Id |
Subject |
Object |
Predicate |
Lexical cue |
T13578 |
0-3 |
DT |
denotes |
The |
T13579 |
14-23 |
NN |
denotes |
transgene |
T13580 |
4-9 |
NN |
denotes |
Hoxb6 |
T13581 |
10-13 |
NN |
denotes |
Cre |
T13582 |
9-10 |
HYPH |
denotes |
- |
T13583 |
80-89 |
VBN |
denotes |
expressed |
T13584 |
24-33 |
VBN |
denotes |
described |
T13585 |
34-36 |
IN |
denotes |
by |
T13586 |
37-42 |
NN |
denotes |
Kuehn |
T13587 |
43-46 |
CC |
denotes |
and |
T13588 |
47-57 |
NNS |
denotes |
colleagues |
T13589 |
58-59 |
-LRB- |
denotes |
( |
T13590 |
59-63 |
NNP |
denotes |
Lowe |
T13591 |
64-66 |
FW |
denotes |
et |
T13592 |
67-70 |
FW |
denotes |
al. |
T13593 |
71-75 |
CD |
denotes |
2000 |
T13594 |
75-76 |
-RRB- |
denotes |
) |
T13595 |
77-79 |
VBZ |
denotes |
is |
T13596 |
90-92 |
IN |
denotes |
in |
T13597 |
93-96 |
DT |
denotes |
the |
T13598 |
105-110 |
NN |
denotes |
plate |
T13599 |
97-104 |
JJ |
denotes |
lateral |
T13600 |
111-114 |
CC |
denotes |
but |
T13601 |
115-118 |
RB |
denotes |
not |
T13602 |
119-122 |
DT |
denotes |
the |
T13603 |
131-139 |
NN |
denotes |
mesoderm |
T13604 |
123-130 |
JJ |
denotes |
somitic |
T13605 |
140-142 |
IN |
denotes |
of |
T13606 |
143-146 |
DT |
denotes |
the |
T13607 |
147-152 |
NN |
denotes |
trunk |
T13608 |
152-154 |
, |
denotes |
, |
T13609 |
154-163 |
VBG |
denotes |
beginning |
T13610 |
164-166 |
IN |
denotes |
at |
T13611 |
167-171 |
NN |
denotes |
E9.5 |
T13612 |
171-172 |
. |
denotes |
. |
T13613 |
172-299 |
sentence |
denotes |
Animals doubly heterozygous for this transgene and the R26R reporter gene were used as a source of whole skin at P1.5 or P4.5. |
T13614 |
173-180 |
NNS |
denotes |
Animals |
T13615 |
252-256 |
VBN |
denotes |
used |
T13616 |
181-187 |
RB |
denotes |
doubly |
T13617 |
188-200 |
JJ |
denotes |
heterozygous |
T13618 |
201-204 |
IN |
denotes |
for |
T13619 |
205-209 |
DT |
denotes |
this |
T13620 |
210-219 |
NN |
denotes |
transgene |
T13621 |
220-223 |
CC |
denotes |
and |
T13622 |
224-227 |
DT |
denotes |
the |
T13623 |
242-246 |
NN |
denotes |
gene |
T13624 |
228-232 |
NN |
denotes |
R26R |
T13625 |
233-241 |
NN |
denotes |
reporter |
T13626 |
247-251 |
VBD |
denotes |
were |
T13627 |
257-259 |
IN |
denotes |
as |
T13628 |
260-261 |
DT |
denotes |
a |
T13629 |
262-268 |
NN |
denotes |
source |
T13630 |
269-271 |
IN |
denotes |
of |
T13631 |
272-277 |
JJ |
denotes |
whole |
T13632 |
278-282 |
NN |
denotes |
skin |
T13633 |
283-285 |
IN |
denotes |
at |
T13634 |
286-290 |
NN |
denotes |
P1.5 |
T13635 |
291-293 |
CC |
denotes |
or |
T13636 |
294-298 |
NN |
denotes |
P4.5 |
T13637 |
298-299 |
. |
denotes |
. |
T13638 |
299-497 |
sentence |
denotes |
Skin sections parallel to the dorsoventral axis were prepared with a single incision along the ventral midline and stained for β-galactosidase activity using standard protocols at room temperature. |
