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PMC:3148254 / 21907-22083 JSONTXT

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bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T6697 37-41 Protein denotes HOIP
T6698 45-53 Positive_regulation denotes required
T6699 62-73 Binding denotes association
T6700 77-81 Protein denotes IKKγ
T6701 87-91 Protein denotes CD40
T6702 124-131 Positive_regulation denotes coupled
T6703 135-167 Protein_modification denotes post-translational modifications
T6704 171-175 Protein denotes IKKγ
R5081 T6697 T6698 causeOf HOIP,required
R5082 T6699 T6698 themeOf association,required
R5083 T6699 T6702 causeOf association,coupled
R5084 T6700 T6699 themeOf IKKγ,association
R5085 T6701 T6699 themeOf CD40,association
R5086 T6703 T6702 themeOf post-translational modifications,coupled
R5087 T6704 T6703 themeOf IKKγ,post-translational modifications

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T8693 77-81 Protein denotes IKKγ
T8694 87-91 Protein denotes CD40
T8695 62-73 Binding denotes association
R6832 T8693 T8695 themeOf IKKγ,association
R6838 T8694 T8695 themeOf CD40,association

events-check-again

Id Subject Object Predicate Lexical cue
T8792 37-41 Protein denotes HOIP
T8793 45-53 Positive_regulation denotes required
T8794 62-73 Binding denotes association
T8795 77-81 Protein denotes IKKγ
T8796 87-91 Protein denotes CD40
T8797 124-131 Positive_regulation denotes coupled
T8798 135-167 Protein_modification denotes post-translational modifications
T8799 171-175 Protein denotes IKKγ
R6835 T8792 T8793 causeOf HOIP,required
R6836 T8794 T8793 themeOf association,required
R6837 T8794 T8797 causeOf association,coupled
R6839 T8795 T8794 themeOf IKKγ,association
R6840 T8796 T8794 themeOf CD40,association
R6841 T8798 T8797 themeOf post-translational modifications,coupled
R6842 T8799 T8798 themeOf IKKγ,post-translational modifications

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T8188 110-120 Anaphor denotes this event
T8189 62-73 Antecedent denotes association
R6482 T8188 T8189 boundBy this event,association

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T8153 0-7 RB denotes Overall
T8154 7-8 -COMMA- denotes ,
T8155 9-14 DT denotes these
T8156 15-19 NN denotes data
T8157 20-31 VB denotes demonstrate
T8158 32-36 IN denotes that
T8159 37-41 NN denotes HOIP
T8160 42-44 VB denotes is
T8161 45-53 VB denotes required
T8162 54-57 IN denotes for
T8163 58-61 DT denotes the
T8164 62-73 NN denotes association
T8165 74-76 IN denotes of
T8166 77-81 NN denotes IKKγ
T8167 82-86 IN denotes with
T8168 87-91 NN denotes CD40
T8169 91-92 -COMMA- denotes ,
T8170 93-96 CC denotes and
T8171 97-104 VB denotes suggest
T8172 105-109 IN denotes that
T8173 110-114 DT denotes this
T8174 115-120 NN denotes event
T8175 121-123 VB denotes is
T8176 124-131 VB denotes coupled
T8177 132-134 TO denotes to
T8178 135-153 JJ denotes post-translational
T8179 154-167 NN denotes modifications
T8180 168-170 IN denotes of
T8181 171-175 NN denotes IKKγ
R6429 T8156 T8155 arg1Of data,these
R6430 T8156 T8157 arg1Of data,demonstrate
R6431 T8156 T8171 arg1Of data,suggest
R6432 T8157 T8170 arg1Of demonstrate,and
R6434 T8159 T8160 arg1Of HOIP,is
R6435 T8159 T8161 arg2Of HOIP,required
R6436 T8161 T8157 arg2Of required,demonstrate
R6437 T8161 T8158 arg1Of required,that
R6438 T8161 T8160 arg2Of required,is
R6439 T8161 T8162 arg1Of required,for
R6440 T8164 T8162 arg2Of association,for
R6441 T8164 T8163 arg1Of association,the
R6442 T8164 T8165 arg1Of association,of
R6443 T8164 T8167 arg1Of association,with
R6444 T8166 T8165 arg2Of IKKγ,of
R6447 T8168 T8167 arg2Of CD40,with
R6450 T8170 T8153 arg1Of and,Overall
R6451 T8170 T8154 arg1Of and,","
R6452 T8170 T8169 arg1Of and,","
R6453 T8171 T8170 arg2Of suggest,and
R6454 T8174 T8173 arg1Of event,this
R6455 T8174 T8175 arg1Of event,is
R6456 T8174 T8176 arg2Of event,coupled
R6458 T8176 T8171 arg2Of coupled,suggest
R6459 T8176 T8172 arg1Of coupled,that
R6460 T8176 T8175 arg2Of coupled,is
R6461 T8176 T8177 arg1Of coupled,to
R6464 T8179 T8177 arg2Of modifications,to
R6465 T8179 T8178 arg1Of modifications,post-translational
R6466 T8179 T8180 arg1Of modifications,of
R6468 T8181 T8180 arg2Of IKKγ,of

