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PMC:3148254 / 114-377 JSONTXT

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bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T84 1-5 Protein denotes CD40
T85 150-160 Binding denotes engagement
T86 164-168 Protein denotes CD40
T87 176-182 Protein denotes ligand
T88 183-188 Protein denotes CD154
R39 T86 T85 themeOf CD40,engagement
R40 T88 T85 themeOf CD154,engagement

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T893 1-5 Protein denotes CD40
T894 164-168 Protein denotes CD40
T895 183-188 Protein denotes CD154
T896 150-160 Binding denotes engagement
R653 T894 T896 themeOf CD40,engagement

events-check-again

Id Subject Object Predicate Lexical cue
T944 1-5 Protein denotes CD40
T945 150-160 Binding denotes engagement
T946 164-168 Protein denotes CD40
T947 176-182 Protein denotes ligand
T948 183-188 Protein denotes CD154
R681 T946 T945 themeOf CD40,engagement
R682 T948 T945 themeOf CD154,engagement

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T436 1-5 NN denotes CD40
T437 6-8 VB denotes is
T438 9-10 DT denotes a
T439 11-15 NN denotes cell
T440 16-23 NN denotes surface
T441 24-32 NN denotes receptor
T442 33-42 JJ denotes important
T443 43-45 IN denotes in
T444 46-49 DT denotes the
T445 50-60 NN denotes activation
T446 61-63 IN denotes of
T447 64-82 JJ denotes antigen-presenting
T448 83-88 NN denotes cells
T449 89-95 IN denotes during
T450 96-102 JJ denotes immune
T451 103-112 NN denotes responses
T452 114-116 IN denotes In
T453 117-128 NN denotes macrophages
T454 129-132 CC denotes and
T455 133-142 JJ denotes dendritic
T456 143-148 NN denotes cells
T457 148-149 -COMMA- denotes ,
T458 150-160 NN denotes engagement
T459 161-163 IN denotes of
T460 164-168 NN denotes CD40
T461 169-171 IN denotes by
T462 172-175 PRP-DOLLAR- denotes its
T463 176-182 NN denotes ligand
T464 183-188 NN denotes CD154
T465 189-197 VB denotes provides
T466 198-205 NN denotes signals
T467 206-214 JJ denotes critical
T468 215-218 IN denotes for
T469 219-233 JJ denotes anti-microbial
T470 234-237 CC denotes and
T471 238-239 NN denotes T
T472 240-253 JJ denotes cell-mediated
T473 254-260 JJ denotes immune
R358 T436 T437 arg1Of CD40,is
R359 T441 T437 arg2Of receptor,is
R360 T441 T438 arg1Of receptor,a
R361 T441 T439 arg1Of receptor,cell
R362 T441 T440 arg1Of receptor,surface
R363 T441 T442 arg1Of receptor,important
R364 T442 T443 arg1Of important,in
R365 T445 T443 arg2Of activation,in
R366 T445 T444 arg1Of activation,the
R367 T445 T446 arg1Of activation,of
R368 T445 T449 arg1Of activation,during
R369 T448 T446 arg2Of cells,of
R370 T448 T447 arg1Of cells,antigen-presenting
R371 T451 T449 arg2Of responses,during
R372 T451 T450 arg1Of responses,immune
R373 T453 T454 arg1Of macrophages,and
R374 T454 T452 arg2Of and,In
R375 T456 T454 arg2Of cells,and
R376 T456 T455 arg1Of cells,dendritic
R377 T458 T459 arg1Of engagement,of
R378 T458 T461 arg1Of engagement,by
R379 T458 T465 arg1Of engagement,provides
R380 T460 T459 arg2Of CD40,of
R381 T464 T461 arg2Of CD154,by
R382 T464 T462 arg1Of CD154,its
R383 T464 T463 arg1Of CD154,ligand
R384 T465 T452 arg1Of provides,In
R385 T465 T457 arg1Of provides,","
R388 T466 T465 arg2Of signals,provides
R389 T466 T467 arg1Of signals,critical
R390 T467 T468 arg1Of critical,for
R391 T469 T470 arg1Of anti-microbial,and
R392 T472 T470 arg2Of cell-mediated,and
R393 T472 T471 arg1Of cell-mediated,T

