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PMC:3148254 / 12381-12507 JSONTXT

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bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T5461 105-109 Protein denotes HOIP
T5462 119-123 Protein denotes CD40
T15734 82-86 Protein denotes HOIP
T15735 87-96 Negative_regulation denotes deficient
R12428 T15734 T15735 themeOf HOIP,deficient

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T6220 119-123 Protein denotes CD40
T6224 110-118 Positive_regulation denotes mediates

events-check-again

Id Subject Object Predicate Lexical cue
T6285 105-109 Protein denotes HOIP
T6286 119-123 Protein denotes CD40
T16118 82-86 Protein denotes HOIP
T16119 87-96 Negative_regulation denotes deficient
R12734 T16118 T16119 themeOf HOIP,deficient

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T5789 105-109 NN denotes HOIP
T5790 110-118 VB denotes mediates
T16005 4-12 VB denotes obtained
T16006 13-15 IN denotes in
T16007 16-17 DT denotes a
T16008 18-24 JJ denotes second
T16009 25-35 NN denotes experiment
T16010 36-39 CC denotes and
T16011 40-42 IN denotes in
T16012 43-45 DT denotes an
T16013 46-56 JJ denotes additional
T16014 57-67 NN denotes experiment
T16015 68-72 IN denotes with
T16016 73-74 DT denotes a
T16017 75-81 JJ denotes second
T16018 82-96 JJ denotes HOIP-deficient
T16019 97-102 NN denotes clone
R4483 T5789 T5790 arg1Of HOIP,mediates
R12696 T16005 T16006 arg1Of obtained,in
R12697 T16005 T16011 arg1Of obtained,in
R12698 T16005 T16015 arg1Of obtained,with
R12699 T16006 T16010 arg1Of in,and
R12700 T16009 T16006 arg2Of experiment,in
R12701 T16009 T16007 arg1Of experiment,a
R12702 T16009 T16008 arg1Of experiment,second
R12703 T16011 T16010 arg2Of in,and
R12704 T16014 T16011 arg2Of experiment,in
R12705 T16014 T16012 arg1Of experiment,an
R12706 T16014 T16013 arg1Of experiment,additional
R12707 T16019 T16015 arg2Of clone,with
R12708 T16019 T16016 arg1Of clone,a
R12709 T16019 T16017 arg1Of clone,second
R12710 T16019 T16018 arg1Of clone,HOIP-deficient

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T5508 105-109 NNP denotes HOIP
T5509 110-118 VBZ denotes mediates
T15873 4-12 VBN denotes obtained
T15874 13-15 IN denotes in
T15875 16-17 DT denotes a
T15876 18-24 JJ denotes second
T15877 25-35 NN denotes experiment
T15878 36-39 CC denotes and
T15879 40-42 IN denotes in
T15880 43-45 DT denotes an
T15881 46-56 JJ denotes additional
T15882 57-67 NN denotes experiment
T15883 68-72 IN denotes with
T15884 73-74 DT denotes a
T15885 75-81 JJ denotes second
T15886 82-96 JJ denotes HOIP-deficient
T15887 97-102 NN denotes clone
T15888 102-103 . denotes .
R4202 T5508 T5509 nsubj HOIP,mediates
R4203 T5509 T5509 ROOT mediates,mediates
R12560 T15873 T15873 ROOT obtained,obtained
R12561 T15874 T15873 prep in,obtained
R12562 T15875 T15877 det a,experiment
R12563 T15876 T15877 amod second,experiment
R12564 T15877 T15874 pobj experiment,in
R12565 T15878 T15874 cc and,in
R12566 T15879 T15874 conj in,in
R12567 T15880 T15882 det an,experiment
R12568 T15881 T15882 amod additional,experiment
R12569 T15882 T15879 pobj experiment,in
R12570 T15883 T15882 prep with,experiment
R12571 T15884 T15887 det a,clone
R12572 T15885 T15887 amod second,clone
R12573 T15886 T15887 amod HOIP-deficient,clone
R12574 T15887 T15883 pobj clone,with
R12575 T15888 T15873 punct .,obtained

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T6055 105-109 Q96EP0 denotes HOIP
T6056 119-123 P25942 denotes CD40
T16034 82-86 Q96EP0 denotes HOIP

test2

Id Subject Object Predicate Lexical cue
T5423 105-109 Protein denotes HOIP
T5424 119-123 Protein denotes CD40
T15713 82-86 Protein denotes HOIP
T15714 87-96 Negative_regulation denotes deficient
R12420 T15713 T15714 themeOf HOIP,deficient