PMC:3148254 / 492-683
Annnotations
bionlp-st-ge-2016-reference
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T90 | 38-42 | Protein | denotes | CD40 |
| T91 | 43-53 | Binding | denotes | engagement |
| R41 | T90 | T91 | themeOf | CD40,engagement |
bionlp-st-ge-2016-reference-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T898 | 38-42 | Protein | denotes | CD40 |
| T899 | 140-145 | Protein | denotes | NF-κB |
| T900 | 147-179 | Protein | denotes | stress-activated protein kinases |
| T901 | 43-53 | Binding | denotes | engagement |
| T902 | 126-136 | Positive_regulation | denotes | activation |
| T903 | 126-136 | Positive_regulation | denotes | activation |
| R654 | T898 | T901 | themeOf | CD40,engagement |
| R655 | T899 | T902 | themeOf | NF-κB,activation |
| R656 | T900 | T903 | themeOf | stress-activated protein kinases,activation |
events-check-again
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T950 | 38-42 | Protein | denotes | CD40 |
| T951 | 43-53 | Binding | denotes | engagement |
| R683 | T950 | T951 | themeOf | CD40,engagement |
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T494 | 5-6 | -COMMA- | denotes | , |
| T495 | 7-10 | CC | denotes | and |
| T496 | 11-17 | NN | denotes | memory |
| T497 | 18-19 | NN | denotes | B |
| T498 | 20-24 | NN | denotes | cell |
| T499 | 25-36 | NN | denotes | development |
| T500 | 38-42 | NN | denotes | CD40 |
| T501 | 43-53 | NN | denotes | engagement |
| T502 | 54-61 | VB | denotes | results |
| T503 | 62-64 | IN | denotes | in |
| T504 | 65-68 | DT | denotes | the |
| T505 | 69-78 | NN | denotes | formation |
| T506 | 79-81 | IN | denotes | of |
| T507 | 82-83 | DT | denotes | a |
| T508 | 84-103 | JJ | denotes | receptor-associated |
| T509 | 104-111 | NN | denotes | complex |
| T510 | 112-116 | WDT | denotes | that |
| T511 | 117-125 | VB | denotes | mediates |
| T512 | 126-136 | NN | denotes | activation |
| T513 | 137-139 | IN | denotes | of |
| T514 | 140-145 | NN | denotes | NF-κB |
| T515 | 145-146 | -COMMA- | denotes | , |
| T516 | 147-163 | JJ | denotes | stress-activated |
| T517 | 164-171 | NN | denotes | protein |
| T518 | 172-179 | NN | denotes | kinases |
| T519 | 179-180 | -COMMA- | denotes | , |
| T520 | 181-184 | CC | denotes | and |
| T521 | 185-190 | JJ | denotes | other |
| R415 | T495 | T494 | arg1Of | and,"," |
| R416 | T499 | T495 | arg2Of | development,and |
| R417 | T499 | T496 | arg1Of | development,memory |
| R418 | T499 | T497 | arg1Of | development,B |
| R419 | T499 | T498 | arg1Of | development,cell |
| R420 | T501 | T500 | arg1Of | engagement,CD40 |
| R421 | T501 | T502 | arg1Of | engagement,results |
| R422 | T502 | T503 | arg1Of | results,in |
| R423 | T505 | T503 | arg2Of | formation,in |
| R424 | T505 | T504 | arg1Of | formation,the |
| R425 | T505 | T506 | arg1Of | formation,of |
| R426 | T505 | T510 | arg1Of | formation,that |
| R427 | T505 | T511 | arg1Of | formation,mediates |
| R428 | T509 | T506 | arg2Of | complex,of |
| R429 | T509 | T507 | arg1Of | complex,a |
| R430 | T509 | T508 | arg1Of | complex,receptor-associated |
| R431 | T512 | T511 | arg2Of | activation,mediates |
| R432 | T512 | T513 | arg1Of | activation,of |
| R433 | T514 | T515 | arg1Of | NF-κB,"," |
| R434 | T515 | T520 | arg1Of | ",",and |
| R435 | T518 | T515 | arg2Of | kinases,"," |
| R436 | T518 | T516 | arg1Of | kinases,stress-activated |
| R437 | T518 | T517 | arg1Of | kinases,protein |
| R438 | T520 | T513 | arg2Of | and,of |
| R439 | T520 | T519 | arg1Of | and,"," |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T206 | 5-6 | , | denotes | , |
| T207 | 7-10 | CC | denotes | and |
| T208 | 11-17 | NN | denotes | memory |
| T209 | 18-19 | NNP | denotes | B |
| T210 | 20-24 | NN | denotes | cell |
| T211 | 25-36 | NN | denotes | development |
| T212 | 36-37 | . | denotes | . |
