PMC:3148254 / 401-598 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/3148254","sourcedb":"PMC","sourceid":"3148254","source_url":"http://www.ncbi.nlm.nih.gov/pmc/3148254","text":"n B cells, CD40 signaling has a major role in regulating cell proliferation, antibody production, and memory B cell development. CD40 engagement results in the formation of a receptor-associated co","tracks":[{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T89","span":{"begin":11,"end":15},"obj":"Protein"},{"id":"T90","span":{"begin":129,"end":133},"obj":"Protein"},{"id":"T91","span":{"begin":134,"end":144},"obj":"Binding"}],"relations":[{"id":"R41","pred":"themeOf","subj":"T90","obj":"T91"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"attributes":[{"subj":"T89","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T90","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T91","pred":"source","obj":"bionlp-st-ge-2016-reference"}]},{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T897","span":{"begin":11,"end":15},"obj":"Protein"},{"id":"T898","span":{"begin":129,"end":133},"obj":"Protein"},{"id":"T901","span":{"begin":134,"end":144},"obj":"Binding"}],"relations":[{"id":"R654","pred":"themeOf","subj":"T898","obj":"T901"}],"attributes":[{"subj":"T897","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T898","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T901","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"}]},{"project":"events-check-again","denotations":[{"id":"T949","span":{"begin":11,"end":15},"obj":"Protein"},{"id":"T950","span":{"begin":129,"end":133},"obj":"Protein"},{"id":"T951","span":{"begin":134,"end":144},"obj":"Binding"}],"relations":[{"id":"R683","pred":"themeOf","subj":"T950","obj":"T951"}],"attributes":[{"subj":"T949","pred":"source","obj":"events-check-again"},{"subj":"T950","pred":"source","obj":"events-check-again"},{"subj":"T951","pred":"source","obj":"events-check-again"}]},{"project":"pmc-enju-pas","denotations":[{"id":"T478","span":{"begin":2,"end":3},"obj":"NN"},{"id":"T479","span":{"begin":4,"end":9},"obj":"NN"},{"id":"T480","span":{"begin":9,"end":10},"obj":"-COMMA-"},{"id":"T481","span":{"begin":11,"end":15},"obj":"NN"},{"id":"T482","span":{"begin":16,"end":25},"obj":"NN"},{"id":"T483","span":{"begin":26,"end":29},"obj":"VB"},{"id":"T484","span":{"begin":30,"end":31},"obj":"DT"},{"id":"T485","span":{"begin":32,"end":37},"obj":"JJ"},{"id":"T486","span":{"begin":38,"end":42},"obj":"NN"},{"id":"T487","span":{"begin":43,"end":45},"obj":"IN"},{"id":"T488","span":{"begin":46,"end":56},"obj":"VB"},{"id":"T489","span":{"begin":57,"end":61},"obj":"NN"},{"id":"T490","span":{"begin":62,"end":75},"obj":"NN"},{"id":"T491","span":{"begin":75,"end":76},"obj":"-COMMA-"},{"id":"T492","span":{"begin":77,"end":85},"obj":"NN"},{"id":"T493","span":{"begin":86,"end":96},"obj":"NN"},{"id":"T494","span":{"begin":96,"end":97},"obj":"-COMMA-"},{"id":"T495","span":{"begin":98,"end":101},"obj":"CC"},{"id":"T496","span":{"begin":102,"end":108},"obj":"NN"},{"id":"T497","span":{"begin":109,"end":110},"obj":"NN"},{"id":"T498","span":{"begin":111,"end":115},"obj":"NN"},{"id":"T499","span":{"begin":116,"end":127},"obj":"NN"},{"id":"T500","span":{"begin":129,"end":133},"obj":"NN"},{"id":"T501","span":{"begin":134,"end":144},"obj":"NN"},{"id":"T502","span":{"begin":145,"end":152},"obj":"VB"},{"id":"T503","span":{"begin":153,"end":155},"obj":"IN"},{"id":"T504","span":{"begin":156,"end":159},"obj":"DT"},{"id":"T505","span":{"begin":160,"end":169},"obj":"NN"},{"id":"T506","span":{"begin":170,"end":172},"obj":"IN"},{"id":"T507","span":{"begin":173,"end":174},"obj":"DT"},{"id":"T508","span":{"begin":175,"end":194},"obj":"JJ"}],"relations":[{"id":"R399","pred":"arg1Of","subj":"T479","obj":"T478"},{"id":"R400","pred":"arg1Of","subj":"T482","obj":"T481"},{"id":"R401","pred":"arg1Of","subj":"T482","obj":"