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PMC:314463 / 55100-56159 JSONTXT

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Id Subject Object Predicate Lexical cue
T11800 4-614 sentence denotes All mice were obtained originally from The Jackson Laboratory (Bar Harbor, Maine, United States), except the BA strain (Stanford Veterinary Services Center, Stanford, California, United States), Hoxb6-Cre transgenic mice (kindly provided by M. Kuehn of the National Institutes of Health, Bethesda, Maryland, United States), mice carrying the R26R lacZ reporter allele (kindly provided by P. Soriano, Fred Hutchinson Cancer Research Center, Seattle, Washington, United States), and C57BL/6J (B6) ae/ae mice (kindly provided by L. Siracusa, Jefferson Medical College, Philadelphia, Pennsylvania, United States).
T11801 5-8 DT denotes All
T11802 9-13 NNS denotes mice
T11803 19-27 VBN denotes obtained
T11804 14-18 VBD denotes were
T11805 28-38 RB denotes originally
T11806 39-43 IN denotes from
T11807 44-47 DT denotes The
T11808 56-66 NNP denotes Laboratory
T11809 48-55 NNP denotes Jackson
T11810 67-68 -LRB- denotes (
T11811 72-78 NNP denotes Harbor
T11812 68-71 NNP denotes Bar
T11813 78-80 , denotes ,
T11814 80-85 NNP denotes Maine
T11815 85-87 , denotes ,
T11816 87-93 NNP denotes United
T11817 94-100 NNP denotes States
T11818 100-101 -RRB- denotes )
T11819 101-103 , denotes ,
T11820 103-109 IN denotes except
T11821 110-113 DT denotes the
T11822 117-123 NN denotes strain
T11823 114-116 NN denotes BA
T11824 124-125 -LRB- denotes (
T11825 154-160 NNP denotes Center
T11826 125-133 NNP denotes Stanford
T11827 134-144 NNP denotes Veterinary
T11828 145-153 NNPS denotes Services
T11829 160-162 , denotes ,
T11830 162-170 NNP denotes Stanford
T11831 170-172 , denotes ,
T11832 172-182 NNP denotes California
T11833 182-184 , denotes ,
T11834 184-190 NNP denotes United
T11835 191-197 NNP denotes States
T11836 197-198 -RRB- denotes )
T11837 198-200 , denotes ,
T11838 200-205 NN denotes Hoxb6
T11839 206-209 NN denotes Cre
T11840 205-206 HYPH denotes -
T11841 221-225 NNS denotes mice
T11842 210-220 JJ denotes transgenic
T11843 226-227 -LRB- denotes (
T11844 227-233 RB denotes kindly
T11845 234-242 VBN denotes provided
T11846 243-245 IN denotes by
T11847 246-248 NNP denotes M.
T11848 249-254 NNP denotes Kuehn
T11849 255-257 IN denotes of
T11850 258-261 DT denotes the
T11851 271-281 NNPS denotes Institutes
T11852 262-270 NNP denotes National
T11853 282-284 IN denotes of
T11854 285-291 NNP denotes Health
T11855 291-293 , denotes ,
T11856 293-301 NNP denotes Bethesda
T11857 301-303 , denotes ,
T11858 303-311 NNP denotes Maryland
T11859 311-313 , denotes ,
T11860 313-319 NNP denotes United
T11861 320-326 NNP denotes States
T11862 326-327 -RRB- denotes )
T11863 327-329 , denotes ,
T11864 329-333 NNS denotes mice
T11865 334-342 VBG denotes carrying
T11866 343-346 DT denotes the
T11867 366-372 NN denotes allele
T11868 347-351 NN denotes R26R
T11869 357-365 NN denotes reporter
T11870 352-356 NN denotes lacZ
T11871 373-374 -LRB- denotes (
T11872 374-380 RB denotes kindly
T11873 381-389 VBN denotes provided
T11874 390-392 IN denotes by
T11875 393-395 NNP denotes P.
T11876 396-403 NNP denotes Soriano
T11877 403-405 , denotes ,
T11878 405-409 NNP denotes Fred
T11879 437-443 NNP denotes Center
T11880 410-420 NNP denotes Hutchinson
T11881 421-427 NNP denotes Cancer
T11882 428-436 NNP denotes Research
T11883 443-445 , denotes ,
T11884 445-452 NNP denotes Seattle
T11885 452-454 , denotes ,
T11886 454-464 NNP denotes Washington
T11887 464-466 , denotes ,
T11888 466-472 NNP denotes United
T11889 473-479 NNP denotes States
T11890 479-480 -RRB- denotes )
T11891 480-482 , denotes ,
T11892 482-485 CC denotes and
T11893 486-491 NN denotes C57BL
T11894 492-494 NN denotes 6J
T11895 491-492 HYPH denotes /
T11896 506-510 NNS denotes mice
T11897 495-496 -LRB- denotes (
T11898 496-498 NN denotes B6
T11899 498-499 -RRB- denotes )
T11900 500-502 NN denotes ae
T11901 503-505 NN denotes ae
T11902 502-503 HYPH denotes /
T11903 511-512 -LRB- denotes (
T11904 512-518 RB denotes kindly
T11905 519-527 VBN denotes provided
T11906 528-530 IN denotes by
T11907 531-533 NNP denotes L.
