PMC:3148254 / 13177-13372 JSONTXT

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    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T5473","span":{"begin":157,"end":168},"obj":"Regulation"},{"id":"T5474","span":{"begin":173,"end":185},"obj":"Negative_regulation"}],"relations":[{"id":"R4187","pred":"themeOf","subj":"T5474","obj":"T5473"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"ion of the canonical NF-κB pathway is initiated with the phosphorylation of IκB proteins by the IκB kinase complex (IKK). In resting cells, IκB proteins are responsible for sequestering NF-κB sub"}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T6239","span":{"begin":21,"end":26},"obj":"Protein"},{"id":"T6240","span":{"begin":76,"end":88},"obj":"Protein"},{"id":"T6241","span":{"begin":96,"end":114},"obj":"Protein"},{"id":"T6242","span":{"begin":116,"end":119},"obj":"Protein"},{"id":"T6244","span":{"begin":57,"end":72},"obj":"Phosphorylation"},{"id":"T6245","span":{"begin":57,"end":72},"obj":"Phosphorylation"},{"id":"T6246","span":{"begin":57,"end":72},"obj":"Phosphorylation"},{"id":"T6247","span":{"begin":140,"end":152},"obj":"Protein"},{"id":"T6249","span":{"begin":173,"end":185},"obj":"Positive_regulation"}],"relations":[{"id":"R4795","pred":"themeOf","subj":"T6240","obj":"T6244"},{"id":"R4796","pred":"themeOf","subj":"T6241","obj":"T6245"},{"id":"R4797","pred":"themeOf","subj":"T6242","obj":"T6246"},{"id":"R4798","pred":"causeOf","subj":"T6247","obj":"T6249"}],"text":"ion of the canonical NF-κB pathway is initiated with the phosphorylation of IκB proteins by the IκB kinase complex (IKK). In resting cells, IκB proteins are responsible for sequestering NF-κB sub"}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T6297","span":{"begin":157,"end":168},"obj":"Regulation"},{"id":"T6298","span":{"begin":173,"end":185},"obj":"Negative_regulation"}],"relations":[{"id":"R4827","pred":"themeOf","subj":"T6298","obj":"T6297"}],"text":"ion of the canonical NF-κB pathway is initiated with the phosphorylation of IκB proteins by the IκB kinase complex (IKK). In resting cells, IκB proteins are responsible for sequestering NF-κB sub"}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T5907","span":{"begin":4,"end":6},"obj":"IN"},{"id":"T5908","span":{"begin":7,"end":10},"obj":"DT"},{"id":"T5909","span":{"begin":11,"end":20},"obj":"JJ"},{"id":"T5910","span":{"begin":21,"end":26},"obj":"NN"},{"id":"T5911","span":{"begin":27,"end":34},"obj":"NN"},{"id":"T5912","span":{"begin":35,"end":37},"obj":"VB"},{"id":"T5913","span":{"begin":38,"end":47},"obj":"VB"},{"id":"T5914","span":{"begin":48,"end":52},"obj":"IN"},{"id":"T5915","span":{"begin":53,"end":56},"obj":"DT"},{"id":"T5916","span":{"begin":57,"end":72},"obj":"NN"},{"id":"T5917","span":{"begin":73,"end":75},"obj":"IN"},{"id":"T5918","span":{"begin":76,"end":79},"obj":"NN"},{"id":"T5919","span":{"begin":80,"end":88},"obj":"NN"},{"id":"T5920","span":{"begin":89,"end":91},"obj":"IN"},{"id":"T5921","span":{"begin":92,"end":95},"obj":"DT"},{"id":"T5922","span":{"begin":96,"end":99},"obj":"NN"},{"id":"T5923","span":{"begin":100,"end":106},"obj":"NN"},{"id":"T5924","span":{"begin":107,"end":114},"obj":"NN"},{"id":"T5925","span":{"begin":115,"end":116},"obj":"-LRB-"},{"id":"T5926","span":{"begin":116,"end":119},"obj":"NN"},{"id":"T5927","span":{"begin":119,"end":120},"obj":"-RRB-"},{"id":"T5928","span":{"begin":122,"end":124},"obj":"IN"},{"id":"T5929","span":{"begin":125,"end":132},"obj":"VB"},{"id":"T5930","span":{"begin":133,"end":138},"obj":"NN"},{"id":"T5931","span":{"begin":138,"end":139},"obj":"-COMMA-"},{"id":"T5932","span":{"begin":140,"end":143},"obj":"NN"},{"id":"T5933","span":{"begin":144,"end":152},"obj":"NN"},{"id":"T5934","span":{"begin":153,"end":156},"obj":"VB"},{"id":"T5935","span":{"begin":157,"end":168},"obj":"JJ"},{"id":"T5936","span":{"begin":169,"end":172},"obj":"IN"},{"id":"T5937","span":