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PMC:3148254 / 1338-1484 JSONTXT

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bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T110 67-76 Negative_regulation denotes defective
T111 80-84 Protein denotes HOIP
T112 85-94 Negative_regulation denotes deficient
T113 125-129 Protein denotes CD40
R53 T111 T112 themeOf HOIP,deficient

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T923 16-39 Protein denotes germline immunoglobulin
T924 48-61 Transcription denotes transcription
T925 2-12 Positive_regulation denotes activation
T926 125-129 Protein denotes CD40
R668 T923 T924 themeOf germline immunoglobulin,transcription
R669 T924 T925 themeOf transcription,activation

events-check-again

Id Subject Object Predicate Lexical cue
T970 67-76 Negative_regulation denotes defective
T971 80-84 Protein denotes HOIP
T972 85-94 Negative_regulation denotes deficient
T973 125-129 Protein denotes CD40
R695 T971 T972 themeOf HOIP,deficient

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T629 2-12 NN denotes activation
T630 13-15 IN denotes of
T631 16-24 NN denotes germline
T632 25-39 NN denotes immunoglobulin
T633 40-47 NN denotes epsilon
T634 48-61 NN denotes transcription
T635 62-66 VB denotes were
T636 67-76 JJ denotes defective
T637 77-79 IN denotes in
T638 80-94 JJ denotes HOIP-deficient
T639 95-100 NN denotes cells
T640 102-104 PRP denotes We
T641 105-109 RB denotes also
T642 110-115 VB denotes found
T643 116-120 IN denotes that
T644 121-124 DT denotes the
T645 125-138 JJ denotes CD40-mediated
R546 T629 T630 arg1Of activation,of
R547 T634 T630 arg2Of transcription,of
R548 T634 T631 arg1Of transcription,germline
R549 T634 T632 arg1Of transcription,immunoglobulin
R550 T634 T633 arg1Of transcription,epsilon
R553 T635 T637 arg1Of were,in
R554 T636 T635 arg2Of defective,were
R555 T639 T637 arg2Of cells,in
R556 T639 T638 arg1Of cells,HOIP-deficient
R557 T640 T642 arg1Of We,found
R558 T642 T641 arg1Of found,also

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T347 2-12 NN denotes activation
T348 13-15 IN denotes of
T349 16-24 NN denotes germline
T350 25-39 NN denotes immunoglobulin
T351 40-47 NN denotes epsilon
T352 48-61 NN denotes transcription
T353 62-66 VBD denotes were
T354 67-76 JJ denotes defective
T355 77-79 IN denotes in
T356 80-94 JJ denotes HOIP-deficient
T357 95-100 NNS denotes cells
T358 100-101 . denotes .
T359 102-104 PRP denotes We
T360 105-109 RB denotes also
T361 110-115 VBD denotes found
T362 116-120 IN denotes that
T363 121-124 DT denotes the
T364 125-138 JJ denotes CD40-mediated
R270 T348 T347 prep of,activation
R271 T349 T352 nmod germline,transcription
R272 T350 T352 compound immunoglobulin,transcription
R273 T351 T352 compound epsilon,transcription
R274 T352 T348 pobj transcription,of
R276 T354 T353 acomp defective,were
R277 T355 T354 prep in,defective
R278 T356 T357 amod HOIP-deficient,cells
R279 T357 T355 pobj cells,in
R281 T359 T361 nsubj We,found
R282 T360 T361 advmod also,found
R283 T361 T361 ROOT found,found

GO-BP

Id Subject Object Predicate Lexical cue
T792 48-61 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription

GO-MF

Id Subject Object Predicate Lexical cue
T796 25-39 http://purl.obolibrary.org/obo/GO_0003823 denotes immunoglobulin

GO-CC

Id Subject Object Predicate Lexical cue
T804 95-100 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T729 80-84 Q96EP0 denotes HOIP
T730 125-129 P25942 denotes CD40

test2

Id Subject Object Predicate Lexical cue
T70 2-12 Positive_regulation denotes activation
T71 48-61 Transcription denotes transcription
T72 80-84 Protein denotes HOIP
T73 85-94 Negative_regulation denotes deficient
T74 125-129 Protein denotes CD40
R34 T71 T70 themeOf transcription,activation
R35 T72 T73 themeOf HOIP,deficient