PMC:3148254 / 6699-6882 JSONTXT

Annnotations TAB JSON ListView MergeView

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T2845","span":{"begin":0,"end":4},"obj":"Protein"},{"id":"T2846","span":{"begin":13,"end":23},"obj":"Gene_expression"}],"relations":[{"id":"R2116","pred":"themeOf","subj":"T2845","obj":"T2846"}],"attributes":[{"id":"M17","pred":"Negation","subj":"T2846","obj":"true"},{"id":"M18","pred":"Speculation","subj":"T2846","obj":"true"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"HOIP protein expression was undetectable in both cell lines, as determined by Western blot analysis of cell lysates (Fig. 1B), demonstrating that the targeting process was successful."}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T3976","span":{"begin":0,"end":12},"obj":"Protein"},{"id":"T3977","span":{"begin":13,"end":23},"obj":"Gene_expression"},{"id":"T3978","span":{"begin":28,"end":40},"obj":"Gene_expression"}],"relations":[{"id":"R3093","pred":"themeOf","subj":"T3976","obj":"T3977"},{"id":"R3096","pred":"themeOf","subj":"T3976","obj":"T3978"}],"text":"HOIP protein expression was undetectable in both cell lines, as determined by Western blot analysis of cell lysates (Fig. 1B), demonstrating that the targeting process was successful."}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T4016","span":{"begin":0,"end":4},"obj":"Protein"},{"id":"T4017","span":{"begin":13,"end":23},"obj":"Gene_expression"}],"relations":[{"id":"R3099","pred":"themeOf","subj":"T4016","obj":"T4017"}],"attributes":[{"id":"M23","pred":"Negation","subj":"T4017","obj":"true"},{"id":"M24","pred":"Speculation","subj":"T4017","obj":"true"}],"text":"HOIP protein expression was undetectable in both cell lines, as determined by Western blot analysis of cell lysates (Fig. 1B), demonstrating that the targeting process was successful."}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T3643","span":{"begin":0,"end":4},"obj":"NN"},{"id":"T3644","span":{"begin":5,"end":12},"obj":"NN"},{"id":"T3645","span":{"begin":13,"end":23},"obj":"NN"},{"id":"T3646","span":{"begin":24,"end":27},"obj":"VB"},{"id":"T3647","span":{"begin":28,"end":40},"obj":"JJ"},{"id":"T3648","span":{"begin":41,"end":43},"obj":"IN"},{"id":"T3649","span":{"begin":44,"end":48},"obj":"DT"},{"id":"T3650","span":{"begin":49,"end":53},"obj":"NN"},{"id":"T3651","span":{"begin":54,"end":59},"obj":"NN"},{"id":"T3652","span":{"begin":59,"end":60},"obj":"-COMMA-"},{"id":"T3653","span":{"begin":61,"end":63},"obj":"IN"},{"id":"T3654","span":{"begin":64,"end":74},"obj":"VB"},{"id":"T3655","span":{"begin":75,"end":77},"obj":"IN"},{"id":"T3656","span":{"begin":78,"end":85},"obj":"JJ"},{"id":"T3657","span":{"begin":86,"end":90},"obj":"NN"},{"id":"T3658","span":{"begin":91,"end":99},"obj":"NN"},{"id":"T3659","span":{"begin":100,"end":102},"obj":"IN"},{"id":"T3660","span":{"begin":103,"end":107},"obj":"NN"},{"id":"T3661","span":{"begin":108,"end":115},"obj":"NN"},{"id":"T3662","span":{"begin":116,"end":117},"obj":"-LRB-"},{"id":"T3663","span":{"begin":117,"end":121},"obj":"NNP"},{"id":"T3664","span":{"begin":122,"end":124},"obj":"NN"},{"id":"T3665","span":{"begin":124,"end":125},"obj":"-RRB-"},{"id":"T3666","span":{"begin":125,"end":126},"obj":"-COMMA-"},{"id":"T3667","span":{"begin":127,"end":140},"obj":"VB"},{"id":"T3668","span":{"begin":141,"end":145},"obj":"IN"},{"id":"T3669","span":{"begin":146,"end":149},"obj":"DT"},{"id":"T3670","span":{"begin":150,"end":159},"obj":"VB"},{"id":"T3671","span":{"begin":160,"end":167},"obj":"NN"},{"id":"T3672","span":{"begin":168,"end":171},"obj":"VB"},{"id":"T3673","span":{"begin":172,"end":182},"obj":"JJ"}],"relations":[{"id":"R2893","pred":"arg1Of","subj":"T3645","obj":"T3643"},{"id":"R2894","pred":"arg1Of","subj":"T3645","obj":"T3644"},{"id":"R2895","pred":"arg1Of","subj":"T3645","obj":"T3646"},{"id":"R2896","pred":"arg1Of","subj":"T3645","obj":"T3647"},{"id":"R2897","pred":"arg1Of","subj":"T3646","obj":"T3652"},{"id":"R2898","pred":"arg1Of","subj":"T3646","obj":"T3653"},{"id":"R2899","pred":"arg1Of","subj":"T3646","obj":"T3666"},{"id":"R2900","pred":"modOf","subj":"T3646","obj":"T3667"},{"id":"R2901","pred":"arg2Of","subj":"T3647","obj":"T3646"},{"id":"R2902","pred":"arg1Of","subj":"T3647","obj":"T3648"},{"id":"R2903","pred":"arg2Of","subj":"T3651","obj":"T3648"},{"id":"R2904","pred":"arg1Of","subj":"T3651","obj":"T3649"},{"id":"R2905","pred":"arg1Of","subj":"T3651","obj":"T3650"},{"id":"R2906","pred":"arg2Of","subj":"T3654","obj":"T3653"},{"id":"R2907","pred":"arg1Of","subj":"T3658","obj":"T3654"},{"id":"R2908","pred":"arg2Of","subj":"T3658","obj":"T3655"},{"id":"R2909","pred":"arg1Of","subj":"T3658","obj":"T3656"},{"id":"R2910","pred":"arg1Of","subj":"T3658","obj":"T3657"},{"id":"R2911","pred":"arg1Of","subj":"T3658","obj":"T3659"},{"id":"R2912","pred":"arg2Of","subj":"T3661","obj":"T3659"},{"id":"R2913","pred":"arg1Of","subj":"T3661","obj":"T3660"},{"id":"R2914","pred":"arg1Of","subj":"T3661","obj":"T3662"},{"id":"R2915","pred":"arg2Of","subj":"T3664","obj":"T3662"},{"id":"R2916","pred":"arg1Of","subj":"T3664","obj":"T3663"},{"id":"R2917","pred":"arg3Of","subj":"T3665","obj":"T3662"},{"id":"R2918","pred":"arg1Of","subj":"T3669","obj":"T3670"},{"id":"R2919","pred":"arg1Of","subj":"T3670","obj":"T3669"},{"id":"R2920","pred":"arg1Of","subj":"T3670","obj":"T3672"},{"id":"R2921","pred":"arg1Of","subj":"T3670","obj":"T3673"},{"id":"R2922","pred":"arg2Of","subj":"T3671","obj":"T3670"},{"id":"R2923","pred":"arg2Of","subj":"T3672","obj":"T3667"},{"id":"R2924","pred":"arg1Of","subj":"T3672","obj":"T3668"},{"id":"R2925","pred":"arg2Of","subj":"T3673","obj":"T3672"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"HOIP protein expression was undetectable in both cell lines, as determined by Western blot analysis of cell lysates (Fig. 1B), demonstrating that the targeting process was successful."}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T3195","span":{"begin":0,"end":4},"obj":"NNP"},{"id":"T3196","span":{"begin":5,"end":12},"obj":"NN"},{"id":"T3197","span":{"begin":13,"end":23},"obj":"NN"},{"id":"T3198","span":{"begin":24,"end":27},"obj":"VBD"},{"id":"T3199","span":{"begin":28,"end":40},"obj":"JJ"},{"id":"T3200","span":{"begin":41,"end":43},"obj":"IN"},{"id":"T3201","span":{"begin":44,"end":48},"obj":"DT"},{"id":"T3202","span":{"begin":49,"end":53},"obj":"NN"},{"id":"T3203","span":{"begin":54,"end":59},"obj":"NNS"},{"id":"T3204","span":{"begin":59,"end":60},"obj":","},{"id":"T3205","span":{"begin":61,"end":63},"obj":"IN"},{"id":"T3206","span":{"begin":64,"end":74},"obj":"VBN"},{"id":"T3207","span":{"begin":75,"end":77},"obj":"IN"},{"id":"T3208","span":{"begin":78,"end":85},"obj":"JJ"},{"id":"T3209","span":{"begin":86,"end":90},"obj":"NN"},{"id":"T3210","span":{"begin":91,"end":99},"obj":"NN"},{"id":"T3211","span":{"begin":100,"end":102},"obj":"IN"},{"id":"T3212","span":{"begin":103,"end":107},"obj":"NN"},{"id":"T3213","span":{"begin":108,"end":115},"obj":"NNS"},{"id":"T3214","span":{"begin":116,"end":117},"obj":"-LRB-"},{"id":"T3215","span":{"begin":117,"end":121},"obj":"NNP"},{"id":"T3216","span":{"begin":122,"end":124},"obj":"NNP"},{"id":"T3217","span":{"begin":124,"end":125},"obj":"-RRB-"},{"id":"T3218","span":{"begin":125,"end":126},"obj":","},{"id":"T3219","span":{"begin":127,"end":140},"obj":"VBG"},{"id":"T3220","span":{"begin":141,"end":145},"obj":"IN"},{"id":"T3221","span":{"begin":146,"end":149},"obj":"DT"},{"id":"T3222","span":{"begin":150,"end":159},"obj":"VBG"},{"id":"T3223","span":{"begin":160,"end":167},"obj":"NN"},{"id":"T3224","span":{"begin":168,"end":171},"obj":"VBD"},{"id":"T3225","span":{"begin":172,"end":182},"obj":"JJ"},{"id":"T3226","span":{"begin":182,"end":183},"obj":"."