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PMC:3148254 / 11332-11583 JSONTXT

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bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T4236 40-44 Protein denotes IL-4
T4237 63-66 Protein denotes GLε
T4238 67-77 Gene_expression denotes expression
T4239 83-90 Positive_regulation denotes induced
T4240 94-98 Protein denotes HOIP
T4241 99-112 Positive_regulation denotes reconstituted
T4242 177-181 Protein denotes IL-4
T4243 225-229 Protein denotes HOIP
R3246 T4237 T4238 themeOf GLε,expression
R3247 T4238 T4239 themeOf expression,induced
R3248 T4240 T4241 themeOf HOIP,reconstituted

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T5312 3-7 Protein denotes CD40
T5313 31-35 Protein denotes CD40
T5314 40-44 Protein denotes IL-4
T5315 135-153 Protein denotes anti-CD40 antibody

events-check-again

Id Subject Object Predicate Lexical cue
T5379 40-44 Protein denotes IL-4
T5380 63-66 Protein denotes GLε
T5381 67-77 Gene_expression denotes expression
T5382 83-90 Positive_regulation denotes induced
T5383 94-98 Protein denotes HOIP
T5384 99-112 Positive_regulation denotes reconstituted
T5385 177-181 Protein denotes IL-4
T5386 225-229 Protein denotes HOIP
R4148 T5380 T5381 themeOf GLε,expression
R4149 T5381 T5382 themeOf expression,induced
R4150 T5383 T5384 themeOf HOIP,reconstituted

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T4960 8-16 NN denotes antibody
T4961 17-22 RB denotes alone
T4962 23-25 CC denotes or
T4963 26-35 NN denotes anti-CD40
T4964 36-39 CC denotes and
T4965 40-44 NN denotes IL-4
T4966 46-52 JJ denotes Normal
T4967 53-59 NN denotes levels
T4968 60-62 IN denotes of
T4969 63-66 NN denotes GLε
T4970 67-77 NN denotes expression
T4971 78-82 VB denotes were
T4972 83-90 VB denotes induced
T4973 91-93 IN denotes in
T4974 94-112 JJ denotes HOIP-reconstituted
T4975 113-118 NN denotes cells
T4976 119-129 VB denotes stimulated
T4977 130-134 IN denotes with
T4978 135-144 JJ denotes anti-CD40
T4979 145-153 NN denotes antibody
T4980 154-159 RB denotes alone
T4981 160-162 CC denotes or
T4982 163-171 RB denotes together
T4983 172-176 IN denotes with
T4984 177-181 NN denotes IL-4
T4985 183-195 RB denotes Collectively
T4986 195-196 -COMMA- denotes ,
T4987 197-202 DT denotes these
T4988 203-207 NN denotes data
T4989 208-219 VB denotes demonstrate
T4990 220-224 IN denotes that
T4991 225-229 NN denotes HOIP
T4992 230-233 VB denotes has
T4993 234-235 DT denotes a
T4994 236-244 JJ denotes critical
T4995 245-249 NN denotes role
R3957 T4960 T4961 arg1Of antibody,alone
R3958 T4960 T4962 arg1Of antibody,or
R3961 T4963 T4964 arg1Of anti-CD40,and
R3962 T4964 T4962 arg2Of and,or
R3963 T4965 T4964 arg2Of IL-4,and
R3964 T4967 T4966 arg1Of levels,Normal
R3965 T4967 T4968 arg1Of levels,of
R3966 T4967 T4971 arg1Of levels,were
R3967 T4967 T4972 arg2Of levels,induced
R3968 T4970 T4968 arg2Of expression,of
R3969 T4970 T4969 arg1Of expression,GLε
R3970 T4972 T4971 arg2Of induced,were
R3971 T4972 T4973 arg1Of induced,in
R3972 T4975 T4973 arg2Of cells,in
R3973 T4975 T4974 arg1Of cells,HOIP-reconstituted
R3974 T4975 T4976 arg2Of cells,stimulated
R3975 T4976 T4977 arg1Of stimulated,with
R3976 T4979 T4977 arg2Of antibody,with
R3977 T4979 T4978 arg1Of antibody,anti-CD40
R3978 T4979 T4980 arg1Of antibody,alone
R3979 T4979 T4982 arg1Of antibody,together
R3980 T4980 T4981 arg1Of alone,or
R3981 T4981 T4983 arg1Of or,with
R3982 T4982 T4981 arg2Of together,or
R3983 T4984 T4983 arg2Of IL-4,with
R3984 T4988 T4987 arg1Of data,these
R3985 T4988 T4989 arg1Of data,demonstrate
R3986 T4989 T4985 arg1Of demonstrate,Collectively
R3987 T4989 T4986 arg1Of demonstrate,","
R3988 T4991 T4992 arg1Of HOIP,has
R3989 T4992 T4989 arg2Of has,demonstrate
R3990 T4992 T4990 arg1Of has,that
R3992 T4995 T4992 arg2Of role,has
R3993 T4995 T4993 arg1Of role,a
R3994 T4995 T4994 arg1Of role,critical

