PMC:3148254 / 7735-7950
Annnotations
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14783 | 183-187 | Protein | denotes | HOIP |
T14784 | 188-197 | Negative_regulation | denotes | deficient |
T14785 | 199-203 | Protein | denotes | HOIP |
R11696 | T14783 | T14784 | themeOf | HOIP,deficient |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15312 | 88-101 | Protein | denotes | NeoR sequence |
T15313 | 72-80 | Negative_regulation | denotes | deletion |
R12139 | T15312 | T15313 | themeOf | NeoR sequence,deletion |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15324 | 183-187 | Protein | denotes | HOIP |
T15325 | 188-197 | Negative_regulation | denotes | deficient |
T15326 | 199-203 | Protein | denotes | HOIP |
R12142 | T15324 | T15325 | themeOf | HOIP,deficient |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15140 | 0-3 | DT | denotes | The |
T15141 | 4-10 | NN | denotes | SV40pA |
T15142 | 11-19 | NN | denotes | sequence |
T15143 | 20-25 | VB | denotes | helps |
T15144 | 26-28 | TO | denotes | to |
T15145 | 29-35 | VB | denotes | ensure |
T15146 | 36-46 | NN | denotes | disruption |
T15147 | 47-49 | IN | denotes | of |
T15148 | 50-54 | NN | denotes | gene |
T15149 | 55-65 | NN | denotes | expression |
T15150 | 66-71 | IN | denotes | after |
T15151 | 72-80 | NN | denotes | deletion |
T15152 | 81-83 | IN | denotes | of |
T15153 | 84-87 | DT | denotes | the |
T15154 | 88-92 | NN | denotes | NeoR |
T15155 | 93-102 | NN | denotes | sequence. |
T15156 | 103-104 | -LRB- | denotes | ( |
T15157 | 104-105 | NN | denotes | B |
T15158 | 105-106 | -RRB- | denotes | ) |
T15159 | 107-116 | NN | denotes | Anti-HOIP |
T15160 | 117-120 | CC | denotes | and |
T15161 | 121-130 | JJ | denotes | anti-FLAG |
T15162 | 131-138 | JJ | denotes | Western |
T15163 | 139-144 | NN | denotes | blots |
T15164 | 145-147 | IN | denotes | of |
T15165 | 148-152 | NN | denotes | cell |
T15166 | 153-160 | NN | denotes | lysates |
T15167 | 161-165 | IN | denotes | from |
T15168 | 166-172 | NN | denotes | A20.2J |
T15169 | 173-178 | NN | denotes | cells |
T15170 | 179-182 | CC | denotes | and |
T15171 | 183-197 | JJ | denotes | HOIP-deficient |
T15172 | 198-199 | -LRB- | denotes | ( |
T15173 | 199-206 | JJ | denotes | HOIP-/- |
T15174 | 206-207 | -RRB- | denotes | ) |
T15175 | 208-214 | NN | denotes | clones |
R12032 | T15142 | T15140 | arg1Of | sequence,The |
R12033 | T15142 | T15141 | arg1Of | sequence,SV40pA |
R12034 | T15142 | T15143 | arg1Of | sequence,helps |
R12035 | T15142 | T15145 | arg1Of | sequence,ensure |
R12036 | T15145 | T15143 | arg2Of | ensure,helps |
R12037 | T15145 | T15144 | arg1Of | ensure,to |
R12038 | T15146 | T15147 | arg1Of | disruption,of |
R12039 | T15146 | T15150 | arg1Of | disruption,after |
R12040 | T15146 | T15160 | arg1Of | disruption,and |
R12041 | T15149 | T15147 | arg2Of | expression,of |
R12042 | T15149 | T15148 | arg1Of | expression,gene |
R12043 | T15151 | T15150 | arg2Of | deletion,after |
R12044 | T15151 | T15152 | arg1Of | deletion,of |
R12045 | T15155 | T15154 | arg1Of | sequence.,NeoR |
R12046 | T15155 | T15156 | arg1Of | sequence.,( |
