PMC:3148254 / 1814-2031 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"http://pubannotation.org/docs/sourcedb/PMC/sourceid/3148254","sourcedb":"PMC","sourceid":"3148254","source_url":"http://www.ncbi.nlm.nih.gov/pmc/3148254","text":" component of the CD40 signaling pathway.\n\nIntroduction\nCD40 signaling in professional antigen-presenting cells, including B cells, macrophages, and dendritic cells, is critical for the efficient activation of humoral","divisions":[{"label":"Title","span":{"begin":43,"end":55}}],"tracks":[{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T120","span":{"begin":18,"end":22},"obj":"Protein"},{"id":"T1114","span":{"begin":56,"end":60},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"attributes":[{"subj":"T120","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T1114","pred":"source","obj":"bionlp-st-ge-2016-reference"}]},{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T940","span":{"begin":18,"end":22},"obj":"Protein"},{"id":"T2561","span":{"begin":56,"end":60},"obj":"Protein"}],"attributes":[{"subj":"T940","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T2561","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"}]},{"project":"events-check-again","denotations":[{"id":"T980","span":{"begin":18,"end":22},"obj":"Protein"},{"id":"T2643","span":{"begin":56,"end":60},"obj":"Protein"}],"attributes":[{"subj":"T980","pred":"source","obj":"events-check-again"},{"subj":"T2643","pred":"source","obj":"events-check-again"}]},{"project":"pmc-enju-pas","denotations":[{"id":"T696","span":{"begin":1,"end":10},"obj":"NN"},{"id":"T697","span":{"begin":11,"end":13},"obj":"IN"},{"id":"T698","span":{"begin":14,"end":17},"obj":"DT"},{"id":"T699","span":{"begin":18,"end":22},"obj":"NN"},{"id":"T700","span":{"begin":23,"end":32},"obj":"NN"},{"id":"T701","span":{"begin":33,"end":40},"obj":"NN"},{"id":"T1725","span":{"begin":56,"end":60},"obj":"NN"},{"id":"T1726","span":{"begin":61,"end":70},"obj":"NN"},{"id":"T1727","span":{"begin":71,"end":73},"obj":"IN"},{"id":"T1728","span":{"begin":74,"end":86},"obj":"JJ"},{"id":"T1729","span":{"begin":87,"end":105},"obj":"JJ"},{"id":"T1730","span":{"begin":106,"end":111},"obj":"NN"},{"id":"T1731","span":{"begin":111,"end":112},"obj":"-COMMA-"},{"id":"T1732","span":{"begin":113,"end":122},"obj":"VB"},{"id":"T1733","span":{"begin":123,"end":124},"obj":"NN"},{"id":"T1734","span":{"begin":125,"end":130},"obj":"NN"},{"id":"T1735","span":{"begin":130,"end":131},"obj":"-COMMA-"},{"id":"T1736","span":{"begin":132,"end":143},"obj":"NN"},{"id":"T1737","span":{"begin":143,"end":144},"obj":"-COMMA-"},{"id":"T1738","span":{"begin":145,"end":148},"obj":"CC"},{"id":"T1739","span":{"begin":149,"end":158},"obj":"JJ"},{"id":"T1740","span":{"begin":159,"end":164},"obj":"NN"},{"id":"T1741","span":{"begin":164,"end":165},"obj":"-COMMA-"},{"id":"T1742","span":{"begin":166,"end":168},"obj":"VB"},{"id":"T1743","span":{"begin":169,"end":177},"obj":"JJ"},{"id":"T1744","span":{"begin":178,"end":181},"obj":"IN"},{"id":"T1745","span":{"begin":182,"end":185},"obj":"DT"},{"id":"T1746","span":{"begin":186,"end":195},"obj":"JJ"},{"id":"T1747","span":{"begin":196,"end":206},"obj":"NN"},{"id":"T1748","span":{"begin":207,"end":209},"obj":"IN"},{"id":"T1749","span":{"begin":210,"end":217},"obj":"JJ"}],"relations":[{"id":"R610","pred":"arg1Of","subj":"T696","obj":"T697"},{"id":"R611","pred":"arg2Of","subj":"T701","obj":"T697"},{"id":"R612","pred":"arg1Of","subj":"T701","obj":"T698"},{"id":"R613","pred":"arg1Of","subj":"T701","obj":"T699"},{"id":"R614","pred":"arg1Of","subj":"T701","obj":"T700"},{"id":"R1343","pred":"arg1Of","subj":"T1726","obj":"T1725"},{"id":"R1344","pred":"arg1Of","subj":"T1726","obj":"T1727"},{"id":"R1345","pred":"arg1Of","subj":"T1726","obj":"T1742"},{"id":"R1346","pred":"arg1Of","subj":"T1726","obj":"T1743"},{"id":"R1347","pred":"arg2Of","subj":"T1730","obj":"T1727"},{"id":"R1348","pred":"arg1Of","subj":"T1730","obj":"T1728"},{"id":"R1349","pred":"arg1Of","subj":"T1730","obj":"T1729"},{"id":"R1350","pred":"arg1Of","subj":"T1730","obj":"T1731"},{"id":"R1351","pred":"arg1Of","subj":"T1730","obj":"T1732"},{"id":"R1352","pred":"arg1Of","subj":"T1734","obj":"T1733"},{"id":"R1353","pred":"arg1Of","subj":"T1734","obj":"T1735"},{"id":"R1354","pred":"arg1Of","subj":"T1735","obj":"T1738"},{"id":"R1355","pred":"arg2Of","subj":"T1736","obj":"T1735"},{"id":"R1356","pred":"arg2Of","subj":"T1738","obj":"T1732"},{"id":"R1357","pred":"arg1Of","subj":"T1738","obj":"T1737"},{"id":"R1358","pred":"arg2Of","subj":"T1740","obj":"T1738"},{"id":"R1359","pred":"arg1Of","subj":"T1740","obj":"T1739"},{"id":"R1360","pred":"arg1Of","subj":"T1742","obj":"T1741"},{"id":"R1365","pred":"arg2Of","subj":"T1743","obj":"T1742"},{"id":"R1366","pred":"arg1Of","subj":"T1743","obj":"T1744"},{"id":"R1367","pred":"arg2Of","subj":"T1747","obj":"T1744"},{"id":"R1368","pred":"arg1Of","subj":"T1747","obj":"T1745"},{"id":"R1369","