> top > docs > PMC:3148254 > spans > 1751-2040 > annotations

PMC:3148254 / 1751-2040 JSONTXT

Annnotations TAB JSON ListView MergeView

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T119 50-54 Protein denotes HOIP
T120 81-85 Protein denotes CD40
T1114 119-123 Protein denotes CD40

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T940 81-85 Protein denotes CD40
T2561 119-123 Protein denotes CD40

events-check-again

Id Subject Object Predicate Lexical cue
T979 50-54 Protein denotes HOIP
T980 81-85 Protein denotes CD40
T2643 119-123 Protein denotes CD40

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T686 3-13 NN denotes activation
T687 14-17 CC denotes and
T688 18-27 NN denotes signaling
T689 29-34 DT denotes These
T690 35-42 NN denotes results
T691 43-49 VB denotes reveal
T692 50-54 NN denotes HOIP
T693 55-57 IN denotes as
T694 58-59 DT denotes a
T695 60-63 JJ denotes key
T696 64-73 NN denotes component
T697 74-76 IN denotes of
T698 77-80 DT denotes the
T699 81-85 NN denotes CD40
T700 86-95 NN denotes signaling
T701 96-103 NN denotes pathway
T1725 119-123 NN denotes CD40
T1726 124-133 NN denotes signaling
T1727 134-136 IN denotes in
T1728 137-149 JJ denotes professional
T1729 150-168 JJ denotes antigen-presenting
T1730 169-174 NN denotes cells
T1731 174-175 -COMMA- denotes ,
T1732 176-185 VB denotes including
T1733 186-187 NN denotes B
T1734 188-193 NN denotes cells
T1735 193-194 -COMMA- denotes ,
T1736 195-206 NN denotes macrophages
T1737 206-207 -COMMA- denotes ,
T1738 208-211 CC denotes and
T1739 212-221 JJ denotes dendritic
T1740 222-227 NN denotes cells
T1741 227-228 -COMMA- denotes ,
T1742 229-231 VB denotes is
T1743 232-240 JJ denotes critical
T1744 241-244 IN denotes for
T1745 245-248 DT denotes the
T1746 249-258 JJ denotes efficient
T1747 259-269 NN denotes activation
T1748 270-272 IN denotes of
T1749 273-280 JJ denotes humoral
T1750 281-284 CC denotes and
R599 T686 T687 arg1Of activation,and
R602 T688 T687 arg2Of signaling,and
R603 T690 T689 arg1Of results,These
R604 T690 T691 arg1Of results,reveal
R605 T691 T693 arg1Of reveal,as
R606 T692 T691 arg2Of HOIP,reveal
R607 T696 T693 arg2Of component,as
R608 T696 T694 arg1Of component,a
R609 T696 T695 arg1Of component,key
R610 T696 T697 arg1Of component,of
R611 T701 T697 arg2Of pathway,of
R612 T701 T698 arg1Of pathway,the
R613 T701 T699 arg1Of pathway,CD40
R614 T701 T700 arg1Of pathway,signaling
R1343 T1726 T1725 arg1Of signaling,CD40
R1344 T1726 T1727 arg1Of signaling,in
R1345 T1726 T1742 arg1Of signaling,is
R1346 T1726 T1743 arg1Of signaling,critical
R1347 T1730 T1727 arg2Of cells,in
R1348 T1730 T1728 arg1Of cells,professional
R1349 T1730 T1729 arg1Of cells,antigen-presenting
R1350 T1730 T1731 arg1Of cells,","
R1351 T1730 T1732 arg1Of cells,including
R1352 T1734 T1733 arg1Of cells,B
R1353 T1734 T1735 arg1Of cells,","
R1354 T1735 T1738 arg1Of ",",and
R1355 T1736 T1735 arg2Of macrophages,","
R1356 T1738 T1732 arg2Of and,including
R1357 T1738 T1737 arg1Of and,","
R1358 T1740 T1738 arg2Of cells,and
R1359 T1740 T1739 arg1Of cells,dendritic
R1360 T1742 T1741 arg1Of is,","
R1365 T1743 T1742 arg2Of critical,is
R1366 T1743 T1744 arg1Of critical,for
R1367 T1747 T1744 arg2Of activation,for
R1368 T1747 T1745 arg1Of activation,the
R1369 T1747 T1746 arg1Of activation,efficient
R1370 T1747 T1748 arg1Of activation,of
R1371 T1749 T1750 arg1Of humoral,and