}],"relations":[{"id":"R2440","pred":"compound","subj":"T3195","obj":"T3197"},{"id":"R2441","pred":"compound","subj":"T3196","obj":"T3197"},{"id":"R2442","pred":"nsubj","subj":"T3197","obj":"T3198"},{"id":"R2443","pred":"ROOT","subj":"T3198","obj":"T3198"},{"id":"R2444","pred":"acomp","subj":"T3199","obj":"T3198"},{"id":"R2445","pred":"prep","subj":"T3200","obj":"T3199"},{"id":"R2446","pred":"det","subj":"T3201","obj":"T3203"},{"id":"R2447","pred":"compound","subj":"T3202","obj":"T3203"},{"id":"R2448","pred":"pobj","subj":"T3203","obj":"T3200"},{"id":"R2449","pred":"punct","subj":"T3204","obj":"T3198"},{"id":"R2450","pred":"mark","subj":"T3205","obj":"T3206"},{"id":"R2451","pred":"advcl","subj":"T3206","obj":"T3198"},{"id":"R2452","pred":"agent","subj":"T3207","obj":"T3206"},{"id":"R2453","pred":"amod","subj":"T3208","obj":"T3210"},{"id":"R2454","pred":"compound","subj":"T3209","obj":"T3210"},{"id":"R2455","pred":"pobj","subj":"T3210","obj":"T3207"},{"id":"R2456","pred":"prep","subj":"T3211","obj":"T3210"},{"id":"R2457","pred":"compound","subj":"T3212","obj":"T3213"},{"id":"R2458","pred":"pobj","subj":"T3213","obj":"T3211"},{"id":"R2459","pred":"punct","subj":"T3214","obj":"T3210"},{"id":"R2460","pred":"compound","subj":"T3215","obj":"T3216"},{"id":"R2461","pred":"appos","subj":"T3216","obj":"T3210"},{"id":"R2462","pred":"punct","subj":"T3217","obj":"T3210"},{"id":"R2463","pred":"punct","subj":"T3218","obj":"T3198"},{"id":"R2464","pred":"advcl","subj":"T3219","obj":"T3198"},{"id":"R2465","pred":"mark","subj":"T3220","obj":"T3224"},{"id":"R2466","pred":"det","subj":"T3221","obj":"T3223"},{"id":"R2467","pred":"compound","subj":"T3222","obj":"T3223"},{"id":"R2468","pred":"nsubj","subj":"T3223","obj":"T3224"},{"id":"R2469","pred":"ccomp","subj":"T3224","obj":"T3219"},{"id":"R2470","pred":"acomp","subj":"T3225","obj":"T3224"},{"id":"R2471","pred":"punct","subj":"T3226","obj":"T3198"}],"text":"HOIP protein expression was undetectable in both cell lines, as determined by Western blot analysis of cell lysates (Fig. 1B), demonstrating that the targeting process was successful."}

    sentences

    {"project":"sentences","denotations":[{"id":"T2875","span":{"begin":0,"end":183},"obj":"Sentence"},{"id":"T47","span":{"begin":0,"end":183},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"HOIP protein expression was undetectable in both cell lines, as determined by Western blot analysis of cell lysates (Fig. 1B), demonstrating that the targeting process was successful."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T3808","span":{"begin":0,"end":4},"obj":"Q96EP0"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"HOIP protein expression was undetectable in both cell lines, as determined by Western blot analysis of cell lysates (Fig. 1B), demonstrating that the targeting process was successful."}

    test2

    {"project":"test2","denotations":[{"id":"T2795","span":{"begin":0,"end":4},"obj":"Protein"},{"id":"T2796","span":{"begin":13,"end":23},"obj":"Gene_expression"}],"relations":[{"id":"R2093","pred":"themeOf","subj":"T2795","obj":"T2796"}],"text":"HOIP protein expression was undetectable in both cell lines, as determined by Western blot analysis of cell lysates (Fig. 1B), demonstrating that the targeting process was successful."}