PMC:3148254 / 1470-1658 JSONTXT

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    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T114","span":{"begin":143,"end":147},"obj":"Protein"},{"id":"T115","span":{"begin":148,"end":157},"obj":"Negative_regulation"}],"relations":[{"id":"R54","pred":"themeOf","subj":"T114","obj":"T115"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"diated activation of NF-κB and c-Jun kinase was impaired. Recruitment of IκB kinase proteins to the CD40 signaling complex was undetectable in HOIP-deficient cells, potentially explaining "}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T927","span":{"begin":21,"end":26},"obj":"Protein"},{"id":"T928","span":{"begin":31,"end":43},"obj":"Protein"},{"id":"T929","span":{"begin":7,"end":17},"obj":"Positive_regulation"},{"id":"T930","span":{"begin":7,"end":17},"obj":"Positive_regulation"},{"id":"T931","span":{"begin":48,"end":56},"obj":"Negative_regulation"},{"id":"T932","span":{"begin":48,"end":56},"obj":"Negative_regulation"},{"id":"T933","span":{"begin":73,"end":92},"obj":"Protein"},{"id":"T934","span":{"begin":100,"end":104},"obj":"Protein"},{"id":"T936","span":{"begin":58,"end":69},"obj":"Binding"}],"relations":[{"id":"R672","pred":"themeOf","subj":"T927","obj":"T929"},{"id":"R673","pred":"themeOf","subj":"T928","obj":"T930"},{"id":"R674","pred":"themeOf","subj":"T929","obj":"T931"},{"id":"R675","pred":"themeOf","subj":"T930","obj":"T932"},{"id":"R676","pred":"themeOf","subj":"T933","obj":"T936"},{"id":"R677","pred":"themeOf","subj":"T934","obj":"T936"}],"text":"diated activation of NF-κB and c-Jun kinase was impaired. Recruitment of IκB kinase proteins to the CD40 signaling complex was undetectable in HOIP-deficient cells, potentially explaining "}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T974","span":{"begin":143,"end":147},"obj":"Protein"},{"id":"T975","span":{"begin":148,"end":157},"obj":"Negative_regulation"}],"relations":[{"id":"R696","pred":"themeOf","subj":"T974","obj":"T975"}],"text":"diated activation of NF-κB and c-Jun kinase was impaired. Recruitment of IκB kinase proteins to the CD40 signaling complex was undetectable in HOIP-deficient cells, potentially explaining "}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T646","span":{"begin":7,"end":17},"obj":"NN"},{"id":"T647","span":{"begin":18,"end":20},"obj":"IN"},{"id":"T648","span":{"begin":21,"end":26},"obj":"NN"},{"id":"T649","span":{"begin":27,"end":30},"obj":"CC"},{"id":"T650","span":{"begin":31,"end":36},"obj":"NN"},{"id":"T651","span":{"begin":37,"end":43},"obj":"NN"},{"id":"T652","span":{"begin":44,"end":47},"obj":"VB"},{"id":"T653","span":{"begin":48,"end":56},"obj":"JJ"},{"id":"T654","span":{"begin":58,"end":69},"obj":"NN"},{"id":"T655","span":{"begin":70,"end":72},"obj":"IN"},{"id":"T656","span":{"begin":73,"end":76},"obj":"NN"},{"id":"T657","span":{"begin":77,"end":83},"obj":"NN"},{"id":"T658","span":{"begin":84,"end":92},"obj":"NN"},{"id":"T659","span":{"begin":93,"end":95},"obj":"TO"},{"id":"T660","span":{"begin":96,"end":99},"obj":"DT"},{"id":"T661","span":{"begin":100,"end":104},"obj":"NN"},{"id":"T662","span":{"begin":105,"end":114},"obj":"NN"},{"id":"T663","span":{"begin":115,"end":122},"obj":"NN"},{"id":"T664","span":{"begin":123,"end":126},"obj":"VB"},{"id":"T665","span":{"begin":127,"end":139},"obj":"JJ"},{"id":"T666","span":{"begin":140,"end":142},"obj":"IN"},{"id":"T667","span":{"begin":143,"end":157},"obj":"JJ"},{"id":"T668","span":{"begin":158