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T4594 8-16 NN denotes antibody
T4595 17-22 RB denotes alone
T4596 23-25 CC denotes or
T4597 26-35 JJ denotes anti-CD40
T4598 36-39 CC denotes and
T4599 40-44 NN denotes IL-4
T4600 44-45 . denotes .
T4601 46-52 JJ denotes Normal
T4602 53-59 NNS denotes levels
T4603 60-62 IN denotes of
T4604 63-66 NNP denotes GLε
T4605 67-77 NN denotes expression
T4606 78-82 VBD denotes were
T4607 83-90 VBN denotes induced
T4608 91-93 IN denotes in
T4609 94-112 JJ denotes HOIP-reconstituted
T4610 113-118 NNS denotes cells
T4611 119-129 VBN denotes stimulated
T4612 130-134 IN denotes with
T4613 135-144 JJ denotes anti-CD40
T4614 145-153 NN denotes antibody
T4615 154-159 RB denotes alone
T4616 160-162 CC denotes or
T4617 163-171 RB denotes together
T4618 172-176 IN denotes with
T4619 177-181 NN denotes IL-4
T4620 181-182 . denotes .
T4621 183-195 RB denotes Collectively
T4622 195-196 , denotes ,
T4623 197-202 DT denotes these
T4624 203-207 NNS denotes data
T4625 208-219 VBP denotes demonstrate
T4626 220-224 IN denotes that
T4627 225-229 NNP denotes HOIP
T4628 230-233 VBZ denotes has
T4629 234-235 DT denotes a
T4630 236-244 JJ denotes critical
T4631 245-249 NN denotes role
R3585 T4595 T4594 advmod alone,antibody
R3586 T4596 T4594 cc or,antibody
R3587 T4597 T4594 conj anti-CD40,antibody
R3588 T4598 T4597 cc and,anti-CD40
R3589 T4599 T4597 conj IL-4,anti-CD40
R3591 T4601 T4602 amod Normal,levels
R3592 T4602 T4607 nsubjpass levels,induced
R3593 T4603 T4602 prep of,levels
R3594 T4604 T4605 compound GLε,expression
R3595 T4605 T4603 pobj expression,of
R3596 T4606 T4607 auxpass were,induced
R3597 T4607 T4607 ROOT induced,induced
R3598 T4608 T4607 prep in,induced
R3599 T4609 T4610 amod HOIP-reconstituted,cells
R3600 T4610 T4608 pobj cells,in
R3601 T4611 T4607 conj stimulated,induced
R3602 T4612 T4611 prep with,stimulated
R3603 T4613 T4614 amod anti-CD40,antibody
R3604 T4614 T4612 pobj antibody,with
R3605 T4615 T4614 advmod alone,antibody
R3606 T4616 T4615 cc or,alone
R3607 T4617 T4618 advmod together,with
R3608 T4618 T4615 conj with,alone
R3609 T4619 T4618 pobj IL-4,with
R3610 T4620 T4607 punct .,induced
R3611 T4621 T4625 advmod Collectively,demonstrate
R3612 T4622 T4625 punct ",",demonstrate
R3613 T4623 T4624 det these,data
R3614 T4624 T4625 nsubj data,demonstrate
R3615 T4625 T4625 ROOT demonstrate,demonstrate
R3616 T4626 T4628 mark that,has
R3617 T4627 T4628 nsubj HOIP,has
R3618 T4628 T4625 ccomp has,demonstrate
R3619 T4629 T4631 det a,role
R3620 T4630 T4631 amod critical,role
R3621 T4631 T4628 dobj role,has

GO-MF

Id Subject Object Predicate Lexical cue
T5090 8-16 http://purl.obolibrary.org/obo/GO_0003823 denotes antibody
T5091 145-153 http://purl.obolibrary.org/obo/GO_0003823 denotes antibody
T5095 40-44 http://purl.obolibrary.org/obo/GO_0005136 denotes IL-4
T5096 177-181 http://purl.obolibrary.org/obo/GO_0005136 denotes IL-4

GO-CC

Id Subject Object Predicate Lexical cue
T5108 113-118 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T5113 8-16 http://purl.obolibrary.org/obo/GO_0019815 denotes antibody
T5114 145-153 http://purl.obolibrary.org/obo/GO_0019815 denotes antibody
T5117 8-16 http://purl.obolibrary.org/obo/GO_0042571 denotes antibody
T5118 145-153 http://purl.obolibrary.org/obo/GO_0042571 denotes antibody

sentences

Id Subject Object Predicate Lexical cue
T4257 46-182 Sentence denotes Normal levels of GLε expression were induced in HOIP-reconstituted cells stimulated with anti-CD40 antibody alone or together with IL-4.
T78 46-182 Sentence denotes Normal levels of GLε expression were induced in HOIP-reconstituted cells stimulated with anti-CD40 antibody alone or together with IL-4.

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T5046 3-7 P25942 denotes CD40
T5047 31-35 P25942 denotes CD40
T5048 40-44 P05112 denotes IL-4
T5049 63-66 Q28322 denotes GLε
T5050 94-98 Q96EP0 denotes HOIP
T5051 140-144 P25942 denotes CD40
T5052 177-181 P05112 denotes IL-4
T5053 225-229 Q96EP0 denotes HOIP

test2

Id Subject Object Predicate Lexical cue
T4165 40-44 Protein denotes IL-4
T4166 63-66 Protein denotes GLε
T4167 67-77 Gene_expression denotes expression
T4168 83-90 Positive_regulation denotes induced
T4169 94-98 Protein denotes HOIP
T4170 99-112 Positive_regulation denotes reconstituted
T4171 177-181 Protein denotes IL-4
T4172 225-229 Protein denotes HOIP
R3203 T4166 T4167 themeOf GLε,expression
R3204 T4167 T4168 themeOf expression,induced
R3205 T4169 T4170 themeOf HOIP,reconstituted
R3206 T4170 T4168 causeOf reconstituted,induced