PMC:3148254 / 19134-19320
Annnotations
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T16811 | 151-156 | Protein | denotes | TRAF3 |
T16812 | 161-165 | Protein | denotes | HOIP |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17902 | 151-156 | Protein | denotes | TRAF3 |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17946 | 151-156 | Protein | denotes | TRAF3 |
T17947 | 161-165 | Protein | denotes | HOIP |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17656 | 0-7 | NN | denotes | Protein |
T17657 | 8-15 | NN | denotes | samples |
T17658 | 16-17 | -LRB- | denotes | ( |
T17659 | 17-22 | CC | denotes | minus |
T17660 | 23-28 | DT | denotes | those |
T17661 | 29-36 | VB | denotes | treated |
T17662 | 37-41 | IN | denotes | with |
T17663 | 42-53 | NN | denotes | phosphatase |
T17664 | 53-54 | -RRB- | denotes | ) |
T17665 | 55-59 | VB | denotes | were |
T17666 | 60-64 | RB | denotes | also |
T17667 | 65-77 | VB | denotes | fractionated |
T17668 | 78-80 | IN | denotes | on |
T17669 | 81-82 | DT | denotes | a |
T17670 | 83-91 | JJ | denotes | separate |
T17671 | 92-95 | NN | denotes | gel |
T17672 | 96-97 | -LRB- | denotes | ( |
T17673 | 97-102 | JJ | denotes | lower |
T17674 | 103-113 | NN | denotes | acrylamide |
T17675 | 114-127 | NN | denotes | concentration |
T17676 | 127-128 | -RRB- | denotes | ) |
T17677 | 129-132 | IN | denotes | for |
T17678 | 133-136 | DT | denotes | the |
T17679 | 137-147 | NN | denotes | evaluation |
T17680 | 148-150 | IN | denotes | of |
T17681 | 151-156 | NN | denotes | TRAF3 |
T17682 | 157-160 | CC | denotes | and |
T17683 | 161-165 | NN | denotes | HOIP |
T17684 | 166-167 | -LRB- | denotes | ( |
T17685 | 167-173 | NN | denotes | bottom |
T17686 | 174-177 | CD | denotes | two |
T17687 | 178-184 | NN | denotes | panels |
T17688 | 184-185 | -RRB- | denotes | ) |
R14017 | T17657 | T17656 | arg1Of | samples,Protein |
R14018 | T17657 | T17665 | arg1Of | samples,were |
R14019 | T17657 | T17667 | arg2Of | samples,fractionated |
R14020 | T17660 | T17661 | arg1Of | those,treated |
R14021 | T17661 | T17658 | arg2Of | treated,( |
R14022 | T17661 | T17659 | arg1Of | treated,minus |
R14023 | T17661 | T17662 | arg1Of | treated,with |
R14024 | T17663 | T17662 | arg2Of | phosphatase,with |
R14025 | T17664 | T17658 | arg3Of | ),( |
R14026 | T17667 | T17658 | arg1Of | fractionated,( |
R14027 | T17667 | T17665 | arg2Of | fractionated,were |
R14028 | T17667 | T17666 | arg1Of | fractionated,also |
R14029 | T17667 | T17668 | arg1Of | fractionated,on |
R14030 | T17667 | T17677 | arg1Of | fractionated,for |
R14031 | T17671 | T17668 | arg2Of | gel,on |
R14032 | T17671 | T17669 | arg1Of | gel,a |
R14033 | T17671 | T17670 | arg1Of | gel,separate |
R14034 | T17671 | T17672 | arg1Of | gel,( |
R14035 | T17675 | T17672 | arg2Of | concentration,( |
R14036 | T17675 | T17673 | arg1Of | concentration,lower |
R14037 | T17675 | T17674 | arg1Of | concentration,acrylamide |
R14038 | T17676 | T17672 | arg3Of | ),( |
R14039 | T17679 | T17677 | arg2Of | evaluation,for |
R14040 | T17679 | T17678 | arg1Of | evaluation,the |
R14041 | T17679 | T17680 | arg1Of | evaluation,of |
R14042 | T17681 | T17682 | arg1Of | TRAF3,and |
R14043 | T17682 | T17680 | arg2Of | and,of |
R14044 | T17682 | T17684 | arg1Of | and,( |
R14045 | T17683 | T17682 | arg2Of | HOIP,and |
R14046 | T17687 | T17684 | arg2Of | panels,( |
R14047 | T17687 | T17685 | arg1Of | panels,bottom |
R14048 | T17687 | T17686 | arg1Of | panels,two |
R14049 | T17688 | T17684 | arg3Of | ),( |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17238 | 0-7 | NN | denotes | Protein |
T17239 | 8-15 | NNS | denotes | samples |
T17240 | 16-17 | -LRB- | denotes | ( |
T17241 | 17-22 | CC | denotes | minus |
T17242 | 23-28 | DT | denotes | those |
T17243 | 29-36 | VBN | denotes | treated |
T17244 | 37-41 | IN | denotes | with |
T17245 | 42-53 | NN | denotes | phosphatase |