,"end":163},"obj":"NN"},{"id":"T669","span":{"begin":163,"end":164},"obj":"-COMMA-"},{"id":"T670","span":{"begin":165,"end":176},"obj":"RB"},{"id":"T671","span":{"begin":177,"end":187},"obj":"VB"}],"relations":[{"id":"R561","pred":"arg1Of","subj":"T646","obj":"T647"},{"id":"R562","pred":"arg1Of","subj":"T646","obj":"T652"},{"id":"R563","pred":"arg1Of","subj":"T646","obj":"T653"},{"id":"R564","pred":"arg1Of","subj":"T648","obj":"T649"},{"id":"R565","pred":"arg2Of","subj":"T650","obj":"T649"},{"id":"R566","pred":"arg2Of","subj":"T651","obj":"T647"},{"id":"R567","pred":"arg1Of","subj":"T651","obj":"T648"},{"id":"R568","pred":"arg1Of","subj":"T651","obj":"T650"},{"id":"R571","pred":"arg2Of","subj":"T653","obj":"T652"},{"id":"R572","pred":"arg1Of","subj":"T654","obj":"T655"},{"id":"R573","pred":"arg1Of","subj":"T654","obj":"T659"},{"id":"R574","pred":"arg1Of","subj":"T654","obj":"T664"},{"id":"R575","pred":"arg1Of","subj":"T654","obj":"T665"},{"id":"R576","pred":"arg2Of","subj":"T658","obj":"T655"},{"id":"R577","pred":"arg1Of","subj":"T658","obj":"T656"},{"id":"R578","pred":"arg1Of","subj":"T658","obj":"T657"},{"id":"R579","pred":"arg2Of","subj":"T663","obj":"T659"},{"id":"R580","pred":"arg1Of","subj":"T663","obj":"T660"},{"id":"R581","pred":"arg1Of","subj":"T663","obj":"T661"},{"id":"R582","pred":"arg1Of","subj":"T663","obj":"T662"},{"id":"R583","pred":"arg1Of","subj":"T664","obj":"T666"},{"id":"R584","pred":"arg1Of","subj":"T664","obj":"T669"},{"id":"R585","pred":"arg2Of","subj":"T665","obj":"T664"},{"id":"R586","pred":"arg2Of","subj":"T668","obj":"T666"},{"id":"R587","pred":"arg1Of","subj":"T668","obj":"T667"},{"id":"R588","pred":"arg3Of","subj":"T671","obj":"T664"},{"id":"R589","pred":"arg1Of","subj":"T671","obj":"T670"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"diated activation of NF-κB and c-Jun kinase was impaired. Recruitment of IκB kinase proteins to the CD40 signaling complex was undetectable in HOIP-deficient cells, potentially explaining "}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T365","span":{"begin":7,"end":17},"obj":"NN"},{"id":"T366","span":{"begin":18,"end":20},"obj":"IN"},{"id":"T367","span":{"begin":21,"end":26},"obj":"NN"},{"id":"T368","span":{"begin":27,"end":30},"obj":"CC"},{"id":"T369","span":{"begin":31,"end":36},"obj":"JJ"},{"id":"T370","span":{"begin":37,"end":43},"obj":"NN"},{"id":"T371","span":{"begin":44,"end":47},"obj":"VBD"},{"id":"T372","span":{"begin":48,"end":56},"obj":"VBN"},{"id":"T373","span":{"begin":56,"end":57},"obj":"."},{"id":"T374","span":{"begin":58,"end":69},"obj":"NN"},{"id":"T375","span":{"begin":70,"end":72},"obj":"IN"},{"id":"T376","span":{"begin":73,"end":76},"obj":"NNP"},{"id":"T377","span":{"begin":77,"end":83},"obj":"NN"},{"id":"T378","span":{"begin":84,"end":92},"obj":"NNS"},{"id":"T379","span":{"begin":93,"end":95},"obj":"TO"},{"id":"T380","span":{"begin":96,"end":99},"obj":"DT"},{"id":"T381","span":{"begin":100,"end":104},"obj":"NNP"},{"id":"T382","span":{"begin":105,"end":114},"obj":"VBG"},{"id":"T383","span":{"begin":115,"end":122},"obj":"NN"},{"id":"T384","span":{"begin":123,"end":126},"obj":"VBD"},{"id":"T385","span":{"begin":127,"end":139},"obj":"JJ"},{"id":"T386","span":{"begin":140,"end":142},"obj":"IN"},{"id":"T387","span":{"begin":143,"end":157},"obj":"JJ"},{"id":"T388","span":{"begin":158,"end":163},"obj":"NNS"},{"id":"T389","span":{"begin":163,"end":164},"obj":","},{"id":"T390","span":{"begin":165,"end":176},"obj":"RB"},{"id":"T391","span":{"begin":177