotes | factor |
| T554 | 101-102 | -LRB- | denotes | ( |
| T555 | 102-106 | NN | denotes | TRAF |
| T556 | 106-107 | -RRB- | denotes | ) |
| T557 | 108-114 | NN | denotes | family |
| T558 | 115-117 | IN | denotes | of |
| T559 | 118-126 | NN | denotes | proteins |
| R460 | T541 | T540 | arg2Of | components,Known |
| R461 | T541 | T542 | arg1Of | components,of |
| R462 | T541 | T547 | arg1Of | components,include |
| R463 | T546 | T542 | arg2Of | complex,of |
| R464 | T546 | T543 | arg1Of | complex,the |
| R465 | T546 | T544 | arg1Of | complex,CD40 |
| R466 | T546 | T545 | arg1Of | complex,signaling |
| R467 | T548 | T547 | arg2Of | members,include |
| R468 | T548 | T549 | arg1Of | members,of |
| R469 | T553 | T551 | arg1Of | factor,TNF |
| R470 | T553 | T552 | arg1Of | factor,receptor-associated |
| R471 | T553 | T554 | arg1Of | factor,( |
| R472 | T555 | T554 | arg2Of | TRAF,( |
| R473 | T556 | T554 | arg3Of | ),( |
| R474 | T557 | T549 | arg2Of | family,of |
| R475 | T557 | T550 | arg1Of | family,the |
| R476 | T557 | T553 | arg1Of | family,factor |
| R477 | T557 | T558 | arg1Of | family,of |
| R478 | T559 | T558 | arg2Of | proteins,of |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T255 | 0-5 | VBN | denotes | Known |
| T256 | 6-16 | NNS | denotes | components |
| T257 | 17-19 | IN | denotes | of |
| T258 | 20-23 | DT | denotes | the |
| T259 | 24-28 | NNP | denotes | CD40 |
| T260 | 29-38 | VBG | denotes | signaling |
| T261 | 39-46 | JJ | denotes | complex |
| T262 | 47-54 | VBP | denotes | include |
| T263 | 55-62 | NNS | denotes | members |
| T264 | 63-65 | IN | denotes | of |
| T265 | 66-69 | DT | denotes | the |
| T266 | 70-73 | NNP | denotes | TNF |
| T267 | 74-93 | JJ | denotes | receptor-associated |
| T268 | 94-100 | NN | denotes | factor |
| T269 | 101-102 | -LRB- | denotes | ( |
| T270 | 102-106 | NNP | denotes | TRAF |
| T271 | 106-107 | -RRB- | denotes | ) |
| T272 | 108-114 | NN | denotes | family |
| T273 | 115-117 | IN | denotes | of |
| T274 | 118-126 | NNS | denotes | proteins |
| T275 | 126-127 | . | denotes | . |
| R177 | T255 | T256 | amod | Known,components |
| R178 | T256 | T262 | nsubj | components,include |
| R179 | T257 | T256 | prep | of,components |
| R180 | T258 | T259 | det | the,CD40 |
| R181 | T259 | T257 | pobj | CD40,of |
| R182 | T260 | T256 | acl | signaling,components |
| R183 | T261 | T260 | pcomp | complex,signaling |
| R184 | T262 | T262 | ROOT | include,include |
| R185 | T263 | T262 | dobj | members,include |
| R186 | T264 | T263 | prep | of,members |
| R187 | T265 | T268 | det | the,factor |
| R188 | T266 | T268 | nmod | TNF,factor |
| R189 | T267 | T268 | amod | receptor-associated,factor |
| R190 | T268 | T264 | pobj | factor,of |
| R191 | T269 | T270 | punct | (,TRAF |
| R192 | T270 | T268 | appos | TRAF,factor |
| R193 | T271 | T270 | punct | ),TRAF |
| R194 | T272 | T263 | conj | family,members |
| R195 | T273 | T272 | prep | of,family |
| R196 | T274 | T273 | pobj | proteins,of |
| R197 | T275 | T262 | punct | .,include |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T760 | 29-38 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signaling |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T127 | 0-127 | Sentence | denotes | Known components of the CD40 signaling complex include members of the TNF receptor-associated factor (TRAF) family of proteins. |
| T8 | 0-127 | Sentence | denotes | Known components of the CD40 signaling complex include members of the TNF receptor-associated factor (TRAF) family of proteins. |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T713 | 24-28 | P25942 | denotes | CD40 |
| T714 | 70-73 | P01375 | denotes | TNF |
| T715 | 70-100 | Q13114 | denotes | TNF receptor-associated factor |
| T716 | 70-100 | Q12933 | denotes | TNF receptor-associated factor |
| T717 | 70-100 | Q9Y4K3 | denotes | TNF receptor-associated factor |