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T146 1-5 NNP denotes CD40
T147 6-8 VBZ denotes is
T148 9-10 DT denotes a
T149 11-15 NN denotes cell
T150 16-23 NN denotes surface
T151 24-32 NN denotes receptor
T152 33-42 JJ denotes important
T153 43-45 IN denotes in
T154 46-49 DT denotes the
T155 50-60 NN denotes activation
T156 61-63 IN denotes of
T157 64-82 JJ denotes antigen-presenting
T158 83-88 NNS denotes cells
T159 89-95 IN denotes during
T160 96-102 JJ denotes immune
T161 103-112 NNS denotes responses
T162 112-113 . denotes .
T163 114-116 IN denotes In
T164 117-128 NNS denotes macrophages
T165 129-132 CC denotes and
T166 133-142 JJ denotes dendritic
T167 143-148 NNS denotes cells
T168 148-149 , denotes ,
T169 150-160 NN denotes engagement
T170 161-163 IN denotes of
T171 164-168 CD denotes CD40
T172 169-171 IN denotes by
T173 172-175 PRP$ denotes its
T174 176-182 NN denotes ligand
T175 183-188 NNP denotes CD154
T176 189-197 VBZ denotes provides
T177 198-205 NNS denotes signals
T178 206-214 JJ denotes critical
T179 215-218 IN denotes for
T180 219-233 JJ denotes anti-microbial
T181 234-237 CC denotes and
T182 238-239 NNP denotes T
T183 240-253 JJ denotes cell-mediated
T184 254-260 JJ denotes immune
R94 T172 T169 prep by,engagement
R95 T173 T175 poss its,CD154
R70 T148 T151 det a,receptor
R71 T149 T150 compound cell,surface
R72 T150 T151 compound surface,receptor
R73 T151 T147 attr receptor,is
R74 T152 T151 amod important,receptor
R75 T153 T152 prep in,important
R76 T154 T155 det the,activation
R77 T155 T153 pobj activation,in
R78 T156 T155 prep of,activation
R79 T157 T158 amod antigen-presenting,cells
R80 T158 T156 pobj cells,of
R81 T159 T152 prep during,important
R82 T160 T161 amod immune,responses
R83 T161 T159 pobj responses,during
R85 T163 T176 prep In,provides
R86 T164 T163 pobj macrophages,In
R87 T165 T164 cc and,macrophages
R88 T166 T167 amod dendritic,cells
R89 T167 T164 conj cells,macrophages
R90 T168 T167 punct ",",cells
R91 T169 T176 nsubj engagement,provides
R92 T170 T169 prep of,engagement
R93 T171 T170 pobj CD40,of
R96 T174 T175 compound ligand,CD154
R97 T175 T172 pobj CD154,by
R98 T176 T176 ROOT provides,provides
R99 T177 T176 dobj signals,provides
R100 T178 T177 amod critical,signals
R101 T179 T178 prep for,critical
R102 T180 T179 pobj anti-microbial,for
R103 T181 T180 cc and,anti-microbial

GO-BP

Id Subject Object Predicate Lexical cue
T754 96-112 http://purl.obolibrary.org/obo/GO_0006955 denotes immune responses
T756 198-205 http://purl.obolibrary.org/obo/GO_0023052 denotes signals
T766 240-260 http://purl.obolibrary.org/obo/GO_0002449 denotes cell-mediated immune
T767 240-260 http://purl.obolibrary.org/obo/GO_0002456 denotes cell-mediated immune
T768 240-260 http://purl.obolibrary.org/obo/GO_0019724 denotes cell-mediated immune
T769 240-260 http://purl.obolibrary.org/obo/GO_0002228 denotes cell-mediated immune
T771 240-260 http://purl.obolibrary.org/obo/GO_0001909 denotes cell-mediated immune

GO-MF

Id Subject Object Predicate Lexical cue
T794 176-182 http://purl.obolibrary.org/obo/GO_0005488 denotes ligand

GO-CC

Id Subject Object Predicate Lexical cue
T798 11-15 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T799 240-244 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T806 11-23 http://purl.obolibrary.org/obo/GO_0009986 denotes cell surface

sentences

Id Subject Object Predicate Lexical cue
T122 1-113 Sentence denotes CD40 is a cell surface receptor important in the activation of antigen-presenting cells during immune responses.
T3 1-113 Sentence denotes CD40 is a cell surface receptor important in the activation of antigen-presenting cells during immune responses.

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T705 1-5 P25942 denotes CD40
T706 164-168 P25942 denotes CD40
T707 183-188 P29965 denotes CD154

test2

Id Subject Object Predicate Lexical cue
T44 1-5 Protein denotes CD40
T45 150-160 Binding denotes engagement
T46 164-168 Protein denotes CD40
T47 176-182 Protein denotes ligand
T48 183-188 Protein denotes CD154
R21 T46 T45 themeOf CD40,engagement
R22 T48 T45 themeOf CD154,engagement