PMC:3148254 / 2146-2245
Annnotations
bionlp-st-ge-2016-reference
{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T1116","span":{"begin":12,"end":16},"obj":"Protein"},{"id":"T1117","span":{"begin":18,"end":23},"obj":"Protein"},{"id":"T1118","span":{"begin":28,"end":37},"obj":"Gene_expression"},{"id":"T1119","span":{"begin":70,"end":74},"obj":"Protein"},{"id":"T1120","span":{"begin":75,"end":85},"obj":"Binding"}],"relations":[{"id":"R776","pred":"themeOf","subj":"T1117","obj":"T1118"},{"id":"R777","pred":"themeOf","subj":"T1119","obj":"T1120"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":" ligand for CD40, CD154, is expressed primarily by activated T cells. CD40 engagement leads to the "}
bionlp-st-ge-2016-reference-tees
{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T2563","span":{"begin":12,"end":16},"obj":"Protein"},{"id":"T2564","span":{"begin":18,"end":23},"obj":"Protein"},{"id":"T2566","span":{"begin":28,"end":37},"obj":"Gene_expression"},{"id":"T2567","span":{"begin":28,"end":37},"obj":"Gene_expression"},{"id":"T2568","span":{"begin":70,"end":74},"obj":"Protein"},{"id":"T2571","span":{"begin":75,"end":85},"obj":"Binding"}],"relations":[{"id":"R1968","pred":"themeOf","subj":"T2563","obj":"T2566"},{"id":"R1969","pred":"themeOf","subj":"T2564","obj":"T2567"},{"id":"R1970","pred":"themeOf","subj":"T2568","obj":"T2571"}],"text":" ligand for CD40, CD154, is expressed primarily by activated T cells. CD40 engagement leads to the "}
events-check-again
{"project":"events-check-again","denotations":[{"id":"T2645","span":{"begin":12,"end":16},"obj":"Protein"},{"id":"T2646","span":{"begin":18,"end":23},"obj":"Protein"},{"id":"T2647","span":{"begin":28,"end":37},"obj":"Gene_expression"},{"id":"T2648","span":{"begin":70,"end":74},"obj":"Protein"},{"id":"T2649","span":{"begin":75,"end":85},"obj":"Binding"}],"relations":[{"id":"R2010","pred":"themeOf","subj":"T2646","obj":"T2647"},{"id":"R2012","pred":"themeOf","subj":"T2648","obj":"T2649"}],"text":" ligand for CD40, CD154, is expressed primarily by activated T cells. CD40 engagement leads to the "}
pmc-enju-pas
{"project":"pmc-enju-pas","denotations":[{"id":"T1777","span":{"begin":1,"end":7},"obj":"NN"},{"id":"T1778","span":{"begin":8,"end":11},"obj":"IN"},{"id":"T1779","span":{"begin":12,"end":16},"obj":"NN"},{"id":"T1780","span":{"begin":16,"end":17},"obj":"-COMMA-"},{"id":"T1781","span":{"begin":18,"end":23},"obj":"NN"},{"id":"T1782","span":{"begin":23,"end":24},"obj":"-COMMA-"},{"id":"T1783","span":{"begin":25,"end":27},"obj":"VB"},{"id":"T1784","span":{"begin":28,"end":37},"obj":"VB"},{"id":"T1785","span":{"begin":38,"end":47},"obj":"RB"},{"id":"T1786","span":{"begin":48,"end":50},"obj":"IN"},{"id":"T1787","span":{"begin":51,"end":60},"obj":"VB"},{"id":"T1788","span":{"begin":61,"end":62},"obj":"NN"},{"id":"T1789","span":{"begin":63,"end":68},"obj":"NN"},{"id":"T1790","span":{"begin":70,"end":74},"obj":"NN"},{"id":"T1791","span":{"begin":75,"end":85},"obj":"NN"},{"id":"T1792","span":{"begin":86,"end":91},"obj":"VB"},{"id":"T1793","span":{"begin":92,"end":94},"obj":"TO"},{"id":"T1794","span":{"begin":95,"end":98},"obj":"DT"}],"relations":[{"id":"R1396","pred":"arg1Of","subj":"T1777","obj":"T1778"},{"id":"R1397","pred":"arg1Of","subj":"T1777","obj":"T1783"},{"id":"R1398","pred":"arg2Of","subj":"T1777","obj":"T1784"},{"id":"R1399","pred":"arg2Of","subj":"T1779","obj":"T1778"},{"id":"R1400","pred":"arg1Of","subj":"T1779","obj":"T1780"},{"id":"R1401","pred":"arg2Of","subj":"T1781","obj":"T1780"},{"id":"R1403","pred":"arg1Of","subj":"T1784","obj":"T1782"},{"id":"R1404","pred":"arg2Of","subj":"T1784","obj":"T1783"},{"id":"R1405","pred":"arg1Of","subj":"T1784","obj":"T1785"},{"id":"R1406","pred":"arg1Of","subj":"T1789","obj":"T1784"},{"id":"R1407","pred":"arg2Of","subj":"T1789","obj":"T1786"},{"id":"R1408","pred":"arg2Of","subj":"T1789","obj":"T1787"},{"id":"R1409","pred":"arg1Of","subj":"T1789","obj":"T1788"},{"id":"R1410","pred":"arg1Of","subj":"T1791","obj":"T1790"},{"id":"R1411","pred":"arg1Of","subj":"T1791","obj":"T1792"},{"id":"R1412","pred":"arg1Of","subj":"T1792","obj":"T1793"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":" ligand