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PMC:3148254 / 7735-7950 JSONTXT

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bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T14783 183-187 Protein denotes HOIP
T14784 188-197 Negative_regulation denotes deficient
T14785 199-203 Protein denotes HOIP
R11696 T14783 T14784 themeOf HOIP,deficient

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T15312 88-101 Protein denotes NeoR sequence
T15313 72-80 Negative_regulation denotes deletion
R12139 T15312 T15313 themeOf NeoR sequence,deletion

events-check-again

Id Subject Object Predicate Lexical cue
T15324 183-187 Protein denotes HOIP
T15325 188-197 Negative_regulation denotes deficient
T15326 199-203 Protein denotes HOIP
R12142 T15324 T15325 themeOf HOIP,deficient

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T15140 0-3 DT denotes The
T15141 4-10 NN denotes SV40pA
T15142 11-19 NN denotes sequence
T15143 20-25 VB denotes helps
T15144 26-28 TO denotes to
T15145 29-35 VB denotes ensure
T15146 36-46 NN denotes disruption
T15147 47-49 IN denotes of
T15148 50-54 NN denotes gene
T15149 55-65 NN denotes expression
T15150 66-71 IN denotes after
T15151 72-80 NN denotes deletion
T15152 81-83 IN denotes of
T15153 84-87 DT denotes the
T15154 88-92 NN denotes NeoR
T15155 93-102 NN denotes sequence.
T15156 103-104 -LRB- denotes (
T15157 104-105 NN denotes B
T15158 105-106 -RRB- denotes )
T15159 107-116 NN denotes Anti-HOIP
T15160 117-120 CC denotes and
T15161 121-130 JJ denotes anti-FLAG
T15162 131-138 JJ denotes Western
T15163 139-144 NN denotes blots
T15164 145-147 IN denotes of
T15165 148-152 NN denotes cell
T15166 153-160 NN denotes lysates
T15167 161-165 IN denotes from
T15168 166-172 NN denotes A20.2J
T15169 173-178 NN denotes cells
T15170 179-182 CC denotes and
T15171 183-197 JJ denotes HOIP-deficient
T15172 198-199 -LRB- denotes (
T15173 199-206 JJ denotes HOIP-/-
T15174 206-207 -RRB- denotes )
T15175 208-214 NN denotes clones
R12032 T15142 T15140 arg1Of sequence,The
R12033 T15142 T15141 arg1Of sequence,SV40pA
R12034 T15142 T15143 arg1Of sequence,helps
R12035 T15142 T15145 arg1Of sequence,ensure
R12036 T15145 T15143 arg2Of ensure,helps
R12037 T15145 T15144 arg1Of ensure,to
R12038 T15146 T15147 arg1Of disruption,of
R12039 T15146 T15150 arg1Of disruption,after
R12040 T15146 T15160 arg1Of disruption,and
R12041 T15149 T15147 arg2Of expression,of
R12042 T15149 T15148 arg1Of expression,gene
R12043 T15151 T15150 arg2Of deletion,after
R12044 T15151 T15152 arg1Of deletion,of
R12045 T15155 T15154 arg1Of sequence.,NeoR
R12046 T15155 T15156 arg1Of sequence.,(
R12047 T15157 T15156 arg2Of B,(
R12048 T15158 T15156 arg3Of ),(
R12049 T15159 T15152 arg2Of Anti-HOIP,of
R12050 T15159 T15153 arg1Of Anti-HOIP,the
R12051 T15159 T15155 arg1Of Anti-HOIP,sequence.
R12052 T15160 T15145 arg2Of and,ensure
R12053 T15163 T15160 arg2Of blots,and
R12054 T15163 T15161 arg1Of blots,anti-FLAG
R12055 T15163 T15162 arg1Of blots,Western
R12056 T15163 T15164 arg1Of blots,of
R12057 T15166 T15165 arg1Of lysates,cell
R12058 T15166 T15167 arg1Of lysates,from
R12059 T15166 T15170 arg1Of lysates,and
R12060 T15169 T15167 arg2Of cells,from
R12061 T15169 T15168 arg1Of cells,A20.2J
R12062 T15170 T15164 arg2Of and,of
R12063 T15171 T15172 arg1Of HOIP-deficient,(
R12064 T15173 T15172 arg2Of HOIP-/-,(
R12065 T15174 T15172 arg3Of ),(
R12066 T15175 T15170 arg2Of clones,and
R12067 T15175 T15171 arg1Of clones,HOIP-deficient