{"begin":173,"end":185},"obj":"VB"},{"id":"T5938","span":{"begin":186,"end":191},"obj":"NN"}],"relations":[{"id":"R4602","pred":"arg2Of","subj":"T5911","obj":"T5907"},{"id":"R4603","pred":"arg1Of","subj":"T5911","obj":"T5908"},{"id":"R4604","pred":"arg1Of","subj":"T5911","obj":"T5909"},{"id":"R4605","pred":"arg1Of","subj":"T5911","obj":"T5910"},{"id":"R4606","pred":"arg2Of","subj":"T5913","obj":"T5912"},{"id":"R4607","pred":"arg1Of","subj":"T5913","obj":"T5914"},{"id":"R4608","pred":"arg2Of","subj":"T5916","obj":"T5914"},{"id":"R4609","pred":"arg1Of","subj":"T5916","obj":"T5915"},{"id":"R4610","pred":"arg1Of","subj":"T5916","obj":"T5917"},{"id":"R4611","pred":"arg1Of","subj":"T5916","obj":"T5920"},{"id":"R4612","pred":"arg2Of","subj":"T5919","obj":"T5917"},{"id":"R4613","pred":"arg1Of","subj":"T5919","obj":"T5918"},{"id":"R4614","pred":"arg2Of","subj":"T5924","obj":"T5920"},{"id":"R4615","pred":"arg1Of","subj":"T5924","obj":"T5921"},{"id":"R4616","pred":"arg1Of","subj":"T5924","obj":"T5922"},{"id":"R4617","pred":"arg1Of","subj":"T5924","obj":"T5923"},{"id":"R4618","pred":"arg1Of","subj":"T5924","obj":"T5925"},{"id":"R4619","pred":"arg2Of","subj":"T5926","obj":"T5925"},{"id":"R4620","pred":"arg3Of","subj":"T5927","obj":"T5925"},{"id":"R4621","pred":"arg2Of","subj":"T5930","obj":"T5928"},{"id":"R4622","pred":"arg1Of","subj":"T5930","obj":"T5929"},{"id":"R4623","pred":"arg1Of","subj":"T5933","obj":"T5932"},{"id":"R4624","pred":"arg1Of","subj":"T5933","obj":"T5934"},{"id":"R4625","pred":"arg1Of","subj":"T5933","obj":"T5935"},{"id":"R4626","pred":"arg1Of","subj":"T5934","obj":"T5928"},{"id":"R4627","pred":"arg1Of","subj":"T5934","obj":"T5931"},{"id":"R4628","pred":"arg2Of","subj":"T5935","obj":"T5934"},{"id":"R4629","pred":"arg1Of","subj":"T5935","obj":"T5936"},{"id":"R4630","pred":"arg2Of","subj":"T5937","obj":"T5936"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"ion of the canonical NF-κB pathway is initiated with the phosphorylation of IκB proteins by the IκB kinase complex (IKK). In resting cells, IκB proteins are responsible for sequestering NF-κB sub"}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T5632","span":{"begin":4,"end":6},"obj":"IN"},{"id":"T5633","span":{"begin":7,"end":10},"obj":"DT"},{"id":"T5634","span":{"begin":11,"end":20},"obj":"JJ"},{"id":"T5635","span":{"begin":21,"end":26},"obj":"NN"},{"id":"T5636","span":{"begin":27,"end":34},"obj":"NN"},{"id":"T5637","span":{"begin":35,"end":37},"obj":"VBZ"},{"id":"T5638","span":{"begin":38,"end":47},"obj":"VBN"},{"id":"T5639","span":{"begin":48,"end":52},"obj":"IN"},{"id":"T5640","span":{"begin":53,"end":56},"obj":"DT"},{"id":"T5641","span":{"begin":57,"end":72},"obj":"NN"},{"id":"T5642","span":{"begin":73,"end":75},"obj":"IN"},{"id":"T5643","span":{"begin":76,"end":79},"obj":"NNP"},{"id":"T5644","span":{"begin":80,"end":88},"obj":"NNS"},{"id":"T5645","span":{"begin":89,"end":91},"obj":"IN"},{"id":"T5646","span":{"begin":92,"end":95},"obj":"DT"},{"id":"T5647","span":{"begin":96,"end":99},"obj":"NNP"},{"id":"T5648","span":{"begin":100,"end":106},"obj":"NN"},{"id":"T5649","span":{"begin":107,"end":114},"obj":"NN"},{"id":"T5650","span":{"begin":115,"end":116},"obj":"-LRB-"},{"id":"T5651","span":{"begin":116,"end":119},"obj":"NNP"},{"id":"T5652","span":{"begin":119,"end":120},"obj":"-RRB-"},{"id":"T5653","span":{"begin":120,"end":121},"obj":"."