R12047 | T15157 | T15156 | arg2Of | B,( |
R12048 | T15158 | T15156 | arg3Of | ),( |
R12049 | T15159 | T15152 | arg2Of | Anti-HOIP,of |
R12050 | T15159 | T15153 | arg1Of | Anti-HOIP,the |
R12051 | T15159 | T15155 | arg1Of | Anti-HOIP,sequence. |
R12052 | T15160 | T15145 | arg2Of | and,ensure |
R12053 | T15163 | T15160 | arg2Of | blots,and |
R12054 | T15163 | T15161 | arg1Of | blots,anti-FLAG |
R12055 | T15163 | T15162 | arg1Of | blots,Western |
R12056 | T15163 | T15164 | arg1Of | blots,of |
R12057 | T15166 | T15165 | arg1Of | lysates,cell |
R12058 | T15166 | T15167 | arg1Of | lysates,from |
R12059 | T15166 | T15170 | arg1Of | lysates,and |
R12060 | T15169 | T15167 | arg2Of | cells,from |
R12061 | T15169 | T15168 | arg1Of | cells,A20.2J |
R12062 | T15170 | T15164 | arg2Of | and,of |
R12063 | T15171 | T15172 | arg1Of | HOIP-deficient,( |
R12064 | T15173 | T15172 | arg2Of | HOIP-/-,( |
R12065 | T15174 | T15172 | arg3Of | ),( |
R12066 | T15175 | T15170 | arg2Of | clones,and |
R12067 | T15175 | T15171 | arg1Of | clones,HOIP-deficient |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14926 | 0-3 | DT | denotes | The |
T14927 | 4-10 | NNP | denotes | SV40pA |
T14928 | 11-19 | NN | denotes | sequence |
T14929 | 20-25 | VBZ | denotes | helps |
T14930 | 26-28 | TO | denotes | to |
T14931 | 29-35 | VB | denotes | ensure |
T14932 | 36-46 | NN | denotes | disruption |
T14933 | 47-49 | IN | denotes | of |
T14934 | 50-54 | NN | denotes | gene |
T14935 | 55-65 | NN | denotes | expression |
T14936 | 66-71 | IN | denotes | after |
T14937 | 72-80 | NN | denotes | deletion |
T14938 | 81-83 | IN | denotes | of |
T14939 | 84-87 | DT | denotes | the |
T14940 | 88-92 | NNP | denotes | NeoR |
T14941 | 93-101 | NN | denotes | sequence |
T14942 | 101-102 | . | denotes | . |
T14943 | 103-104 | -LRB- | denotes | ( |
T14944 | 104-105 | NNP | denotes | B |
T14945 | 105-106 | -RRB- | denotes | ) |
T14946 | 107-116 | NNP | denotes | Anti-HOIP |
T14947 | 117-120 | CC | denotes | and |
T14948 | 121-130 | NNP | denotes | anti-FLAG |
T14949 | 131-138 | NNP | denotes | Western |
T14950 | 139-144 | NNS | denotes | blots |
T14951 | 145-147 | IN | denotes | of |
T14952 | 148-152 | NN | denotes | cell |
T14953 | 153-160 | NNS | denotes | lysates |
T14954 | 161-165 | IN | denotes | from |
T14955 | 166-169 | NNP | denotes | A20 |
T14956 | 169-171 | CD | denotes | .2 |
T14957 | 171-172 | NNP | denotes | J |
T14958 | 173-178 | NNS | denotes | cells |
T14959 | 179-182 | CC | denotes | and |
T14960 | 183-197 | JJ | denotes | HOIP-deficient |
T14961 | 198-199 | -LRB- | denotes | ( |
T14962 | 199-203 | SYM | denotes | HOIP |
T14963 | 203-204 | : | denotes | - |
T14964 | 204-205 | SYM | denotes | / |
T14965 | 205-206 | : | denotes | - |
T14966 | 206-207 | -RRB- | denotes | ) |
T14967 | 208-214 | NNS | denotes | clones |
T14968 | 214-215 | . | denotes | . |
R11822 | T14926 | T14928 | det | The,sequence |
R11823 | T14927 | T14928 | compound | SV40pA,sequence |
R11824 | T14928 | T14929 | nsubj | sequence,helps |
R11825 | T14929 | T14929 | ROOT | helps,helps |
R11826 | T14930 | T14931 | aux | to,ensure |