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T407 3-13 NN denotes activation
T408 14-17 CC denotes and
T409 18-27 VBG denotes signaling
T410 27-28 . denotes .
T411 29-34 DT denotes These
T412 35-42 NNS denotes results
T413 43-49 VBP denotes reveal
T414 50-54 NNP denotes HOIP
T415 55-57 IN denotes as
T416 58-59 DT denotes a
T417 60-63 JJ denotes key
T418 64-73 NN denotes component
T419 74-76 IN denotes of
T420 77-80 DT denotes the
T421 81-85 NNP denotes CD40
T422 86-95 VBG denotes signaling
T423 96-103 NN denotes pathway
T424 103-104 . denotes .
T1199 119-123 CD denotes CD40
T1200 124-133 VBG denotes signaling
T1201 134-136 IN denotes in
T1202 137-149 JJ denotes professional
T1203 150-168 JJ denotes antigen-presenting
T1204 169-174 NNS denotes cells
T1205 174-175 , denotes ,
T1206 176-185 VBG denotes including
T1207 186-187 NNP denotes B
T1208 188-193 NNS denotes cells
T1209 193-194 , denotes ,
T1210 195-206 NNS denotes macrophages
T1211 206-207 , denotes ,
T1212 208-211 CC denotes and
T1213 212-221 JJ denotes dendritic
T1214 222-227 NNS denotes cells
T1215 227-228 , denotes ,
T1216 229-231 VBZ denotes is
T1217 232-240 JJ denotes critical
T1218 241-244 IN denotes for
T1219 245-248 DT denotes the
T1220 249-258 JJ denotes efficient
T1221 259-269 NN denotes activation
T1222 270-272 IN denotes of
T1223 273-280 JJ denotes humoral
T1224 281-284 CC denotes and
R330 T408 T407 cc and,activation
R331 T409 T407 conj signaling,activation
R333 T411 T412 det These,results
R334 T412 T413 nsubj results,reveal
R335 T413 T413 ROOT reveal,reveal
R336 T414 T413 dobj HOIP,reveal
R337 T415 T413 prep as,reveal
R338 T416 T418 det a,component
R339 T417 T418 amod key,component
R340 T418 T415 pobj component,as
R341 T419 T418 prep of,component
R342 T420 T421 det the,CD40
R343 T421 T419 pobj CD40,of
R344 T422 T413 advcl signaling,reveal
R345 T423 T422 dobj pathway,signaling
R346 T424 T413 punct .,reveal
R817 T1199 T1200 nummod CD40,signaling
R818 T1200 T1216 nsubj signaling,is
R819 T1201 T1200 prep in,signaling
R820 T1202 T1204 amod professional,cells
R821 T1203 T1204 amod antigen-presenting,cells
R822 T1204 T1201 pobj cells,in
R823 T1205 T1204 punct ",",cells
R824 T1206 T1204 prep including,cells
R825 T1207 T1208 compound B,cells
R826 T1208 T1206 pobj cells,including
R827 T1209 T1208 punct ",",cells
R828 T1210 T1208 conj macrophages,cells
R829 T1211 T1210 punct ",",macrophages
R830 T1212 T1210 cc and,macrophages
R831 T1213 T1214 amod dendritic,cells
R832 T1214 T1210 conj cells,macrophages
R833 T1215 T1216 punct ",",is
R834 T1216 T1216 ROOT is,is
R835 T1217 T1216 acomp critical,is
R836 T1218 T1217 prep for,critical
R837 T1219 T1221 det the,activation
R838 T1220 T1221 amod efficient,activation
R839 T1221 T1218 pobj activation,for
R840 T1222 T1221 prep of,activation
R842 T1224 T1223 cc and,humoral

GO-BP

Id Subject Object Predicate Lexical cue
T764 18-27 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T765 86-95 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T787 81-103 http://purl.obolibrary.org/obo/GO_0023035 denotes CD40 signaling pathway
T789 81-103 http://purl.obolibrary.org/obo/GO_2000348 denotes CD40 signaling pathway
T791 86-103 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathway
T2312 124-133 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling

GO-CC

Id Subject Object Predicate Lexical cue
T2413 169-174 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T2414 188-193 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T2415 222-227 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T134 29-104 Sentence denotes These results reveal HOIP as a key component of the CD40 signaling pathway.
T15 29-104 Sentence denotes These results reveal HOIP as a key component of the CD40 signaling pathway.
T16 106-118 Sentence denotes Introduction

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T738 50-54 Q96EP0 denotes HOIP
T739 81-85 P25942 denotes CD40
T2245 119-123 P25942 denotes CD40

test2

Id Subject Object Predicate Lexical cue
T79 50-54 Protein denotes HOIP
T80 81-85 Protein denotes CD40
T1049 119-123 Protein denotes CD40