T13639 |
300-304 |
NN |
denotes |
Skin |
T13640 |
305-313 |
NNS |
denotes |
sections |
T13641 |
353-361 |
VBN |
denotes |
prepared |
T13642 |
314-322 |
JJ |
denotes |
parallel |
T13643 |
323-325 |
IN |
denotes |
to |
T13644 |
326-329 |
DT |
denotes |
the |
T13645 |
343-347 |
NN |
denotes |
axis |
T13646 |
330-342 |
JJ |
denotes |
dorsoventral |
T13647 |
348-352 |
VBD |
denotes |
were |
T13648 |
362-366 |
IN |
denotes |
with |
T13649 |
367-368 |
DT |
denotes |
a |
T13650 |
376-384 |
NN |
denotes |
incision |
T13651 |
369-375 |
JJ |
denotes |
single |
T13652 |
385-390 |
IN |
denotes |
along |
T13653 |
391-394 |
DT |
denotes |
the |
T13654 |
403-410 |
NN |
denotes |
midline |
T13655 |
395-402 |
JJ |
denotes |
ventral |
T13656 |
411-414 |
CC |
denotes |
and |
T13657 |
415-422 |
VBN |
denotes |
stained |
T13658 |
423-426 |
IN |
denotes |
for |
T13659 |
427-428 |
NN |
denotes |
β |
T13660 |
429-442 |
NN |
denotes |
galactosidase |
T13661 |
428-429 |
HYPH |
denotes |
- |
T13662 |
443-451 |
NN |
denotes |
activity |
T13663 |
452-457 |
VBG |
denotes |
using |
T13664 |
458-466 |
JJ |
denotes |
standard |
T13665 |
467-476 |
NNS |
denotes |
protocols |
T13666 |
477-479 |
IN |
denotes |
at |
T13667 |
480-484 |
NN |
denotes |
room |
T13668 |
485-496 |
NN |
denotes |
temperature |
T13669 |
496-497 |
. |
denotes |
. |
T13670 |
497-580 |
sentence |
denotes |
The P1.5 sample was stained overnight and the P4.5 samples were stained for 5.5 h. |
T13671 |
498-501 |
DT |
denotes |
The |
T13672 |
507-513 |
NN |
denotes |
sample |
T13673 |
502-506 |
NN |
denotes |
P1.5 |
T13674 |
518-525 |
VBN |
denotes |
stained |
T13675 |
514-517 |
VBD |
denotes |
was |
T13676 |
526-535 |
RB |
denotes |
overnight |
T13677 |
536-539 |
CC |
denotes |
and |
T13678 |
540-543 |
DT |
denotes |
the |
T13679 |
549-556 |
NNS |
denotes |
samples |
T13680 |
544-548 |
NN |
denotes |
P4.5 |
T13681 |
562-569 |
VBN |
denotes |
stained |
T13682 |
557-561 |
VBD |
denotes |
were |
T13683 |
570-573 |
IN |
denotes |
for |
T13684 |
574-577 |
CD |
denotes |
5.5 |
T13685 |
578-579 |
NN |
denotes |
h |
T13686 |
579-580 |
. |
denotes |
. |
T13687 |
580-664 |
sentence |
denotes |
Similar nonstained skin sections were prepared from animals carrying the at allele. |
T13688 |
581-588 |
JJ |
denotes |
Similar |
T13689 |
605-613 |
NNS |
denotes |
sections |
T13690 |
589-599 |
JJ |
denotes |
nonstained |
T13691 |
600-604 |
NN |
denotes |
skin |
T13692 |
619-627 |
VBN |
denotes |
prepared |
T13693 |
614-618 |
VBD |
denotes |
were |
T13694 |
628-632 |
IN |
denotes |
from |
T13695 |
633-640 |
NNS |
denotes |
animals |
T13696 |
641-649 |
VBG |
denotes |
carrying |
T13697 |
650-653 |
DT |
denotes |
the |
T13698 |
657-663 |
NN |
denotes |
allele |
T13699 |
654-656 |
NN |
denotes |
at |
T13700 |
663-664 |
. |
denotes |
. |
