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PMC:3148254 / 1071-1230
Annnotations
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T99 | 9-13 | Protein | denotes | CD40 |
T100 | 31-35 | Protein | denotes | HOIP |
T101 | 54-58 | Protein | denotes | CD40 |
T102 | 103-107 | Protein | denotes | HOIP |
T103 | 111-115 | Protein | denotes | CD40 |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T912 | 9-13 | Protein | denotes | CD40 |
T913 | 54-58 | Protein | denotes | CD40 |
T919 | 103-107 | Protein | denotes | HOIP |
T920 | 111-115 | Protein | denotes | CD40 |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T959 | 9-13 | Protein | denotes | CD40 |
T960 | 31-35 | Protein | denotes | HOIP |
T961 | 54-58 | Protein | denotes | CD40 |
T962 | 103-107 | Protein | denotes | HOIP |
T963 | 111-115 | Protein | denotes | CD40 |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T581 | 6-8 | IN | denotes | of |
T582 | 9-13 | NN | denotes | CD40 |
T583 | 13-14 | -COMMA- | denotes | , |
T584 | 15-25 | VB | denotes | suggesting |
T585 | 26-30 | IN | denotes | that |
T586 | 31-35 | NN | denotes | HOIP |
T587 | 36-39 | VB | denotes | has |
T588 | 40-41 | DT | denotes | a |
T589 | 42-46 | NN | denotes | role |
T590 | 47-49 | IN | denotes | in |
T591 | 50-53 | DT | denotes | the |
T592 | 54-58 | NN | denotes | CD40 |
T593 | 59-68 | NN | denotes | signaling |
T594 | 69-76 | NN | denotes | pathway |
T595 | 78-80 | TO | denotes | To |
T596 | 81-90 | VB | denotes | determine |
T597 | 91-94 | DT | denotes | the |
T598 | 95-99 | NN | denotes | role |
T599 | 100-102 | IN | denotes | of |
T600 | 103-107 | NN | denotes | HOIP |
T601 | 108-110 | IN | denotes | in |
T602 | 111-115 | NN | denotes | CD40 |
T603 | 116-125 | NN | denotes | signaling |
T604 | 125-126 | -COMMA- | denotes | , |
T605 | 127-129 | PRP | denotes | we |
T606 | 130-134 | VB | denotes | used |
T607 | 135-142 | JJ | denotes | somatic |
T608 | 143-147 | NN | denotes | cell |
T609 | 148-152 | NN | denotes | gene |
R501 | T582 | T581 | arg2Of | CD40,of |
R503 | T586 | T587 | arg1Of | HOIP,has |
R504 | T587 | T584 | arg2Of | has,suggesting |
R505 | T587 | T585 | arg1Of | has,that |
R506 | T587 | T590 | arg1Of | has,in |
R507 | T589 | T587 | arg2Of | role,has |
R508 | T589 | T588 | arg1Of | role,a |
R509 | T594 | T590 | arg2Of | pathway,in |
R510 | T594 | T591 | arg1Of | pathway,the |
R511 | T594 | T592 | arg1Of | pathway,CD40 |
R512 | T594 | T593 | arg1Of | pathway,signaling |
R513 | T596 | T595 | arg1Of | determine,To |
R514 | T598 | T596 | arg2Of | role,determine |
R515 | T598 | T597 | arg1Of | role,the |
R516 | T598 | T599 | arg1Of | role,of |
R517 | T598 | T601 | arg1Of | role,in |
R518 | T600 | T599 | arg2Of | HOIP,of |
R519 | T603 | T601 | arg2Of | signaling,in |
R520 | T603 | T602 | arg1Of | signaling,CD40 |
R521 | T605 | T606 | arg1Of | we,used |
R522 | T606 | T595 | modOf | used,To |
R523 | T606 | T604 | arg1Of | used,"," |
R525 | T609 | T606 | arg2Of | gene,used |
R526 | T609 | T607 | arg1Of | gene,somatic |
R527 | T609 | T608 | arg1Of | gene,cell |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T297 | 6-8 | IN | denotes | of |
T298 | 9-13 | NNP | denotes | CD40 |
