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PMC:3148254 / 1071-1230 JSONTXT

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bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T99 9-13 Protein denotes CD40
T100 31-35 Protein denotes HOIP
T101 54-58 Protein denotes CD40
T102 103-107 Protein denotes HOIP
T103 111-115 Protein denotes CD40

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T912 9-13 Protein denotes CD40
T913 54-58 Protein denotes CD40
T919 103-107 Protein denotes HOIP
T920 111-115 Protein denotes CD40

events-check-again

Id Subject Object Predicate Lexical cue
T959 9-13 Protein denotes CD40
T960 31-35 Protein denotes HOIP
T961 54-58 Protein denotes CD40
T962 103-107 Protein denotes HOIP
T963 111-115 Protein denotes CD40

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T581 6-8 IN denotes of
T582 9-13 NN denotes CD40
T583 13-14 -COMMA- denotes ,
T584 15-25 VB denotes suggesting
T585 26-30 IN denotes that
T586 31-35 NN denotes HOIP
T587 36-39 VB denotes has
T588 40-41 DT denotes a
T589 42-46 NN denotes role
T590 47-49 IN denotes in
T591 50-53 DT denotes the
T592 54-58 NN denotes CD40
T593 59-68 NN denotes signaling
T594 69-76 NN denotes pathway
T595 78-80 TO denotes To
T596 81-90 VB denotes determine
T597 91-94 DT denotes the
T598 95-99 NN denotes role
T599 100-102 IN denotes of
T600 103-107 NN denotes HOIP
T601 108-110 IN denotes in
T602 111-115 NN denotes CD40
T603 116-125 NN denotes signaling
T604 125-126 -COMMA- denotes ,
T605 127-129 PRP denotes we
T606 130-134 VB denotes used
T607 135-142 JJ denotes somatic
T608 143-147 NN denotes cell
T609 148-152 NN denotes gene
R501 T582 T581 arg2Of CD40,of
R503 T586 T587 arg1Of HOIP,has
R504 T587 T584 arg2Of has,suggesting
R505 T587 T585 arg1Of has,that
R506 T587 T590 arg1Of has,in
R507 T589 T587 arg2Of role,has
R508 T589 T588 arg1Of role,a
R509 T594 T590 arg2Of pathway,in
R510 T594 T591 arg1Of pathway,the
R511 T594 T592 arg1Of pathway,CD40
R512 T594 T593 arg1Of pathway,signaling
R513 T596 T595 arg1Of determine,To
R514 T598 T596 arg2Of role,determine
R515 T598 T597 arg1Of role,the
R516 T598 T599 arg1Of role,of
R517 T598 T601 arg1Of role,in
R518 T600 T599 arg2Of HOIP,of
R519 T603 T601 arg2Of signaling,in
R520 T603 T602 arg1Of signaling,CD40
R521 T605 T606 arg1Of we,used
R522 T606 T595 modOf used,To
R523 T606 T604 arg1Of used,","
R525 T609 T606 arg2Of gene,used
R526 T609 T607 arg1Of gene,somatic
R527 T609 T608 arg1Of gene,cell

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T297 6-8 IN denotes of
T298 9-13 NNP denotes CD40
T299 13-14 , denotes ,
T300 15-25 VBG denotes suggesting
T301 26-30 IN denotes that
T302 31-35 NNP denotes HOIP
T303 36-39 VBZ denotes has
T304 40-41 DT denotes a
T305 42-46 NN denotes role
T306 47-49 IN denotes in
T307 50-53 DT denotes the
T308 54-58 NNP denotes CD40
T309 59-68 VBG denotes signaling
T310 69-76 NN denotes pathway
T311 76-77 . denotes .
T312 78-80 TO denotes To
T313 81-90 VB denotes determine
T314 91-94 DT denotes the
T315 95-99 NN denotes role
T316 100-102 IN denotes of
T317 103-107 NNP denotes HOIP
T318 108-110 IN denotes in
T319 111-115 NNP denotes CD40
T320 116-125 VBG denotes signaling
T321 125-126 , denotes ,
T322 127-129 PRP denotes we
T323 130-134 VBD denotes used
T324 135-142 JJ denotes somatic
T325 143-147 NN denotes cell
T326 148-152 NN denotes gene
R220 T298 T297 pobj CD40,of
R223 T301 T303 mark that,has
R224 T302 T303 nsubj HOIP,has
R225 T303 T300 ccomp has,suggesting
R226 T304 T305 det a,role
R227 T305 T303 dobj role,has
R228 T306 T305 prep in,role
R229 T307 T310 det the,pathway
R230 T308 T310 nmod CD40,pathway
R231 T309 T310 amod signaling,pathway
R232 T310 T306 pobj pathway,in
R234 T312 T313 aux To,determine
R235 T313 T323 advcl determine,used
R236 T314 T315 det the,role
R237 T315 T313 dobj role,determine
R238 T316 T315 prep of,role
R239 T317 T316 pobj HOIP,of
R240 T318 T315 prep in,role
R241 T319 T318 pobj CD40,in
R242 T320 T315 acl signaling,role
R243 T321 T323 punct ",",used
R244 T322 T323 nsubj we,used
R245 T323 T323 ROOT used,used
R246 T324 T326 compound somatic,gene
R247 T325 T326 compound cell,gene
R248 T326 T323 dobj gene,used

GO-BP

Id Subject Object Predicate Lexical cue
T761 59-68 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T762 116-125 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T786 54-76 http://purl.obolibrary.org/obo/GO_0023035 denotes CD40 signaling pathway
T788 54-76 http://purl.obolibrary.org/obo/GO_2000348 denotes CD40 signaling pathway
T790 59-76 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathway

GO-CC

Id Subject Object Predicate Lexical cue
T802 143-147 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T721 9-13 P25942 denotes CD40
T722 31-35 Q96EP0 denotes HOIP
T723 54-58 P25942 denotes CD40
T724 103-107 Q96EP0 denotes HOIP
T725 111-115 P25942 denotes CD40

test2

Id Subject Object Predicate Lexical cue
T59 9-13 Protein denotes CD40
T60 31-35 Protein denotes HOIP
T61 54-58 Protein denotes CD40
T62 103-107 Protein denotes HOIP
T63 111-115 Protein denotes CD40