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T14926 0-3 DT denotes The
T14927 4-10 NNP denotes SV40pA
T14928 11-19 NN denotes sequence
T14929 20-25 VBZ denotes helps
T14930 26-28 TO denotes to
T14931 29-35 VB denotes ensure
T14932 36-46 NN denotes disruption
T14933 47-49 IN denotes of
T14934 50-54 NN denotes gene
T14935 55-65 NN denotes expression
T14936 66-71 IN denotes after
T14937 72-80 NN denotes deletion
T14938 81-83 IN denotes of
T14939 84-87 DT denotes the
T14940 88-92 NNP denotes NeoR
T14941 93-101 NN denotes sequence
T14942 101-102 . denotes .
T14943 103-104 -LRB- denotes (
T14944 104-105 NNP denotes B
T14945 105-106 -RRB- denotes )
T14946 107-116 NNP denotes Anti-HOIP
T14947 117-120 CC denotes and
T14948 121-130 NNP denotes anti-FLAG
T14949 131-138 NNP denotes Western
T14950 139-144 NNS denotes blots
T14951 145-147 IN denotes of
T14952 148-152 NN denotes cell
T14953 153-160 NNS denotes lysates
T14954 161-165 IN denotes from
T14955 166-169 NNP denotes A20
T14956 169-171 CD denotes .2
T14957 171-172 NNP denotes J
T14958 173-178 NNS denotes cells
T14959 179-182 CC denotes and
T14960 183-197 JJ denotes HOIP-deficient
T14961 198-199 -LRB- denotes (
T14962 199-203 SYM denotes HOIP
T14963 203-204 : denotes -
T14964 204-205 SYM denotes /
T14965 205-206 : denotes -
T14966 206-207 -RRB- denotes )
T14967 208-214 NNS denotes clones
T14968 214-215 . denotes .
R11822 T14926 T14928 det The,sequence
R11823 T14927 T14928 compound SV40pA,sequence
R11824 T14928 T14929 nsubj sequence,helps
R11825 T14929 T14929 ROOT helps,helps
R11826 T14930 T14931 aux to,ensure
R11827 T14931 T14929 xcomp ensure,helps
R11828 T14932 T14931 dobj disruption,ensure
R11829 T14933 T14932 prep of,disruption
R11830 T14934 T14935 compound gene,expression
R11831 T14935 T14933 pobj expression,of
R11832 T14936 T14931 prep after,ensure
R11833 T14937 T14936 pobj deletion,after
R11834 T14938 T14937 prep of,deletion
R11835 T14939 T14941 det the,sequence
R11836 T14940 T14941 compound NeoR,sequence
R11837 T14941 T14938 pobj sequence,of
R11838 T14942 T14929 punct .,helps
R11839 T14943 T14946 punct (,Anti-HOIP
R11840 T14944 T14946 nmod B,Anti-HOIP
R11841 T14945 T14946 punct ),Anti-HOIP
R11842 T14946 T14950 nmod Anti-HOIP,blots
R11843 T14947 T14946 cc and,Anti-HOIP
R11844 T14948 T14949 compound anti-FLAG,Western
R11845 T14949 T14946 conj Western,Anti-HOIP
R11846 T14950 T14950 ROOT blots,blots
R11847 T14951 T14950 prep of,blots
R11848 T14952 T14953 compound cell,lysates
R11849 T14953 T14951 pobj lysates,of
R11850 T14954 T14950 prep from,blots
R11851 T14955 T14958 compound A20,cells
R11852 T14956 T14957 compound .2,J
R11853 T14957 T14958 compound J,cells
R11854 T14958 T14954 pobj cells,from
R11855 T14959 T14958 cc and,cells
R11856 T14960 T14958 conj HOIP-deficient,cells
R11857 T14961 T14967 punct (,clones
R11858 T14962 T14967 dep HOIP,clones
R11859 T14963 T14967 punct -,clones
R11860 T14964 T14967 amod /,clones
R11861 T14965 T14964 punct -,/
R11862 T14966 T14964 punct ),/
R11863 T14967 T14958 conj clones,cells
R11864 T14968 T14950 punct .,blots

GO-BP

Id Subject Object Predicate Lexical cue
T15254 50-65 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression

GO-CC

Id Subject Object Predicate Lexical cue
T15260 173-178 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T14803 0-215 Sentence denotes The SV40pA sequence helps to ensure disruption of gene expression after deletion of the NeoR sequence. (B) Anti-HOIP and anti-FLAG Western blots of cell lysates from A20.2J cells and HOIP-deficient (HOIP-/-) clones.
T55 0-215 Sentence denotes The SV40pA sequence helps to ensure disruption of gene expression after deletion of the NeoR sequence. (B) Anti-HOIP and anti-FLAG Western blots of cell lysates from A20.2J cells and HOIP-deficient (HOIP-/-) clones.

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T15234 112-116 Q96EP0 denotes HOIP
T15235 166-169 P21580 denotes A20
T15236 183-187 Q96EP0 denotes HOIP
T15237 199-203 Q96EP0 denotes HOIP

test2

Id Subject Object Predicate Lexical cue
T14765 183-187 Protein denotes HOIP
T14766 188-197 Negative_regulation denotes deficient
T14767 199-203 Protein denotes HOIP
R11690 T14765 T14766 themeOf HOIP,deficient