T483"},{"id":"R403","pred":"arg1Of","subj":"T483","obj":"T480"},{"id":"R404","pred":"arg2Of","subj":"T486","obj":"T483"},{"id":"R405","pred":"arg1Of","subj":"T486","obj":"T484"},{"id":"R406","pred":"arg1Of","subj":"T486","obj":"T485"},{"id":"R407","pred":"arg1Of","subj":"T486","obj":"T487"},{"id":"R408","pred":"arg2Of","subj":"T488","obj":"T487"},{"id":"R409","pred":"arg1Of","subj":"T490","obj":"T489"},{"id":"R410","pred":"arg1Of","subj":"T490","obj":"T491"},{"id":"R411","pred":"arg1Of","subj":"T491","obj":"T495"},{"id":"R412","pred":"arg2Of","subj":"T493","obj":"T491"},{"id":"R413","pred":"arg1Of","subj":"T493","obj":"T492"},{"id":"R414","pred":"arg2Of","subj":"T495","obj":"T488"},{"id":"R415","pred":"arg1Of","subj":"T495","obj":"T494"},{"id":"R416","pred":"arg2Of","subj":"T499","obj":"T495"},{"id":"R417","pred":"arg1Of","subj":"T499","obj":"T496"},{"id":"R418","pred":"arg1Of","subj":"T499","obj":"T497"},{"id":"R419","pred":"arg1Of","subj":"T499","obj":"T498"},{"id":"R420","pred":"arg1Of","subj":"T501","obj":"T500"},{"id":"R421","pred":"arg1Of","subj":"T501","obj":"T502"},{"id":"R422","pred":"arg1Of","subj":"T502","obj":"T503"},{"id":"R423","pred":"arg2Of","subj":"T505","obj":"T503"},{"id":"R424","pred":"arg1Of","subj":"T505","obj":"T504"},{"id":"R425","pred":"arg1Of","subj":"T505","obj":"T506"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T478","pred":"source","obj":"pmc-enju-pas"},{"subj":"T479","pred":"source","obj":"pmc-enju-pas"},{"subj":"T480","pred":"source","obj":"pmc-enju-pas"},{"subj":"T481","pred":"source","obj":"pmc-enju-pas"},{"subj":"T482","pred":"source","obj":"pmc-enju-pas"},{"subj":"T483","pred":"source","obj":"pmc-enju-pas"},{"subj":"T484","pred":"source","obj":"pmc-enju-pas"},{"subj":"T485","pred":"source","obj":"pmc-enju-pas"},{"subj":"T486","pred":"source","obj":"pmc-enju-pas"},{"subj":"T487","pred":"source","obj":"pmc-enju-pas"},{"subj":"T488","pred":"source","obj":"pmc-enju-pas"},{"subj":"T489","pred":"source","obj":"pmc-enju-pas"},{"subj":"T490","pred":"source","obj":"pmc-enju-pas"},{"subj":"T491","pred":"source","obj":"pmc-enju-pas"},{"subj":"T492","pred":"source","obj":"pmc-enju-pas"},{"subj":"T493","pred":"source","obj":"pmc-enju-pas"},{"subj":"T494","pred":"source","obj":"pmc-enju-pas"},{"subj":"T495","pred":"source","obj":"pmc-enju-pas"},{"subj":"T496","pred":"source","obj":"pmc-enju-pas"},{"subj":"T497","pred":"source","obj":"pmc-enju-pas"},{"subj":"T498","pred":"source","obj":"pmc-enju-pas"},{"subj":"T499","pred":"source","obj":"pmc-enju-pas"},{"subj":"T500","pred":"source","obj":"pmc-enju-pas"},{"subj":"T501","pred":"source","obj":"pmc-enju-pas"},{"subj":"T502","pred":"source","obj":"pmc-enju-pas"},{"subj":"T503","pred":"source","obj":"pmc-enju-pas"},{"subj":"T504","pred":"source","obj":"pmc-enju-pas"},{"subj":"T505","pred":"source","obj":"pmc-enju-pas"},{"subj":"T506","pred":"source","obj":"pmc-enju-pas"},{"subj":"T507","pred":"source","obj":"pmc-enju-pas"},{"subj":"T508","pred":"source","obj":"pmc-enju-pas"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T190","span":{"begin":2,"end":3},"obj":"NNP"},{"id":"T191","span":{"begin":4,"end":9},"obj":"NNS"},{"id":"T192","span":{"begin":9,"end":10},"obj":","},{"id":"T193","span":{"begin":11,"end":15},"obj":"NNP"},{"id":"T194","span":{"begin":16,"end":25},"obj":"VBG"},{"id":"T195","span":{"begin":26,"end":29},"obj":"VBZ"},{"id":"T196","span":{"begin":30,"end":31},"obj":"DT"},{"id":"T197","span":{"begin":32,"end":37},"obj":"JJ"},{"id":"T198","span":{"begin":38,"end":42},"obj":"NN"},{"id":"T199","span":{"begin":43,"end":45},"obj":"IN"},{"id":"T200","span":{"begin":46,"end":56},"obj":"VBG"},{"id":"T201","span":{"begin":57,"end":61},"obj":"NN"},{"id":"T202","span":{"begin":62,"end":75},"obj":"NN"},{"id":"T203","span":{"begin":75,"end":76},"obj":","},{"id":"T204","span":{"begin":77,"end":85},"obj":"NN"},{"id":"T205","span":{"begin":86,"end":96},"obj":"NN"},{"id":"T206","span":{"begin":96,"end":97},"obj":","},{"id":"T207","span":{"begin":98,"end":101},"obj":"CC"},{"id":"T208","span":{"begin":102,"end":108},"obj":"NN"},{"id":"T209","span":{"begin":109,"end":110},"obj":"NNP"},{"id":"T210","span":{"begin":111,"end":115},"obj":"NN"},{"id":"T211","span":{"begin":116,"end":127},"obj":"NN"},{"id":"T212","span":{"begin":127,"end":128},"obj":"."