T13701 |
664-842 |
sentence |
denotes |
Images of the different skin fragments were aligned and scaled, and the relative position of the somite–lateral plate and the pigmentation boundaries were measured using ImageJ. |
T13702 |
665-671 |
NNS |
denotes |
Images |
T13703 |
709-716 |
VBN |
denotes |
aligned |
T13704 |
672-674 |
IN |
denotes |
of |
T13705 |
675-678 |
DT |
denotes |
the |
T13706 |
694-703 |
NNS |
denotes |
fragments |
T13707 |
679-688 |
JJ |
denotes |
different |
T13708 |
689-693 |
NN |
denotes |
skin |
T13709 |
704-708 |
VBD |
denotes |
were |
T13710 |
717-720 |
CC |
denotes |
and |
T13711 |
721-727 |
VBN |
denotes |
scaled |
T13712 |
727-729 |
, |
denotes |
, |
T13713 |
729-732 |
CC |
denotes |
and |
T13714 |
733-736 |
DT |
denotes |
the |
T13715 |
746-754 |
NN |
denotes |
position |
T13716 |
737-745 |
JJ |
denotes |
relative |
T13717 |
820-828 |
VBN |
denotes |
measured |
T13718 |
755-757 |
IN |
denotes |
of |
T13719 |
758-761 |
DT |
denotes |
the |
T13720 |
777-782 |
NN |
denotes |
plate |
T13721 |
762-768 |
NN |
denotes |
somite |
T13722 |
769-776 |
JJ |
denotes |
lateral |
T13723 |
768-769 |
HYPH |
denotes |
– |
T13724 |
783-786 |
CC |
denotes |
and |
T13725 |
787-790 |
DT |
denotes |
the |
T13726 |
804-814 |
NNS |
denotes |
boundaries |
T13727 |
791-803 |
NN |
denotes |
pigmentation |
T13728 |
815-819 |
VBD |
denotes |
were |
T13729 |
829-834 |
VBG |
denotes |
using |
T13730 |
835-841 |
NN |
denotes |
ImageJ |
T13731 |
841-842 |
. |
denotes |
. |
R9504 |
T13578 |
T13579 |
det |
The,transgene |
R9505 |
T13579 |
T13583 |
nsubjpass |
transgene,expressed |
R9506 |
T13580 |
T13581 |
compound |
Hoxb6,Cre |
R9507 |
T13581 |
T13579 |
compound |
Cre,transgene |
R9508 |
T13582 |
T13581 |
punct |
-,Cre |
R9509 |
T13584 |
T13579 |
acl |
described,transgene |
R9510 |
T13585 |
T13584 |
agent |
by,described |
R9511 |
T13586 |
T13585 |
pobj |
Kuehn,by |
R9512 |
T13587 |
T13586 |
cc |
and,Kuehn |
R9513 |
T13588 |
T13586 |
conj |
colleagues,Kuehn |
R9514 |
T13589 |
T13590 |
punct |
(,Lowe |
R9515 |
T13590 |
T13584 |
meta |
Lowe,described |
R9516 |
T13591 |
T13590 |
nmod |
et,Lowe |
R9517 |
T13592 |
T13590 |
nmod |
al.,Lowe |
R9518 |
T13593 |
T13590 |
nummod |
2000,Lowe |
R9519 |
T13594 |
T13590 |
punct |
),Lowe |
R9520 |
T13595 |
T13583 |
auxpass |
is,expressed |
R9521 |
T13596 |
T13583 |
prep |
in,expressed |
R9522 |
T13597 |
T13598 |
det |
the,plate |
R9523 |
T13598 |
T13596 |
pobj |
plate,in |
R9524 |
T13599 |
T13598 |
amod |
lateral,plate |
R9525 |
T13600 |
T13598 |
cc |
but,plate |
R9526 |
T13601 |
T13600 |
neg |
not,but |
R9527 |
T13602 |
T13603 |
det |
the,mesoderm |
R9528 |
T13603 |
T13598 |
conj |
mesoderm,plate |
R9529 |
T13604 |
T13603 |
amod |
somitic,mesoderm |
R9530 |
T13605 |
T13598 |
prep |
of,plate |
R9531 |
T13606 |
T13607 |
det |
the,trunk |
R9532 |
T13607 |