T17246 | 53-54 | -RRB- | denotes | ) |
T17247 | 55-59 | VBD | denotes | were |
T17248 | 60-64 | RB | denotes | also |
T17249 | 65-77 | VBN | denotes | fractionated |
T17250 | 78-80 | IN | denotes | on |
T17251 | 81-82 | DT | denotes | a |
T17252 | 83-91 | JJ | denotes | separate |
T17253 | 92-95 | NN | denotes | gel |
T17254 | 96-97 | -LRB- | denotes | ( |
T17255 | 97-102 | JJR | denotes | lower |
T17256 | 103-113 | NN | denotes | acrylamide |
T17257 | 114-127 | NN | denotes | concentration |
T17258 | 127-128 | -RRB- | denotes | ) |
T17259 | 129-132 | IN | denotes | for |
T17260 | 133-136 | DT | denotes | the |
T17261 | 137-147 | NN | denotes | evaluation |
T17262 | 148-150 | IN | denotes | of |
T17263 | 151-156 | CD | denotes | TRAF3 |
T17264 | 157-160 | CC | denotes | and |
T17265 | 161-165 | NNP | denotes | HOIP |
T17266 | 166-167 | -LRB- | denotes | ( |
T17267 | 167-173 | JJ | denotes | bottom |
T17268 | 174-177 | CD | denotes | two |
T17269 | 178-184 | NNS | denotes | panels |
T17270 | 184-185 | -RRB- | denotes | ) |
T17271 | 185-186 | . | denotes | . |
R13591 | T17238 | T17239 | compound | Protein,samples |
R13592 | T17239 | T17249 | nsubjpass | samples,fractionated |
R13593 | T17240 | T17239 | punct | (,samples |
R13594 | T17241 | T17242 | acomp | minus,those |
R13595 | T17242 | T17239 | appos | those,samples |
R13596 | T17243 | T17242 | acl | treated,those |
R13597 | T17244 | T17243 | prep | with,treated |
R13598 | T17245 | T17244 | pobj | phosphatase,with |
R13599 | T17246 | T17239 | punct | ),samples |
R13600 | T17247 | T17249 | auxpass | were,fractionated |
R13601 | T17248 | T17249 | advmod | also,fractionated |
R13602 | T17249 | T17249 | ROOT | fractionated,fractionated |
R13603 | T17250 | T17249 | prep | on,fractionated |
R13604 | T17251 | T17253 | det | a,gel |
R13605 | T17252 | T17253 | amod | separate,gel |
R13606 | T17253 | T17250 | pobj | gel,on |
R13607 | T17254 | T17253 | punct | (,gel |
R13608 | T17255 | T17257 | amod | lower,concentration |
R13609 | T17256 | T17257 | compound | acrylamide,concentration |
R13610 | T17257 | T17253 | appos | concentration,gel |
R13611 | T17258 | T17253 | punct | ),gel |
R13612 | T17259 | T17249 | prep | for,fractionated |
R13613 | T17260 | T17261 | det | the,evaluation |
R13614 | T17261 | T17259 | pobj | evaluation,for |
R13615 | T17262 | T17261 | prep | of,evaluation |
R13616 | T17263 | T17262 | pobj | TRAF3,of |
R13617 | T17264 | T17263 | cc | and,TRAF3 |
R13618 | T17265 | T17263 | conj | HOIP,TRAF3 |
R13619 | T17266 | T17269 | punct | (,panels |
R13620 | T17267 | T17269 | amod | bottom,panels |
R13621 | T17268 | T17269 | nummod | two,panels |
R13622 | T17269 | T17265 | appos | panels,HOIP |
R13623 | T17270 | T17265 | punct | ),HOIP |
R13624 | T17271 | T17249 | punct | .,fractionated |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17752 | 42-53 | http://purl.obolibrary.org/obo/GO_0016791 | denotes | phosphatase |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17760 | 42-53 | http://purl.obolibrary.org/obo/GO_0016791 | denotes | phosphatase |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T16828 | 0-186 | Sentence | denotes | Protein samples (minus those treated with phosphatase) were also fractionated on a separate gel (lower acrylamide concentration) for the evaluation of TRAF3 and HOIP (bottom two panels). |
T132 | 0-186 | Sentence | denotes | Protein samples (minus those treated with phosphatase) were also fractionated on a separate gel (lower acrylamide concentration) for the evaluation of TRAF3 and HOIP (bottom two panels). |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17729 | 151-156 | Q13114 | denotes | TRAF3 |
T17730 | 161-165 | Q96EP0 | denotes | HOIP |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T16766 | 151-156 | Protein | denotes | TRAF3 |
T16767 | 161-165 | Protein | denotes | HOIP |