pred":"arg1Of","subj":"T1747","obj":"T1746"},{"id":"R1370","pred":"arg1Of","subj":"T1747","obj":"T1748"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T696","pred":"source","obj":"pmc-enju-pas"},{"subj":"T697","pred":"source","obj":"pmc-enju-pas"},{"subj":"T698","pred":"source","obj":"pmc-enju-pas"},{"subj":"T699","pred":"source","obj":"pmc-enju-pas"},{"subj":"T700","pred":"source","obj":"pmc-enju-pas"},{"subj":"T701","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1725","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1726","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1727","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1728","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1729","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1730","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1731","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1732","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1733","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1734","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1735","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1736","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1737","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1738","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1739","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1740","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1741","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1742","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1743","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1744","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1745","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1746","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1747","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1748","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1749","pred":"source","obj":"pmc-enju-pas"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T418","span":{"begin":1,"end":10},"obj":"NN"},{"id":"T419","span":{"begin":11,"end":13},"obj":"IN"},{"id":"T420","span":{"begin":14,"end":17},"obj":"DT"},{"id":"T421","span":{"begin":18,"end":22},"obj":"NNP"},{"id":"T422","span":{"begin":23,"end":32},"obj":"VBG"},{"id":"T423","span":{"begin":33,"end":40},"obj":"NN"},{"id":"T424","span":{"begin":40,"end":41},"obj":"."},{"id":"T1199","span":{"begin":56,"end":60},"obj":"CD"},{"id":"T1200","span":{"begin":61,"end":70},"obj":"VBG"},{"id":"T1201","span":{"begin":71,"end":73},"obj":"IN"},{"id":"T1202","span":{"begin":74,"end":86},"obj":"JJ"},{"id":"T1203","span":{"begin":87,"end":105},"obj":"JJ"},{"id":"T1204","span":{"begin":106,"end":111},"obj":"NNS"},{"id":"T1205","span":{"begin":111,"end":112},"obj":","},{"id":"T1206","span":{"begin":113,"end":122},"obj":"VBG"},{"id":"T1207","span":{"begin":123,"end":124},"obj":"NNP"},{"id":"T1208","span":{"begin":125,"end":130},"obj":"NNS"},{"id":"T1209","span":{"begin":130,"end":131},"obj":","},{"id":"T1210","span":{"begin":132,"end":143},"obj":"NNS"},{"id":"T1211","span":{"begin":143,"end":144},"obj":","},{"id":"T1212","span":{"begin":145,"end":148},"obj":"CC"},{"id":"T1213","span":{"begin":149,"end":158},"obj":"JJ"},{"id":"T1214","span":{"begin":159,"end":164},"obj":"NNS"},{"id":"T1215","span":{"begin":164,"end":165},"obj":","},{"id":"T1216","span":{"begin":166,"end":168},"obj":"VBZ"},{"id":"T1217","span":{"begin":169,"end":177},"obj":"JJ"},{"id":"T1218","span":{"begin":178,"end":181},"obj":"IN"},{"id":"T1219","span":{"begin":182,"end":185},"obj":"DT"},{"id":"T1220","span":{"begin":186,"end":195},"obj":"JJ"},{"id":"T1221","span":{"begin":196,"end":206},"obj":"NN"},{"id":"T1222","span":{"begin":207,"end":209},"obj":"IN"},{"id":"T1223","span":{"begin":210,"end":217},"obj":"JJ"}],"relations":[{"id":"R341","pred":"prep","subj":"T419","obj":"T418"},{"id":"R342","pred":"det","subj":"T420","obj":"T421"},{"id":"R343","pred":"pobj","subj":"T421","obj":"T419"},{"id":"R345","pred":"dobj","subj":"T423","obj":"T422"},{"id":"R817","pred":"nummod","subj":"T1199","obj":"T1200"},{"id":"R818","pred":"nsubj","subj":"T1200","obj":"T1216"},{"id":"R819","pred":"prep","subj":"T1201","obj":"T1200"},{"id":"R820","pred":"amod","subj":"T1202","obj":"T1204"},{"id":"R821","pred":"amod","subj":"T1203","obj":"T1204"},{"id":"R822","pred":"pobj","subj":"T1204","obj":"T1201"},{"id":"R823","pred":"punct","subj":"T1205","obj":"T1204"},{"id":"R824","pred":"prep","subj":"T1206","obj":"T1204"},{"id":"R825","pred":"compound","subj":"T1207","obj":"T1208"},{"id":"R826","pred":"pobj","subj":"T1208","obj":"T1206"},{"id":"R827","pred":"punct","subj":"T1209","obj":"T1208"},{"id":"R828","pred":"conj","subj":"T1210","obj":"T1208"},{"id":"R829","pred":"punct","subj":"T1211","obj":"T1210"},{"id":"R830","pred":"cc","subj":"T1212","obj":"T1210"},{"id":"R831","pred":"amod","subj":"T1213","obj":"T1214"},{"id":"R832","pred":"conj