},{"id":"T213","span":{"begin":129,"end":133},"obj":"CD"},{"id":"T214","span":{"begin":134,"end":144},"obj":"NN"},{"id":"T215","span":{"begin":145,"end":152},"obj":"NNS"},{"id":"T216","span":{"begin":153,"end":155},"obj":"IN"},{"id":"T217","span":{"begin":156,"end":159},"obj":"DT"},{"id":"T218","span":{"begin":160,"end":169},"obj":"NN"},{"id":"T219","span":{"begin":170,"end":172},"obj":"IN"},{"id":"T220","span":{"begin":173,"end":174},"obj":"DT"},{"id":"T221","span":{"begin":175,"end":194},"obj":"JJ"}],"relations":[{"id":"R112","pred":"compound","subj":"T190","obj":"T191"},{"id":"R114","pred":"punct","subj":"T192","obj":"T195"},{"id":"R115","pred":"nsubj","subj":"T193","obj":"T194"},{"id":"R116","pred":"nsubj","subj":"T194","obj":"T195"},{"id":"R117","pred":"ROOT","subj":"T195","obj":"T195"},{"id":"R118","pred":"det","subj":"T196","obj":"T198"},{"id":"R119","pred":"amod","subj":"T197","obj":"T198"},{"id":"R120","pred":"dobj","subj":"T198","obj":"T195"},{"id":"R121","pred":"prep","subj":"T199","obj":"T198"},{"id":"R122","pred":"pcomp","subj":"T200","obj":"T199"},{"id":"R123","pred":"compound","subj":"T201","obj":"T202"},{"id":"R124","pred":"dobj","subj":"T202","obj":"T200"},{"id":"R125","pred":"punct","subj":"T203","obj":"T205"},{"id":"R126","pred":"compound","subj":"T204","obj":"T205"},{"id":"R127","pred":"conj","subj":"T205","obj":"T198"},{"id":"R128","pred":"punct","subj":"T206","obj":"T205"},{"id":"R129","pred":"cc","subj":"T207","obj":"T205"},{"id":"R130","pred":"compound","subj":"T208","obj":"T209"},{"id":"R131","pred":"compound","subj":"T209","obj":"T211"},{"id":"R132","pred":"compound","subj":"T210","obj":"T211"},{"id":"R133","pred":"conj","subj":"T211","obj":"T205"},{"id":"R134","pred":"punct","subj":"T212","obj":"T195"},{"id":"R135","pred":"nummod","subj":"T213","obj":"T215"},{"id":"R136","pred":"compound","subj":"T214","obj":"T215"},{"id":"R137","pred":"ROOT","subj":"T215","obj":"T215"},{"id":"R138","pred":"prep","subj":"T216","obj":"T215"},{"id":"R139","pred":"det","subj":"T217","obj":"T218"},{"id":"R140","pred":"pobj","subj":"T218","obj":"T216"},{"id":"R141","pred":"prep","subj":"T219","obj":"T218"}],"attributes":[{"subj":"T190","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T191","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T192","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T193","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T194","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T195","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T196","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T197","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T198","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T199","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T200","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T201","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T202","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T203","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T204","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T205","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T206","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T207","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T208","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T209","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T210","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T211","