T299 | 13-14 | , | denotes | , |
T300 | 15-25 | VBG | denotes | suggesting |
T301 | 26-30 | IN | denotes | that |
T302 | 31-35 | NNP | denotes | HOIP |
T303 | 36-39 | VBZ | denotes | has |
T304 | 40-41 | DT | denotes | a |
T305 | 42-46 | NN | denotes | role |
T306 | 47-49 | IN | denotes | in |
T307 | 50-53 | DT | denotes | the |
T308 | 54-58 | NNP | denotes | CD40 |
T309 | 59-68 | VBG | denotes | signaling |
T310 | 69-76 | NN | denotes | pathway |
T311 | 76-77 | . | denotes | . |
T312 | 78-80 | TO | denotes | To |
T313 | 81-90 | VB | denotes | determine |
T314 | 91-94 | DT | denotes | the |
T315 | 95-99 | NN | denotes | role |
T316 | 100-102 | IN | denotes | of |
T317 | 103-107 | NNP | denotes | HOIP |
T318 | 108-110 | IN | denotes | in |
T319 | 111-115 | NNP | denotes | CD40 |
T320 | 116-125 | VBG | denotes | signaling |
T321 | 125-126 | , | denotes | , |
T322 | 127-129 | PRP | denotes | we |
T323 | 130-134 | VBD | denotes | used |
T324 | 135-142 | JJ | denotes | somatic |
T325 | 143-147 | NN | denotes | cell |
T326 | 148-152 | NN | denotes | gene |
R220 | T298 | T297 | pobj | CD40,of |
R223 | T301 | T303 | mark | that,has |
R224 | T302 | T303 | nsubj | HOIP,has |
R225 | T303 | T300 | ccomp | has,suggesting |
R226 | T304 | T305 | det | a,role |
R227 | T305 | T303 | dobj | role,has |
R228 | T306 | T305 | prep | in,role |
R229 | T307 | T310 | det | the,pathway |
R230 | T308 | T310 | nmod | CD40,pathway |
R231 | T309 | T310 | amod | signaling,pathway |
R232 | T310 | T306 | pobj | pathway,in |
R234 | T312 | T313 | aux | To,determine |
R235 | T313 | T323 | advcl | determine,used |
R236 | T314 | T315 | det | the,role |
R237 | T315 | T313 | dobj | role,determine |
R238 | T316 | T315 | prep | of,role |
R239 | T317 | T316 | pobj | HOIP,of |
R240 | T318 | T315 | prep | in,role |
R241 | T319 | T318 | pobj | CD40,in |
R242 | T320 | T315 | acl | signaling,role |
R243 | T321 | T323 | punct | ",",used |
R244 | T322 | T323 | nsubj | we,used |
R245 | T323 | T323 | ROOT | used,used |
R246 | T324 | T326 | compound | somatic,gene |
R247 | T325 | T326 | compound | cell,gene |
R248 | T326 | T323 | dobj | gene,used |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T761 | 59-68 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signaling |
T762 | 116-125 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signaling |
T786 | 54-76 | http://purl.obolibrary.org/obo/GO_0023035 | denotes | CD40 signaling pathway |
T788 | 54-76 | http://purl.obolibrary.org/obo/GO_2000348 | denotes | CD40 signaling pathway |
T790 | 59-76 | http://purl.obolibrary.org/obo/GO_0007165 | denotes | signaling pathway |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T802 | 143-147 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T721 | 9-13 | P25942 | denotes | CD40 |
T722 | 31-35 | Q96EP0 | denotes | HOIP |
T723 | 54-58 | P25942 | denotes | CD40 |
T724 | 103-107 | Q96EP0 | denotes | HOIP |
T725 | 111-115 | P25942 | denotes | CD40 |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T59 | 9-13 | Protein | denotes | CD40 |
T60 | 31-35 | Protein | denotes | HOIP |
T61 | 54-58 | Protein | denotes | CD40 |
T62 | 103-107 | Protein | denotes | HOIP |
T63 | 111-115 | Protein | denotes | CD40 |