R11827 | T14931 | T14929 | xcomp | ensure,helps |
R11828 | T14932 | T14931 | dobj | disruption,ensure |
R11829 | T14933 | T14932 | prep | of,disruption |
R11830 | T14934 | T14935 | compound | gene,expression |
R11831 | T14935 | T14933 | pobj | expression,of |
R11832 | T14936 | T14931 | prep | after,ensure |
R11833 | T14937 | T14936 | pobj | deletion,after |
R11834 | T14938 | T14937 | prep | of,deletion |
R11835 | T14939 | T14941 | det | the,sequence |
R11836 | T14940 | T14941 | compound | NeoR,sequence |
R11837 | T14941 | T14938 | pobj | sequence,of |
R11838 | T14942 | T14929 | punct | .,helps |
R11839 | T14943 | T14946 | punct | (,Anti-HOIP |
R11840 | T14944 | T14946 | nmod | B,Anti-HOIP |
R11841 | T14945 | T14946 | punct | ),Anti-HOIP |
R11842 | T14946 | T14950 | nmod | Anti-HOIP,blots |
R11843 | T14947 | T14946 | cc | and,Anti-HOIP |
R11844 | T14948 | T14949 | compound | anti-FLAG,Western |
R11845 | T14949 | T14946 | conj | Western,Anti-HOIP |
R11846 | T14950 | T14950 | ROOT | blots,blots |
R11847 | T14951 | T14950 | prep | of,blots |
R11848 | T14952 | T14953 | compound | cell,lysates |
R11849 | T14953 | T14951 | pobj | lysates,of |
R11850 | T14954 | T14950 | prep | from,blots |
R11851 | T14955 | T14958 | compound | A20,cells |
R11852 | T14956 | T14957 | compound | .2,J |
R11853 | T14957 | T14958 | compound | J,cells |
R11854 | T14958 | T14954 | pobj | cells,from |
R11855 | T14959 | T14958 | cc | and,cells |
R11856 | T14960 | T14958 | conj | HOIP-deficient,cells |
R11857 | T14961 | T14967 | punct | (,clones |
R11858 | T14962 | T14967 | dep | HOIP,clones |
R11859 | T14963 | T14967 | punct | -,clones |
R11860 | T14964 | T14967 | amod | /,clones |
R11861 | T14965 | T14964 | punct | -,/ |
R11862 | T14966 | T14964 | punct | ),/ |
R11863 | T14967 | T14958 | conj | clones,cells |
R11864 | T14968 | T14950 | punct | .,blots |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15254 | 50-65 | http://purl.obolibrary.org/obo/GO_0010467 | denotes | gene expression |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15260 | 173-178 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14803 | 0-215 | Sentence | denotes | The SV40pA sequence helps to ensure disruption of gene expression after deletion of the NeoR sequence. (B) Anti-HOIP and anti-FLAG Western blots of cell lysates from A20.2J cells and HOIP-deficient (HOIP-/-) clones. |
T55 | 0-215 | Sentence | denotes | The SV40pA sequence helps to ensure disruption of gene expression after deletion of the NeoR sequence. (B) Anti-HOIP and anti-FLAG Western blots of cell lysates from A20.2J cells and HOIP-deficient (HOIP-/-) clones. |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15234 | 112-116 | Q96EP0 | denotes | HOIP |
T15235 | 166-169 | P21580 | denotes | A20 |
T15236 | 183-187 | Q96EP0 | denotes | HOIP |
T15237 | 199-203 | Q96EP0 | denotes | HOIP |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14765 | 183-187 | Protein | denotes | HOIP |
T14766 | 188-197 | Negative_regulation | denotes | deficient |
T14767 | 199-203 | Protein | denotes | HOIP |
R11690 | T14765 | T14766 | themeOf | HOIP,deficient |