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T212","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T213","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T214","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T215","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T216","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T217","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T218","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T219","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T220","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T221","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"GO-BP","denotations":[{"id":"T757","span":{"begin":16,"end":25},"obj":"http://purl.obolibrary.org/obo/GO_0023052"},{"id":"T772","span":{"begin":57,"end":75},"obj":"http://purl.obolibrary.org/obo/GO_0008283"},{"id":"T773","span":{"begin":77,"end":96},"obj":"http://purl.obolibrary.org/obo/GO_0002377"},{"id":"T774","span":{"begin":102,"end":108},"obj":"http://purl.obolibrary.org/obo/GO_0007613"},{"id":"T775","span":{"begin":111,"end":127},"obj":"http://purl.obolibrary.org/obo/GO_0048468"},{"id":"T776","span":{"begin":116,"end":127},"obj":"http://purl.obolibrary.org/obo/GO_0032502"},{"id":"T777","span":{"begin":160,"end":169},"obj":"http://purl.obolibrary.org/obo/GO_0009058"},{"id":"T778","span":{"begin":160,"end":183},"obj":"http://purl.obolibrary.org/obo/GO_0032800"}],"attributes":[{"subj":"T757","pred":"source","obj":"GO-BP"},{"subj":"T772","pred":"source","obj":"GO-BP"},{"subj":"T773","pred":"source","obj":"GO-BP"},{"subj":"T774","pred":"source","obj":"GO-BP"},{"subj":"T775","pred":"source","obj":"GO-BP"},{"subj":"T776","pred":"source","obj":"GO-BP"},{"subj":"T777","pred":"source","obj":"GO-BP"},{"subj":"T778","pred":"source","obj":"GO-BP"}]},{"project":"GO-MF","denotations":[{"id":"T795","span":{"begin":77,"end":85},"obj":"http://purl.obolibrary.org/obo/GO_0003823"}],"attributes":[{"subj":"T795","pred":"source","obj":"GO-MF"}]},{"project":"GO-CC","denotations":[{"id":"T800","span":{"begin":57,"end":61},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T801","span":{"begin":111,"end":115},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T807","span":{"begin":77,"end":85},"obj":"http://purl.obolibrary.org/obo/GO_0019815"},{"id":"T808","span":{"begin":77,"end":85},"obj":"http://purl.obolibrary.org/obo/GO_0042571"}],"attributes":[{"subj":"T800","pred":"source","obj":"GO-CC"},{"subj":"T801","pred":"source","obj":"GO-CC"},{"subj":"T807","pred":"source","obj":"GO-CC"},{"subj":"T808","pred":"source","obj":"GO-CC"}]},{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T708","span":{"begin":11,"end":15},"obj":"P25942"},{"id":"T709","span":{"begin":129,"end":133},"obj":"P25942"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T708","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T709","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]},{"project":"test2","denotations":[{"id":"T49","span":{"begin":11,"end":15},"obj":"Protein"},{"id":"T50","span":{"begin":129,"end":133},"obj":"Protein"},{"id":"T51","span":{"begin":134,"end":144},"obj":"Binding"}],"relations":[{"id":"R23","pred":"themeOf","subj":"T50","obj":"T51"}],"attributes":[{"subj":"T49","pred":"source","obj":"test2"},{"subj":"T50","pred":"source","obj":"test2"},{"subj":"T51","pred":"source","obj":"test2"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"bionlp-st-ge-2016-reference","color":"#b193ec","default":true},{"id":"bionlp-st-ge-2016-reference-tees","color":"#93ec97"},{"id":"events-check-again","color":"#ec93a8"},{"id":"pmc-enju-pas","color":"#93c2ec"},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#dcec93"},{"id":"GO-BP","color":"#e193ec"},{"id":"GO-MF","color":"#93ecc7"},{"id":"GO-CC","color":"#ecad93"},{"id":"bionlp-st-ge-2016-uniprot","color":"#9393ec"},{"id":"test2","color":"#acec93"}]}]}}