T11908 534-542 NNP denotes Siracusa
T11909 542-544 , denotes ,
T11910 544-553 NNP denotes Jefferson
T11911 562-569 NNP denotes College
T11912 554-561 NNP denotes Medical
T11913 569-571 , denotes ,
T11914 571-583 NNP denotes Philadelphia
T11915 583-585 , denotes ,
T11916 585-597 NNP denotes Pennsylvania
T11917 597-599 , denotes ,
T11918 599-605 NNP denotes United
T11919 606-612 NNP denotes States
T11920 612-613 -RRB- denotes )
T11921 613-614 . denotes .
T11922 614-737 sentence denotes The deH mutation arose in the 1960s in Harwell, probably on the BN strain background (C. Beechey, personal communication).
T11923 615-618 DT denotes The
T11924 623-631 NN denotes mutation
T11925 619-622 NN denotes deH
T11926 632-637 VBD denotes arose
T11927 638-640 IN denotes in
T11928 641-644 DT denotes the
T11929 645-650 NNS denotes 1960s
T11930 651-653 IN denotes in
T11931 654-661 NNP denotes Harwell
T11932 661-663 , denotes ,
T11933 663-671 RB denotes probably
T11934 672-674 IN denotes on
T11935 675-678 DT denotes the
T11936 689-699 NN denotes background
T11937 679-681 NN denotes BN
T11938 682-688 NN denotes strain
T11939 700-701 -LRB- denotes (
T11940 701-703 NNP denotes C.
T11941 704-711 NNP denotes Beechey
T11942 711-713 , denotes ,
T11943 713-721 JJ denotes personal
T11944 722-735 NN denotes communication
T11945 735-736 -RRB- denotes )
T11946 736-737 . denotes .
T11947 737-938 sentence denotes We obtained deH on a B6/EiC3H background, introduced the at allele from the BTBR strain, and have maintained the line as a mixed deH/+ × deH/+ intercross stock with periodic outcrossing to BTBR or B6.
T11948 738-740 PRP denotes We
T11949 741-749 VBD denotes obtained
T11950 750-753 NN denotes deH
T11951 754-756 IN denotes on
T11952 757-758 DT denotes a
T11953 768-778 NN denotes background
T11954 759-761 NN denotes B6
T11955 762-767 NN denotes EiC3H
T11956 761-762 HYPH denotes /
T11957 778-780 , denotes ,
T11958 780-790 VBD denotes introduced
T11959 791-794 DT denotes the
T11960 798-804 NN denotes allele
T11961 795-797 NN denotes at
T11962 805-809 IN denotes from
T11963 810-813 DT denotes the
T11964 819-825 NN denotes strain
T11965 814-818 NN denotes BTBR
T11966 825-827 , denotes ,
T11967 827-830 CC denotes and
T11968 831-835 VBP denotes have
T11969 836-846 VBN denotes maintained
T11970 847-850 DT denotes the
T11971 851-855 NN denotes line
T11972 856-858 IN denotes as
T11973 859-860 DT denotes a
T11974 892-897 NN denotes stock
T11975 861-866 VBN denotes mixed
T11976 867-870 NN denotes deH
T11977 870-871 HYPH denotes /
T11978 871-872 SYM denotes +
T11979 873-874 SYM denotes ×
T11980 875-878 NN denotes deH
T11981 878-879 HYPH denotes /
T11982 879-880 SYM denotes +
T11983 881-891 JJ denotes intercross
T11984 898-902 IN denotes with
T11985 903-911 JJ denotes periodic
T11986 912-923 NN denotes outcrossing
T11987 924-926 IN denotes to
T11988 927-931 NN denotes BTBR
T11989 932-934 CC denotes or
T11990 935-937 NN denotes B6
T11991 937-938 . denotes .
T11992 938-1002 sentence denotes For timed matings, the morning of the plug was considered E0.5.
T11993 939-942 IN denotes For
T11994 986-996 VBN denotes considered
T11995 943-948 VBN denotes timed
T11996 949-956 NNS denotes matings
T11997 956-958 , denotes ,
T11998 958-961 DT denotes the
T11999 962-969 NN denotes morning
T12000 970-972 IN denotes of
T12001 973-976 DT denotes the
T12002 977-981 NN denotes plug
T12003 982-985 VBD denotes was
T12004 997-1001 NN denotes E0.5
T12005 1001-1002 . denotes .