,"end":187},"obj":"VBG"}],"relations":[{"id":"R287","pred":"nsubjpass","subj":"T365","obj":"T372"},{"id":"R288","pred":"prep","subj":"T366","obj":"T365"},{"id":"R289","pred":"pobj","subj":"T367","obj":"T366"},{"id":"R290","pred":"cc","subj":"T368","obj":"T367"},{"id":"R291","pred":"amod","subj":"T369","obj":"T370"},{"id":"R292","pred":"conj","subj":"T370","obj":"T367"},{"id":"R293","pred":"auxpass","subj":"T371","obj":"T372"},{"id":"R296","pred":"nsubj","subj":"T374","obj":"T384"},{"id":"R297","pred":"prep","subj":"T375","obj":"T374"},{"id":"R298","pred":"compound","subj":"T376","obj":"T378"},{"id":"R299","pred":"compound","subj":"T377","obj":"T378"},{"id":"R300","pred":"pobj","subj":"T378","obj":"T375"},{"id":"R301","pred":"prep","subj":"T379","obj":"T374"},{"id":"R302","pred":"det","subj":"T380","obj":"T381"},{"id":"R303","pred":"pobj","subj":"T381","obj":"T379"},{"id":"R304","pred":"compound","subj":"T382","obj":"T383"},{"id":"R305","pred":"nsubj","subj":"T383","obj":"T384"},{"id":"R306","pred":"ROOT","subj":"T384","obj":"T384"},{"id":"R307","pred":"acomp","subj":"T385","obj":"T384"},{"id":"R308","pred":"prep","subj":"T386","obj":"T385"},{"id":"R309","pred":"amod","subj":"T387","obj":"T388"},{"id":"R310","pred":"pobj","subj":"T388","obj":"T386"},{"id":"R311","pred":"punct","subj":"T389","obj":"T384"},{"id":"R312","pred":"advmod","subj":"T390","obj":"T391"},{"id":"R313","pred":"advcl","subj":"T391","obj":"T384"}],"text":"diated activation of NF-κB and c-Jun kinase was impaired. Recruitment of IκB kinase proteins to the CD40 signaling complex was undetectable in HOIP-deficient cells, potentially explaining "}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T763","span":{"begin":105,"end":114},"obj":"http://purl.obolibrary.org/obo/GO_0023052"},{"id":"T780","span":{"begin":7,"end":26},"obj":"http://purl.obolibrary.org/obo/GO_0051092"}],"text":"diated activation of NF-κB and c-Jun kinase was impaired. Recruitment of IκB kinase proteins to the CD40 signaling complex was undetectable in HOIP-deficient cells, potentially explaining "}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T805","span":{"begin":158,"end":163},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"diated activation of NF-κB and c-Jun kinase was impaired. Recruitment of IκB kinase proteins to the CD40 signaling complex was undetectable in HOIP-deficient cells, potentially explaining "}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T731","span":{"begin":31,"end":36},"obj":"P05412"},{"id":"T732","span":{"begin":33,"end":36},"obj":"P05412"},{"id":"T733","span":{"begin":73,"end":83},"obj":"Q60680-2"},{"id":"T734","span":{"begin":73,"end":83},"obj":"O15111"},{"id":"T735","span":{"begin":100,"end":104},"obj":"P25942"},{"id":"T736","span":{"begin":143,"end":147},"obj":"Q96EP0"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"diated activation of NF-κB and c-Jun kinase was impaired. Recruitment of IκB kinase proteins to the CD40 signaling complex was undetectable in HOIP-deficient cells, potentially explaining "}

    test2

    {"project":"test2","denotations":[{"id":"T75","span":{"begin":143,"end":147},"obj":"Protein"},{"id":"T76","span":{"begin":148,"end":157},"obj":"Negative_regulation"}],"relations":[{"id":"R36","pred":"themeOf","subj":"T75","obj":"T76"}],"text":"diated activation of NF-κB and c-Jun kinase was impaired. Recruitment of IκB kinase proteins to the CD40 signaling complex was undetectable in HOIP-deficient cells, potentially explaining "}