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T7445 0-7 RB denotes Overall
T7446 7-8 , denotes ,
T7447 9-14 DT denotes these
T7448 15-19 NNS denotes data
T7449 20-31 VBP denotes demonstrate
T7450 32-36 IN denotes that
T7451 37-41 NNP denotes HOIP
T7452 42-44 VBZ denotes is
T7453 45-53 VBN denotes required
T7454 54-57 IN denotes for
T7455 58-61 DT denotes the
T7456 62-73 NN denotes association
T7457 74-76 IN denotes of
T7458 77-81 NNP denotes IKKγ
T7459 82-86 IN denotes with
T7460 87-91 NNP denotes CD40
T7461 91-92 , denotes ,
T7462 93-96 CC denotes and
T7463 97-104 VBP denotes suggest
T7464 105-109 IN denotes that
T7465 110-114 DT denotes this
T7466 115-120 NN denotes event
T7467 121-123 VBZ denotes is
T7468 124-131 VBN denotes coupled
T7469 132-134 TO denotes to
T7470 135-153 JJ denotes post-translational
T7471 154-167 NNS denotes modifications
T7472 168-170 IN denotes of
T7473 171-175 NNP denotes IKKγ
T7474 175-176 . denotes .
R5803 T7445 T7449 advmod Overall,demonstrate
R5804 T7446 T7449 punct ",",demonstrate
R5805 T7447 T7448 det these,data
R5806 T7448 T7449 nsubj data,demonstrate
R5807 T7449 T7449 ROOT demonstrate,demonstrate
R5808 T7450 T7453 mark that,required
R5809 T7451 T7453 nsubjpass HOIP,required
R5810 T7452 T7453 auxpass is,required
R5811 T7453 T7449 ccomp required,demonstrate
R5812 T7454 T7453 prep for,required
R5813 T7455 T7456 det the,association
R5814 T7456 T7454 pobj association,for
R5815 T7457 T7456 prep of,association
R5816 T7458 T7457 pobj IKKγ,of
R5817 T7459 T7456 prep with,association
R5818 T7460 T7459 pobj CD40,with
R5819 T7461 T7453 punct ",",required
R5820 T7462 T7453 cc and,required
R5821 T7463 T7449 conj suggest,demonstrate
R5822 T7464 T7468 mark that,coupled
R5823 T7465 T7466 det this,event
R5824 T7466 T7468 nsubjpass event,coupled
R5825 T7467 T7468 auxpass is,coupled
R5826 T7468 T7463 ccomp coupled,suggest
R5827 T7469 T7468 prep to,coupled
R5828 T7470 T7471 amod post-translational,modifications
R5829 T7471 T7469 pobj modifications,to
R5830 T7472 T7471 prep of,modifications
R5831 T7473 T7472 pobj IKKγ,of
R5832 T7474 T7449 punct .,demonstrate

GO-BP

Id Subject Object Predicate Lexical cue
T8294 135-167 http://purl.obolibrary.org/obo/GO_0043687 denotes post-translational modifications
T8296 135-167 http://purl.obolibrary.org/obo/GO_1901873 denotes post-translational modifications
T8298 135-167 http://purl.obolibrary.org/obo/GO_1901874 denotes post-translational modifications
T8300 135-167 http://purl.obolibrary.org/obo/GO_1901875 denotes post-translational modifications

sentences

Id Subject Object Predicate Lexical cue
T6729 0-176 Sentence denotes Overall, these data demonstrate that HOIP is required for the association of IKKγ with CD40, and suggest that this event is coupled to post-translational modifications of IKKγ.
T148 0-176 Sentence denotes Overall, these data demonstrate that HOIP is required for the association of IKKγ with CD40, and suggest that this event is coupled to post-translational modifications of IKKγ.

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T8252 37-41 Q96EP0 denotes HOIP
T8253 87-91 P25942 denotes CD40

test2

Id Subject Object Predicate Lexical cue
T6565 37-41 Protein denotes HOIP
T6566 45-53 Positive_regulation denotes required
T6567 62-73 Binding denotes association
T6568 77-81 Protein denotes IKKγ
T6569 87-91 Protein denotes CD40
T6570 124-131 Positive_regulation denotes coupled
T6571 135-153 Protein_modification denotes post-translational
T6572 154-167 Negative_regulation denotes modifications
T6573 171-175 Protein denotes IKKγ
R4995 T6565 T6566 causeOf HOIP,required
R4996 T6567 T6566 themeOf association,required
R4997 T6568 T6567 themeOf IKKγ,association
R4998 T6569 T6567 themeOf CD40,association
R4999 T6571 T6570 themeOf post-translational,coupled
R5000 T6573 T6571 themeOf IKKγ,post-translational