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PMC:3148254 / 235-491 JSONTXT

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bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T85 29-39 Binding denotes engagement
T86 43-47 Protein denotes CD40
T87 55-61 Protein denotes ligand
T88 62-67 Protein denotes CD154
T89 177-181 Protein denotes CD40
R39 T86 T85 themeOf CD40,engagement
R40 T88 T85 themeOf CD154,engagement

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T894 43-47 Protein denotes CD40
T895 62-67 Protein denotes CD154
T896 29-39 Binding denotes engagement
T897 177-181 Protein denotes CD40
R653 T894 T896 themeOf CD40,engagement

events-check-again

Id Subject Object Predicate Lexical cue
T945 29-39 Binding denotes engagement
T946 43-47 Protein denotes CD40
T947 55-61 Protein denotes ligand
T948 62-67 Protein denotes CD154
T949 177-181 Protein denotes CD40
R681 T946 T945 themeOf CD40,engagement
R682 T948 T945 themeOf CD154,engagement

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T454 8-11 CC denotes and
T455 12-21 JJ denotes dendritic
T456 22-27 NN denotes cells
T457 27-28 -COMMA- denotes ,
T458 29-39 NN denotes engagement
T459 40-42 IN denotes of
T460 43-47 NN denotes CD40
T461 48-50 IN denotes by
T462 51-54 PRP-DOLLAR- denotes its
T463 55-61 NN denotes ligand
T464 62-67 NN denotes CD154
T465 68-76 VB denotes provides
T466 77-84 NN denotes signals
T467 85-93 JJ denotes critical
T468 94-97 IN denotes for
T469 98-112 JJ denotes anti-microbial
T470 113-116 CC denotes and
T471 117-118 NN denotes T
T472 119-132 JJ denotes cell-mediated
T473 133-139 JJ denotes immune
T474 140-149 NN denotes responses
T475 149-150 -COMMA- denotes ,
T476 151-163 RB denotes respectively
T477 165-167 IN denotes In
T478 168-169 NN denotes B
T479 170-175 NN denotes cells
T480 175-176 -COMMA- denotes ,
T481 177-181 NN denotes CD40
T482 182-191 NN denotes signaling
T483 192-195 VB denotes has
T484 196-197 DT denotes a
T485 198-203 JJ denotes major
T486 204-208 NN denotes role
T487 209-211 IN denotes in
T488 212-222 VB denotes regulating
T489 223-227 NN denotes cell
T490 228-241 NN denotes proliferation
T491 241-242 -COMMA- denotes ,
T492 243-251 NN denotes antibody
R375 T456 T454 arg2Of cells,and
R376 T456 T455 arg1Of cells,dendritic
R377 T458 T459 arg1Of engagement,of
R378 T458 T461 arg1Of engagement,by
R379 T458 T465 arg1Of engagement,provides
R380 T460 T459 arg2Of CD40,of
R381 T464 T461 arg2Of CD154,by
R382 T464 T462 arg1Of CD154,its
R383 T464 T463 arg1Of CD154,ligand
R385 T465 T457 arg1Of provides,","
R386 T465 T475 arg1Of provides,","
R387 T465 T476 arg1Of provides,respectively
R388 T466 T465 arg2Of signals,provides
R389 T466 T467 arg1Of signals,critical
R390 T467 T468 arg1Of critical,for
R391 T469 T470 arg1Of anti-microbial,and
R392 T472 T470 arg2Of cell-mediated,and
R393 T472 T471 arg1Of cell-mediated,T
R394 T474 T468 arg2Of responses,for
R395 T474 T469 arg1Of responses,anti-microbial
R396 T474 T472 arg1Of responses,cell-mediated
R397 T474 T473 arg1Of responses,immune
R398 T479 T477 arg2Of cells,In
R399 T479 T478 arg1Of cells,B
R400 T482 T481 arg1Of signaling,CD40
R401 T482 T483 arg1Of signaling,has
R402 T483 T477 arg1Of has,In
R403 T483 T480 arg1Of has,","
R404 T486 T483 arg2Of role,has
R405 T486 T484 arg1Of role,a
R406 T486 T485 arg1Of role,major
R407 T486 T487 arg1Of role,in
R408 T488 T487 arg2Of regulating,in
R409 T490 T489 arg1Of proliferation,cell
R410 T490 T491 arg1Of proliferation,","