","subj":"T1214","obj":"T1210"},{"id":"R833","pred":"punct","subj":"T1215","obj":"T1216"},{"id":"R834","pred":"ROOT","subj":"T1216","obj":"T1216"},{"id":"R835","pred":"acomp","subj":"T1217","obj":"T1216"},{"id":"R836","pred":"prep","subj":"T1218","obj":"T1217"},{"id":"R837","pred":"det","subj":"T1219","obj":"T1221"},{"id":"R838","pred":"amod","subj":"T1220","obj":"T1221"},{"id":"R839","pred":"pobj","subj":"T1221","obj":"T1218"},{"id":"R840","pred":"prep","subj":"T1222","obj":"T1221"}],"attributes":[{"subj":"T418","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T419","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T420","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T421","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T422","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T423","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T424","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1199","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1200","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1201","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1202","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1203","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1204","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1205","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1206","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1207","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1208","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1209","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1210","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1211","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1212","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1213","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1214","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1215","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1216","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1217","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1218","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1219","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1220","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1221","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1222","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1223","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"GO-BP","denotations":[{"id":"T765","span":{"begin":23,"end":32},"obj":"http://purl.obolibrary.org/obo/GO_0023052"},{"id":"T787","span":{"begin":18,"end":40},"obj":"http://purl.obolibrary.org/obo/GO_0023035"},{"id":"T789","span":{"begin":18,"end":40},"obj":"http://purl.obolibrary.org/obo/GO_2000348"},{"id":"T791","span":{"begin":23,"end":40},"obj":"http://purl.obolibrary.org/obo/GO_0007165"},{"id":"T2312","span":{"begin":61,"end":70},"obj":"http://purl.obolibrary.org/obo/GO_0023052"}],"attributes":[{"subj":"T765","pred":"source","obj":"GO-BP"},{"subj":"T787","pred":"source","obj":"GO-BP"},{"subj":"T789","pred":"source","obj":"GO-BP"},{"subj":"T791","pred":"source","obj":"GO-BP"},{"subj":"T2312","pred":"source","obj":"GO-BP"}]},{"project":"GO-CC","denotations":[{"id":"T2413","span":{"begin":106,"end":111},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T2414","span":{"begin":125,"end":130},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T2415","span":{"begin":159,"end":164},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"attributes":[{"subj":"T2413","pred":"source","obj":"GO-CC"},{"subj":"T2414","pred":"source","obj":"GO-CC"},{"subj":"T2415","pred":"source","obj":"GO-CC"}]},{"project":"sentences","denotations":[{"id":"T16","span":{"begin":43,"end":55},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T16","pred":"source","obj":"sentences"}]},{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T739","span":{"begin":18,"end":22},"obj":"P25942"},{"id":"T2245","span":{"begin":56,"end":60},"obj":"P25942"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T739","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T2245","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]},{"project":"test2","denotations":[{"id":"T80","span":{"begin":18,"end":22},"obj":"Protein"},{"id":"T1049","span":{"begin":56,"end":60},"obj":"Protein"}],"attributes":[{"subj":"T80","pred":"source","obj":"test2"},{"subj":"T1049","pred":"source","obj":"test2"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"bionlp-st-ge-2016-reference","color":"#9394ec","default":true},{"id":"bionlp-st-ge-2016-reference-tees","color":"#aeec93"},{"id":"events-check-again","color":"#ec93c8"},{"id":"pmc-enju-pas","color":"#93e2ec"},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#ecdc93"},{"id":"GO-BP","color":"#c293ec"},{"id":"GO-CC","color":"#93eca8"},{"id":"sentences","color":"#ec9397"},{"id":"bionlp-st-ge-2016-uniprot","color":"#93b2ec"},{"id":"test2","color":"#ccec93"}]}]}}