| T213 | 38-42 | CD | denotes | CD40 |
| T214 | 43-53 | NN | denotes | engagement |
| T215 | 54-61 | NNS | denotes | results |
| T216 | 62-64 | IN | denotes | in |
| T217 | 65-68 | DT | denotes | the |
| T218 | 69-78 | NN | denotes | formation |
| T219 | 79-81 | IN | denotes | of |
| T220 | 82-83 | DT | denotes | a |
| T221 | 84-103 | JJ | denotes | receptor-associated |
| T222 | 104-111 | NN | denotes | complex |
| T223 | 112-116 | WDT | denotes | that |
| T224 | 117-125 | VBZ | denotes | mediates |
| T225 | 126-136 | NN | denotes | activation |
| T226 | 137-139 | IN | denotes | of |
| T227 | 140-145 | NNP | denotes | NF-κB |
| T228 | 145-146 | , | denotes | , |
| T229 | 147-163 | JJ | denotes | stress-activated |
| T230 | 164-171 | NN | denotes | protein |
| T231 | 172-179 | NNS | denotes | kinases |
| T232 | 179-180 | , | denotes | , |
| T233 | 181-184 | CC | denotes | and |
| T234 | 185-190 | JJ | denotes | other |
| R130 | T208 | T209 | compound | memory,B |
| R131 | T209 | T211 | compound | B,development |
| R132 | T210 | T211 | compound | cell,development |
| R135 | T213 | T215 | nummod | CD40,results |
| R136 | T214 | T215 | compound | engagement,results |
| R137 | T215 | T215 | ROOT | results,results |
| R138 | T216 | T215 | prep | in,results |
| R139 | T217 | T218 | det | the,formation |
| R140 | T218 | T216 | pobj | formation,in |
| R141 | T219 | T218 | prep | of,formation |
| R142 | T220 | T222 | det | a,complex |
| R143 | T221 | T222 | amod | receptor-associated,complex |
| R144 | T222 | T219 | pobj | complex,of |
| R145 | T223 | T224 | nsubj | that,mediates |
| R146 | T224 | T222 | relcl | mediates,complex |
| R147 | T225 | T224 | dobj | activation,mediates |
| R148 | T226 | T225 | prep | of,activation |
| R149 | T227 | T226 | pobj | NF-κB,of |
| R150 | T228 | T227 | punct | ",",NF-κB |
| R151 | T229 | T231 | amod | stress-activated,kinases |
| R152 | T230 | T231 | compound | protein,kinases |
| R153 | T231 | T225 | conj | kinases,activation |
| R154 | T232 | T231 | punct | ",",kinases |
| R155 | T233 | T231 | cc | and,kinases |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T774 | 11-17 | http://purl.obolibrary.org/obo/GO_0007613 | denotes | memory |
| T775 | 20-36 | http://purl.obolibrary.org/obo/GO_0048468 | denotes | cell development |
| T776 | 25-36 | http://purl.obolibrary.org/obo/GO_0032502 | denotes | development |
| T777 | 69-78 | http://purl.obolibrary.org/obo/GO_0009058 | denotes | formation |
| T778 | 69-92 | http://purl.obolibrary.org/obo/GO_0032800 | denotes | formation of a receptor |
| T779 | 126-145 | http://purl.obolibrary.org/obo/GO_0051092 | denotes | activation of NF-κB |
| T782 | 154-179 | http://purl.obolibrary.org/obo/GO_0034199 | denotes | activated protein kinases |
| T783 | 154-179 | http://purl.obolibrary.org/obo/GO_0032147 | denotes | activated protein kinases |
| T784 | 154-179 | http://purl.obolibrary.org/obo/GO_0030295 | denotes | activated protein kinases |
| T785 | 154-179 | http://purl.obolibrary.org/obo/GO_0032111 | denotes | activated protein kinases |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T797 | 154-179 | http://purl.obolibrary.org/obo/GO_0030295 | denotes | activated protein kinases |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T801 | 20-24 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T809 | 104-125 | http://purl.obolibrary.org/obo/GO_0016592 | denotes | complex that mediates |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T709 | 38-42 | P25942 | denotes | CD40 |
| T710 | 147-179 | P53778 | denotes | stress-activated protein kinases |
| T711 | 147-179 | O15264 | denotes | stress-activated protein kinases |
test2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T50 | 38-42 | Protein | denotes | CD40 |
| T51 | 43-53 | Binding | denotes | engagement |
| R23 | T50 | T51 | themeOf | CD40,engagement |