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T165 8-11 CC denotes and
T166 12-21 JJ denotes dendritic
T167 22-27 NNS denotes cells
T168 27-28 , denotes ,
T169 29-39 NN denotes engagement
T170 40-42 IN denotes of
T171 43-47 CD denotes CD40
T172 48-50 IN denotes by
T173 51-54 PRP$ denotes its
T174 55-61 NN denotes ligand
T175 62-67 NNP denotes CD154
T176 68-76 VBZ denotes provides
T177 77-84 NNS denotes signals
T178 85-93 JJ denotes critical
T179 94-97 IN denotes for
T180 98-112 JJ denotes anti-microbial
T181 113-116 CC denotes and
T182 117-118 NNP denotes T
T183 119-132 JJ denotes cell-mediated
T184 133-139 JJ denotes immune
T185 140-149 NNS denotes responses
T186 149-150 , denotes ,
T187 151-163 RB denotes respectively
T188 163-164 . denotes .
T189 165-167 IN denotes In
T190 168-169 NNP denotes B
T191 170-175 NNS denotes cells
T192 175-176 , denotes ,
T193 177-181 NNP denotes CD40
T194 182-191 VBG denotes signaling
T195 192-195 VBZ denotes has
T196 196-197 DT denotes a
T197 198-203 JJ denotes major
T198 204-208 NN denotes role
T199 209-211 IN denotes in
T200 212-222 VBG denotes regulating
T201 223-227 NN denotes cell
T202 228-241 NN denotes proliferation
T203 241-242 , denotes ,
T204 243-251 NN denotes antibody
R94 T172 T169 prep by,engagement
R95 T173 T175 poss its,CD154
R88 T166 T167 amod dendritic,cells
R90 T168 T167 punct ",",cells
R91 T169 T176 nsubj engagement,provides
R92 T170 T169 prep of,engagement
R93 T171 T170 pobj CD40,of
R96 T174 T175 compound ligand,CD154
R97 T175 T172 pobj CD154,by
R98 T176 T176 ROOT provides,provides
R99 T177 T176 dobj signals,provides
R100 T178 T177 amod critical,signals
R101 T179 T178 prep for,critical
R102 T180 T179 pobj anti-microbial,for
R103 T181 T180 cc and,anti-microbial
R104 T182 T185 nmod T,responses
R105 T183 T185 amod cell-mediated,responses
R106 T184 T185 amod immune,responses
R107 T185 T180 conj responses,anti-microbial
R108 T186 T185 punct ",",responses
R109 T187 T185 advmod respectively,responses
R110 T188 T176 punct .,provides
R111 T189 T195 prep In,has
R112 T190 T191 compound B,cells
R113 T191 T189 pobj cells,In
R114 T192 T195 punct ",",has
R115 T193 T194 nsubj CD40,signaling
R116 T194 T195 nsubj signaling,has
R117 T195 T195 ROOT has,has
R118 T196 T198 det a,role
R119 T197 T198 amod major,role
R120 T198 T195 dobj role,has
R121 T199 T198 prep in,role
R122 T200 T199 pcomp regulating,in
R123 T201 T202 compound cell,proliferation
R124 T202 T200 dobj proliferation,regulating

GO-BP

Id Subject Object Predicate Lexical cue
T755 133-149 http://purl.obolibrary.org/obo/GO_0006955 denotes immune responses
T756 77-84 http://purl.obolibrary.org/obo/GO_0023052 denotes signals
T757 182-191 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T766 119-139 http://purl.obolibrary.org/obo/GO_0002449 denotes cell-mediated immune
T767 119-139 http://purl.obolibrary.org/obo/GO_0002456 denotes cell-mediated immune
T768 119-139 http://purl.obolibrary.org/obo/GO_0019724 denotes cell-mediated immune
T769 119-139 http://purl.obolibrary.org/obo/GO_0002228 denotes cell-mediated immune
T770 119-149 http://purl.obolibrary.org/obo/GO_0002443 denotes cell-mediated immune responses
T771 119-139 http://purl.obolibrary.org/obo/GO_0001909 denotes cell-mediated immune
T772 223-241 http://purl.obolibrary.org/obo/GO_0008283 denotes cell proliferation

GO-MF

Id Subject Object Predicate Lexical cue
T794 55-61 http://purl.obolibrary.org/obo/GO_0005488 denotes ligand
T795 243-251 http://purl.obolibrary.org/obo/GO_0003823 denotes antibody

GO-CC

Id Subject Object Predicate Lexical cue
T799 119-123 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T800 223-227 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T807 243-251 http://purl.obolibrary.org/obo/GO_0019815 denotes antibody
T808 243-251 http://purl.obolibrary.org/obo/GO_0042571 denotes antibody

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T706 43-47 P25942 denotes CD40
T707 62-67 P29965 denotes CD154
T708 177-181 P25942 denotes CD40

test2

Id Subject Object Predicate Lexical cue
T45 29-39 Binding denotes engagement
T46 43-47 Protein denotes CD40
T47 55-61 Protein denotes ligand
T48 62-67 Protein denotes CD154
T49 177-181 Protein denotes CD40
R21 T46 T45 themeOf CD40,engagement
R22 T48 T45 themeOf CD154,engagement