for CD40, CD154, is expressed primarily by activated T cells. CD40 engagement leads to the "}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T1252","span":{"begin":1,"end":7},"obj":"NN"},{"id":"T1253","span":{"begin":8,"end":11},"obj":"IN"},{"id":"T1254","span":{"begin":12,"end":16},"obj":"NNP"},{"id":"T1255","span":{"begin":16,"end":17},"obj":","},{"id":"T1256","span":{"begin":18,"end":23},"obj":"NNP"},{"id":"T1257","span":{"begin":23,"end":24},"obj":","},{"id":"T1258","span":{"begin":25,"end":27},"obj":"VBZ"},{"id":"T1259","span":{"begin":28,"end":37},"obj":"VBN"},{"id":"T1260","span":{"begin":38,"end":47},"obj":"RB"},{"id":"T1261","span":{"begin":48,"end":50},"obj":"IN"},{"id":"T1262","span":{"begin":51,"end":60},"obj":"VBN"},{"id":"T1263","span":{"begin":61,"end":62},"obj":"NNP"},{"id":"T1264","span":{"begin":63,"end":68},"obj":"NNS"},{"id":"T1265","span":{"begin":68,"end":69},"obj":"."},{"id":"T1266","span":{"begin":70,"end":74},"obj":"CD"},{"id":"T1267","span":{"begin":75,"end":85},"obj":"NN"},{"id":"T1268","span":{"begin":86,"end":91},"obj":"VBZ"},{"id":"T1269","span":{"begin":92,"end":94},"obj":"TO"},{"id":"T1270","span":{"begin":95,"end":98},"obj":"DT"}],"relations":[{"id":"R871","pred":"prep","subj":"T1253","obj":"T1252"},{"id":"R872","pred":"pobj","subj":"T1254","obj":"T1253"},{"id":"R873","pred":"punct","subj":"T1255","obj":"T1254"},{"id":"R874","pred":"appos","subj":"T1256","obj":"T1254"},{"id":"R875","pred":"punct","subj":"T1257","obj":"T1259"},{"id":"R876","pred":"auxpass","subj":"T1258","obj":"T1259"},{"id":"R878","pred":"advmod","subj":"T1260","obj":"T1261"},{"id":"R879","pred":"agent","subj":"T1261","obj":"T1259"},{"id":"R880","pred":"amod","subj":"T1262","obj":"T1264"},{"id":"R881","pred":"compound","subj":"T1263","obj":"T1264"},{"id":"R882","pred":"pobj","subj":"T1264","obj":"T1261"},{"id":"R884","pred":"nummod","subj":"T1266","obj":"T1267"},{"id":"R885","pred":"nsubj","subj":"T1267","obj":"T1268"},{"id":"R886","pred":"ROOT","subj":"T1268","obj":"T1268"},{"id":"R887","pred":"prep","subj":"T1269","obj":"T1268"}],"text":" ligand for CD40, CD154, is expressed primarily by activated T cells. CD40 engagement leads to the "}
GO-MF
{"project":"GO-MF","denotations":[{"id":"T2386","span":{"begin":1,"end":7},"obj":"http://purl.obolibrary.org/obo/GO_0005488"}],"text":" ligand for CD40, CD154, is expressed primarily by activated T cells. CD40 engagement leads to the "}
GO-CC
{"project":"GO-CC","denotations":[{"id":"T2416","span":{"begin":63,"end":68},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":" ligand for CD40, CD154, is expressed primarily by activated T cells. CD40 engagement leads to the "}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T2247","span":{"begin":12,"end":16},"obj":"P25942"},{"id":"T2248","span":{"begin":18,"end":23},"obj":"P29965"},{"id":"T2249","span":{"begin":70,"end":74},"obj":"P25942"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":" ligand for CD40, CD154, is expressed primarily by activated T cells. CD40 engagement leads to the "}
test2
{"project":"test2","denotations":[{"id":"T1051","span":{"begin":12,"end":16},"obj":"Protein"},{"id":"T1052","span":{"begin":18,"end":23},"obj":"Protein"},{"id":"T1053","span":{"begin":28,"end":37},"obj":"Gene_expression"},{"id":"T1054","span":{"begin":70,"end":74},"obj":"Protein"},{"id":"T1055","span":{"begin":75,"end":85},"obj":"Binding"}],"relations":[{"id":"R743","pred":"themeOf","subj":"T1051","obj":"T1053"},{"id":"R744","pred":"themeOf","subj":"T1052","obj":"T1053"},{"id":"R745","pred":"themeOf","subj":"T1054","obj":"T1055"}],"text":" ligand for CD40, CD154, is expressed primarily by activated T cells. CD40 engagement leads to the "}