T13605 |
pobj |
trunk,of |
R9533 |
T13608 |
T13583 |
punct |
", ",expressed |
R9534 |
T13609 |
T13583 |
advcl |
beginning,expressed |
R9535 |
T13610 |
T13609 |
prep |
at,beginning |
R9536 |
T13611 |
T13610 |
pobj |
E9.5,at |
R9537 |
T13612 |
T13583 |
punct |
.,expressed |
R9538 |
T13614 |
T13615 |
nsubjpass |
Animals,used |
R9539 |
T13616 |
T13617 |
advmod |
doubly,heterozygous |
R9540 |
T13617 |
T13614 |
amod |
heterozygous,Animals |
R9541 |
T13618 |
T13617 |
prep |
for,heterozygous |
R9542 |
T13619 |
T13620 |
det |
this,transgene |
R9543 |
T13620 |
T13618 |
pobj |
transgene,for |
R9544 |
T13621 |
T13620 |
cc |
and,transgene |
R9545 |
T13622 |
T13623 |
det |
the,gene |
R9546 |
T13623 |
T13620 |
conj |
gene,transgene |
R9547 |
T13624 |
T13623 |
compound |
R26R,gene |
R9548 |
T13625 |
T13623 |
compound |
reporter,gene |
R9549 |
T13626 |
T13615 |
auxpass |
were,used |
R9550 |
T13627 |
T13615 |
prep |
as,used |
R9551 |
T13628 |
T13629 |
det |
a,source |
R9552 |
T13629 |
T13627 |
pobj |
source,as |
R9553 |
T13630 |
T13629 |
prep |
of,source |
R9554 |
T13631 |
T13632 |
amod |
whole,skin |
R9555 |
T13632 |
T13630 |
pobj |
skin,of |
R9556 |
T13633 |
T13615 |
prep |
at,used |
R9557 |
T13634 |
T13633 |
pobj |
P1.5,at |
R9558 |
T13635 |
T13634 |
cc |
or,P1.5 |
R9559 |
T13636 |
T13634 |
conj |
P4.5,P1.5 |
R9560 |
T13637 |
T13615 |
punct |
.,used |
R9561 |
T13639 |
T13640 |
compound |
Skin,sections |
R9562 |
T13640 |
T13641 |
nsubjpass |
sections,prepared |
R9563 |
T13642 |
T13640 |
amod |
parallel,sections |
R9564 |
T13643 |
T13642 |
prep |
to,parallel |
R9565 |
T13644 |
T13645 |
det |
the,axis |
R9566 |
T13645 |
T13643 |
pobj |
axis,to |
R9567 |
T13646 |
T13645 |
amod |
dorsoventral,axis |
R9568 |
T13647 |
T13641 |
auxpass |
were,prepared |
R9569 |
T13648 |
T13641 |
prep |
with,prepared |
R9570 |
T13649 |
T13650 |
det |
a,incision |
R9571 |
T13650 |
T13648 |
pobj |
incision,with |
R9572 |
T13651 |
T13650 |
amod |
single,incision |
R9573 |
T13652 |
T13650 |
prep |
along,incision |
R9574 |
T13653 |
T13654 |
det |
the,midline |
R9575 |
T13654 |
T13652 |
pobj |
midline,along |
R9576 |
T13655 |
T13654 |
amod |
ventral,midline |
R9577 |
T13656 |
T13641 |
cc |
and,prepared |
R9578 |
T13657 |
T13641 |
conj |
stained,prepared |
R9579 |
T13658 |
T13657 |
prep |
for,stained |
R9580 |
T13659 |
T13660 |
compound |
β,galactosidase |
R9581 |
T13660 |
T13662 |
compound |
galactosidase,activity |
R9582 |
T13661 |
T13660 |
punct |
-,galactosidase |
R9583 |
T13662 |
T13658 |
pobj |
activity,for |
R9584 |
T13663 |
T13657 |
advcl |
using,stained |
R9585 |
T13664 |
T13665 |
amod |
standard,protocols |
R9586 |
T13665 |
T13663 |
dobj |
protocols,using |
R9587 |
T13666 |
T13657 |
prep |
at,stained |
R9588 |
T13667 |
T13668 |
compound |
room,temperature |
R9589 |
T13668 |
T13666 |
pobj |
temperature,at |
R9590 |
