PMC:3148254 / 276-441
Annnotations
bionlp-st-ge-2016-reference
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T86 | 2-6 | Protein | denotes | CD40 |
| T87 | 14-20 | Protein | denotes | ligand |
| T88 | 21-26 | Protein | denotes | CD154 |
| T89 | 136-140 | Protein | denotes | CD40 |
bionlp-st-ge-2016-reference-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T894 | 2-6 | Protein | denotes | CD40 |
| T895 | 21-26 | Protein | denotes | CD154 |
| T897 | 136-140 | Protein | denotes | CD40 |
events-check-again
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T946 | 2-6 | Protein | denotes | CD40 |
| T947 | 14-20 | Protein | denotes | ligand |
| T948 | 21-26 | Protein | denotes | CD154 |
| T949 | 136-140 | Protein | denotes | CD40 |
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T460 | 2-6 | NN | denotes | CD40 |
| T461 | 7-9 | IN | denotes | by |
| T462 | 10-13 | PRP-DOLLAR- | denotes | its |
| T463 | 14-20 | NN | denotes | ligand |
| T464 | 21-26 | NN | denotes | CD154 |
| T465 | 27-35 | VB | denotes | provides |
| T466 | 36-43 | NN | denotes | signals |
| T467 | 44-52 | JJ | denotes | critical |
| T468 | 53-56 | IN | denotes | for |
| T469 | 57-71 | JJ | denotes | anti-microbial |
| T470 | 72-75 | CC | denotes | and |
| T471 | 76-77 | NN | denotes | T |
| T472 | 78-91 | JJ | denotes | cell-mediated |
| T473 | 92-98 | JJ | denotes | immune |
| T474 | 99-108 | NN | denotes | responses |
| T475 | 108-109 | -COMMA- | denotes | , |
| T476 | 110-122 | RB | denotes | respectively |
| T477 | 124-126 | IN | denotes | In |
| T478 | 127-128 | NN | denotes | B |
| T479 | 129-134 | NN | denotes | cells |
| T480 | 134-135 | -COMMA- | denotes | , |
| T481 | 136-140 | NN | denotes | CD40 |
| T482 | 141-150 | NN | denotes | signaling |
| T483 | 151-154 | VB | denotes | has |
| T484 | 155-156 | DT | denotes | a |
| T485 | 157-162 | JJ | denotes | major |
| R381 | T464 | T461 | arg2Of | CD154,by |
| R382 | T464 | T462 | arg1Of | CD154,its |
| R383 | T464 | T463 | arg1Of | CD154,ligand |
| R386 | T465 | T475 | arg1Of | provides,"," |
| R387 | T465 | T476 | arg1Of | provides,respectively |
| R388 | T466 | T465 | arg2Of | signals,provides |
| R389 | T466 | T467 | arg1Of | signals,critical |
| R390 | T467 | T468 | arg1Of | critical,for |
| R391 | T469 | T470 | arg1Of | anti-microbial,and |
| R392 | T472 | T470 | arg2Of | cell-mediated,and |
| R393 | T472 | T471 | arg1Of | cell-mediated,T |
| R394 | T474 | T468 | arg2Of | responses,for |
| R395 | T474 | T469 | arg1Of | responses,anti-microbial |
| R396 | T474 | T472 | arg1Of | responses,cell-mediated |
| R397 | T474 | T473 | arg1Of | responses,immune |
| R398 | T479 | T477 | arg2Of | cells,In |
| R399 | T479 | T478 | arg1Of | cells,B |
| R400 | T482 | T481 | arg1Of | signaling,CD40 |
| R401 | T482 | T483 | arg1Of | signaling,has |
| R402 | T483 | T477 | arg1Of | has,In |
| R403 | T483 | T480 | arg1Of | has,"," |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T171 | 2-6 | CD | denotes | CD40 |
| T172 | 7-9 | IN | denotes | by |
| T173 | 10-13 | PRP$ | denotes | its |
| T174 | 14-20 | NN | denotes | ligand |
| T175 | 21-26 | NNP | denotes | CD154 |
| T176 | 27-35 | VBZ | denotes | provides |
| T177 | 36-43 | NNS | denotes | signals |
| T178 | 44-52 | JJ | denotes | critical |
| T179 | 53-56 | IN | denotes | for |