},{"id":"T5654","span":{"begin":122,"end":124},"obj":"IN"},{"id":"T5655","span":{"begin":125,"end":132},"obj":"VBG"},{"id":"T5656","span":{"begin":133,"end":138},"obj":"NNS"},{"id":"T5657","span":{"begin":138,"end":139},"obj":","},{"id":"T5658","span":{"begin":140,"end":143},"obj":"NNP"},{"id":"T5659","span":{"begin":144,"end":152},"obj":"NNS"},{"id":"T5660","span":{"begin":153,"end":156},"obj":"VBP"},{"id":"T5661","span":{"begin":157,"end":168},"obj":"JJ"},{"id":"T5662","span":{"begin":169,"end":172},"obj":"IN"},{"id":"T5663","span":{"begin":173,"end":185},"obj":"NN"},{"id":"T5664","span":{"begin":186,"end":191},"obj":"NN"}],"relations":[{"id":"R4327","pred":"det","subj":"T5633","obj":"T5636"},{"id":"R4328","pred":"amod","subj":"T5634","obj":"T5636"},{"id":"R4329","pred":"compound","subj":"T5635","obj":"T5636"},{"id":"R4330","pred":"pobj","subj":"T5636","obj":"T5632"},{"id":"R4331","pred":"auxpass","subj":"T5637","obj":"T5638"},{"id":"R4332","pred":"ROOT","subj":"T5638","obj":"T5638"},{"id":"R4333","pred":"prep","subj":"T5639","obj":"T5638"},{"id":"R4334","pred":"det","subj":"T5640","obj":"T5641"},{"id":"R4335","pred":"pobj","subj":"T5641","obj":"T5639"},{"id":"R4336","pred":"prep","subj":"T5642","obj":"T5641"},{"id":"R4337","pred":"compound","subj":"T5643","obj":"T5644"},{"id":"R4338","pred":"pobj","subj":"T5644","obj":"T5642"},{"id":"R4339","pred":"prep","subj":"T5645","obj":"T5641"},{"id":"R4340","pred":"det","subj":"T5646","obj":"T5649"},{"id":"R4341","pred":"nmod","subj":"T5647","obj":"T5649"},{"id":"R4342","pred":"compound","subj":"T5648","obj":"T5649"},{"id":"R4343","pred":"pobj","subj":"T5649","obj":"T5645"},{"id":"R4344","pred":"punct","subj":"T5650","obj":"T5651"},{"id":"R4345","pred":"appos","subj":"T5651","obj":"T5649"},{"id":"R4346","pred":"punct","subj":"T5652","obj":"T5651"},{"id":"R4347","pred":"punct","subj":"T5653","obj":"T5638"},{"id":"R4348","pred":"prep","subj":"T5654","obj":"T5660"},{"id":"R4349","pred":"amod","subj":"T5655","obj":"T5656"},{"id":"R4350","pred":"pobj","subj":"T5656","obj":"T5654"},{"id":"R4351","pred":"punct","subj":"T5657","obj":"T5660"},{"id":"R4352","pred":"compound","subj":"T5658","obj":"T5659"},{"id":"R4353","pred":"nsubj","subj":"T5659","obj":"T5660"},{"id":"R4354","pred":"ROOT","subj":"T5660","obj":"T5660"},{"id":"R4355","pred":"acomp","subj":"T5661","obj":"T5660"},{"id":"R4356","pred":"prep","subj":"T5662","obj":"T5661"}],"text":"ion of the canonical NF-κB pathway is initiated with the phosphorylation of IκB proteins by the IκB kinase complex (IKK). In resting cells, IκB proteins are responsible for sequestering NF-κB sub"}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T6108","span":{"begin":57,"end":72},"obj":"http://purl.obolibrary.org/obo/GO_0016310"},{"id":"T6111","span":{"begin":57,"end":79},"obj":"http://purl.obolibrary.org/obo/GO_0007252"},{"id":"T6112","span":{"begin":116,"end":119},"obj":"http://purl.obolibrary.org/obo/GO_0008384"},{"id":"T6114","span":{"begin":173,"end":185},"obj":"http://purl.obolibrary.org/obo/GO_0051235"}],"text":"ion of the canonical NF-κB pathway is initiated with the phosphorylation of IκB proteins by the IκB kinase complex (IKK). In resting cells, IκB proteins are responsible for sequestering NF-κB sub"}

    GO-MF

    {"project":"GO-MF","denotations":[{"id":"T6131","span":{"begin":116,"end":119},"obj":"http://purl.obolibrary.org/obo/GO_0008384"}],"text":"ion of the canonical NF-κB pathway is initiated with the phosphorylation of IκB proteins by the IκB kinase complex (IKK). In resting cells, IκB proteins are responsible for sequestering NF-κB sub"}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T6146","span":{"begin":107,"end":119},"obj":"http://purl.obolibrary.org/obo/GO_0008385"},{"id":"T6137","span":{"begin":133,"end":138},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"ion of the canonical NF-κB pathway is initiated with the phosphorylation of IκB proteins by the IκB kinase complex (IKK). In resting cells, IκB proteins are responsible for sequestering NF-κB sub"}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T6069","span":{"begin":96,"end":106},"obj":"O15111"},{"id":"T6070","span":{"begin":96,"end":106},"obj":"Q60680-2"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"ion of the canonical NF-κB pathway is initiated with the phosphorylation of IκB proteins by the IκB kinase complex (IKK). In resting cells, IκB proteins are responsible for sequestering NF-κB sub"}