T13669 |
T13641 |
punct |
.,prepared |
R9591 |
T13671 |
T13672 |
det |
The,sample |
R9592 |
T13672 |
T13674 |
nsubjpass |
sample,stained |
R9593 |
T13673 |
T13672 |
compound |
P1.5,sample |
R9594 |
T13675 |
T13674 |
auxpass |
was,stained |
R9595 |
T13676 |
T13674 |
advmod |
overnight,stained |
R9596 |
T13677 |
T13674 |
cc |
and,stained |
R9597 |
T13678 |
T13679 |
det |
the,samples |
R9598 |
T13679 |
T13681 |
nsubjpass |
samples,stained |
R9599 |
T13680 |
T13679 |
compound |
P4.5,samples |
R9600 |
T13681 |
T13674 |
conj |
stained,stained |
R9601 |
T13682 |
T13681 |
auxpass |
were,stained |
R9602 |
T13683 |
T13681 |
prep |
for,stained |
R9603 |
T13684 |
T13685 |
nummod |
5.5,h |
R9604 |
T13685 |
T13683 |
pobj |
h,for |
R9605 |
T13686 |
T13681 |
punct |
.,stained |
R9606 |
T13688 |
T13689 |
amod |
Similar,sections |
R9607 |
T13689 |
T13692 |
nsubjpass |
sections,prepared |
R9608 |
T13690 |
T13689 |
amod |
nonstained,sections |
R9609 |
T13691 |
T13689 |
compound |
skin,sections |
R9610 |
T13693 |
T13692 |
auxpass |
were,prepared |
R9611 |
T13694 |
T13692 |
prep |
from,prepared |
R9612 |
T13695 |
T13694 |
pobj |
animals,from |
R9613 |
T13696 |
T13695 |
acl |
carrying,animals |
R9614 |
T13697 |
T13698 |
det |
the,allele |
R9615 |
T13698 |
T13696 |
dobj |
allele,carrying |
R9616 |
T13699 |
T13698 |
compound |
at,allele |
R9617 |
T13700 |
T13692 |
punct |
.,prepared |
R9618 |
T13702 |
T13703 |
nsubjpass |
Images,aligned |
R9619 |
T13704 |
T13702 |
prep |
of,Images |
R9620 |
T13705 |
T13706 |
det |
the,fragments |
R9621 |
T13706 |
T13704 |
pobj |
fragments,of |
R9622 |
T13707 |
T13706 |
amod |
different,fragments |
R9623 |
T13708 |
T13706 |
compound |
skin,fragments |
R9624 |
T13709 |
T13703 |
auxpass |
were,aligned |
R9625 |
T13710 |
T13703 |
cc |
and,aligned |
R9626 |
T13711 |
T13703 |
conj |
scaled,aligned |
R9627 |
T13712 |
T13703 |
punct |
", ",aligned |
R9628 |
T13713 |
T13703 |
cc |
and,aligned |
R9629 |
T13714 |
T13715 |
det |
the,position |
R9630 |
T13715 |
T13717 |
nsubjpass |
position,measured |
R9631 |
T13716 |
T13715 |
amod |
relative,position |
R9632 |
T13717 |
T13703 |
conj |
measured,aligned |
R9633 |
T13718 |
T13715 |
prep |
of,position |
R9634 |
T13719 |
T13720 |
det |
the,plate |
R9635 |
T13720 |
T13718 |
pobj |
plate,of |
R9636 |
T13721 |
T13722 |
npadvmod |
somite,lateral |
R9637 |
T13722 |
T13720 |
amod |
lateral,plate |
R9638 |
T13723 |
T13722 |
punct |
–,lateral |
R9639 |
T13724 |
T13720 |
cc |
and,plate |
R9640 |
T13725 |
T13726 |
det |
the,boundaries |
R9641 |
T13726 |
T13720 |
conj |
boundaries,plate |
R9642 |
T13727 |
T13726 |
compound |
pigmentation,boundaries |
R9643 |
T13728 |
T13717 |
auxpass |
were,measured |
R9644 |
T13729 |
T13717 |
advcl |
using,measured |
R9645 |
T13730 |
T13729 |
dobj |
ImageJ,using |
R9646 |
T13731 |
T13717 |
punct |
.,measured |