| T180 | 57-71 | JJ | denotes | anti-microbial |
| T181 | 72-75 | CC | denotes | and |
| T182 | 76-77 | NNP | denotes | T |
| T183 | 78-91 | JJ | denotes | cell-mediated |
| T184 | 92-98 | JJ | denotes | immune |
| T185 | 99-108 | NNS | denotes | responses |
| T186 | 108-109 | , | denotes | , |
| T187 | 110-122 | RB | denotes | respectively |
| T188 | 122-123 | . | denotes | . |
| T189 | 124-126 | IN | denotes | In |
| T190 | 127-128 | NNP | denotes | B |
| T191 | 129-134 | NNS | denotes | cells |
| T192 | 134-135 | , | denotes | , |
| T193 | 136-140 | NNP | denotes | CD40 |
| T194 | 141-150 | VBG | denotes | signaling |
| T195 | 151-154 | VBZ | denotes | has |
| T196 | 155-156 | DT | denotes | a |
| T197 | 157-162 | JJ | denotes | major |
| R95 | T173 | T175 | poss | its,CD154 |
| R96 | T174 | T175 | compound | ligand,CD154 |
| R97 | T175 | T172 | pobj | CD154,by |
| R98 | T176 | T176 | ROOT | provides,provides |
| R99 | T177 | T176 | dobj | signals,provides |
| R100 | T178 | T177 | amod | critical,signals |
| R101 | T179 | T178 | prep | for,critical |
| R102 | T180 | T179 | pobj | anti-microbial,for |
| R103 | T181 | T180 | cc | and,anti-microbial |
| R104 | T182 | T185 | nmod | T,responses |
| R105 | T183 | T185 | amod | cell-mediated,responses |
| R106 | T184 | T185 | amod | immune,responses |
| R107 | T185 | T180 | conj | responses,anti-microbial |
| R108 | T186 | T185 | punct | ",",responses |
| R109 | T187 | T185 | advmod | respectively,responses |
| R110 | T188 | T176 | punct | .,provides |
| R111 | T189 | T195 | prep | In,has |
| R112 | T190 | T191 | compound | B,cells |
| R113 | T191 | T189 | pobj | cells,In |
| R114 | T192 | T195 | punct | ",",has |
| R115 | T193 | T194 | nsubj | CD40,signaling |
| R116 | T194 | T195 | nsubj | signaling,has |
| R117 | T195 | T195 | ROOT | has,has |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T755 | 92-108 | http://purl.obolibrary.org/obo/GO_0006955 | denotes | immune responses |
| T756 | 36-43 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signals |
| T757 | 141-150 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signaling |
| T766 | 78-98 | http://purl.obolibrary.org/obo/GO_0002449 | denotes | cell-mediated immune |
| T767 | 78-98 | http://purl.obolibrary.org/obo/GO_0002456 | denotes | cell-mediated immune |
| T768 | 78-98 | http://purl.obolibrary.org/obo/GO_0019724 | denotes | cell-mediated immune |
| T769 | 78-98 | http://purl.obolibrary.org/obo/GO_0002228 | denotes | cell-mediated immune |
| T770 | 78-108 | http://purl.obolibrary.org/obo/GO_0002443 | denotes | cell-mediated immune responses |
| T771 | 78-98 | http://purl.obolibrary.org/obo/GO_0001909 | denotes | cell-mediated immune |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T794 | 14-20 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | ligand |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T799 | 78-82 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T706 | 2-6 | P25942 | denotes | CD40 |
| T707 | 21-26 | P29965 | denotes | CD154 |
| T708 | 136-140 | P25942 | denotes | CD40 |
test2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T46 | 2-6 | Protein | denotes | CD40 |
| T47 | 14-20 | Protein | denotes | ligand |
| T48 | 21-26 | Protein | denotes | CD154 |
| T49 | 136-140 | Protein | denotes | CD40 |