T12006 1002-1059 sentence denotes Postnatally, the day of birth was considered to be P0.5.
T12007 1003-1014 RB denotes Postnatally
T12008 1037-1047 VBN denotes considered
T12009 1014-1016 , denotes ,
T12010 1016-1019 DT denotes the
T12011 1020-1023 NN denotes day
T12012 1024-1026 IN denotes of
T12013 1027-1032 NN denotes birth
T12014 1033-1036 VBD denotes was
T12015 1048-1050 TO denotes to
T12016 1051-1053 VB denotes be
T12017 1054-1058 NN denotes P0.5
T12018 1058-1059 . denotes .
R8218 T11801 T11802 det All,mice
R8219 T11802 T11803 nsubjpass mice,obtained
R8220 T11804 T11803 auxpass were,obtained
R8221 T11805 T11803 advmod originally,obtained
R8222 T11806 T11803 prep from,obtained
R8223 T11807 T11808 det The,Laboratory
R8224 T11808 T11806 pobj Laboratory,from
R8225 T11809 T11808 compound Jackson,Laboratory
R8226 T11810 T11811 punct (,Harbor
R8227 T11811 T11808 parataxis Harbor,Laboratory
R8228 T11812 T11811 compound Bar,Harbor
R8229 T11813 T11811 punct ", ",Harbor
R8230 T11814 T11811 npadvmod Maine,Harbor
R8231 T11815 T11811 punct ", ",Harbor
R8232 T11816 T11817 compound United,States
R8233 T11817 T11811 npadvmod States,Harbor
R8234 T11818 T11811 punct ),Harbor
R8235 T11819 T11803 punct ", ",obtained
R8236 T11820 T11803 prep except,obtained
R8237 T11821 T11822 det the,strain
R8238 T11822 T11820 pobj strain,except
R8239 T11823 T11822 compound BA,strain
R8240 T11824 T11825 punct (,Center
R8241 T11825 T11822 parataxis Center,strain
R8242 T11826 T11825 compound Stanford,Center
R8243 T11827 T11828 compound Veterinary,Services
R8244 T11828 T11825 compound Services,Center
R8245 T11829 T11825 punct ", ",Center
R8246 T11830 T11825 npadvmod Stanford,Center
R8247 T11831 T11825 punct ", ",Center
R8248 T11832 T11825 npadvmod California,Center
R8249 T11833 T11825 punct ", ",Center
R8250 T11834 T11835 compound United,States
R8251 T11835 T11825 npadvmod States,Center
R8252 T11836 T11825 punct ),Center
R8253 T11837 T11822 punct ", ",strain
R8254 T11838 T11839 nmod Hoxb6,Cre
R8255 T11839 T11841 nmod Cre,mice
R8256 T11840 T11839 punct -,Cre
R8257 T11841 T11822 conj mice,strain
R8258 T11842 T11841 amod transgenic,mice
R8259 T11843 T11841 punct (,mice
R8260 T11844 T11845 advmod kindly,provided
R8261 T11845 T11841 acl provided,mice
R8262 T11846 T11845 agent by,provided
R8263 T11847 T11848 compound M.,Kuehn
R8264 T11848 T11846 pobj Kuehn,by
R8265 T11849 T11848 prep of,Kuehn
R8266 T11850 T11851 det the,Institutes
R8267 T11851 T11849 pobj Institutes,of
R8268 T11852 T11851 compound National,Institutes
R8269 T11853 T11851 prep of,Institutes
R8270 T11854 T11853 pobj Health,of
R8271 T11855 T11851 punct ", ",Institutes
R8272 T11856 T11851 npadvmod Bethesda,Institutes
R8273 T11857 T11851 punct ", ",Institutes
R8274 T11858 T11851 npadvmod Maryland,Institutes
R8275 T11859 T11851 punct ", ",Institutes
R8276 T11860 T11861 compound United,States
R8277 T11861 T11851 npadvmod States,Institutes
R8278 T11862 T11841 punct ),mice
R8279 T11863 T11841 punct ", ",mice
R8280 T11864 T11841 conj mice,mice
R8281 T11865 T11864 acl carrying,mice
R8282 T11866 T11867 det the,allele
R8283 T11867 T11865 dobj allele,carrying
R8284 T11868 T11869 compound R26R,reporter
R8285 T11869 T11867 compound reporter,allele
R8286 T11870 T11869 compound lacZ,reporter
R8287 T11871 T11864 punct (,mice
R8288 T11872 T11873 advmod kindly,provided
R8289 T11873 T11864 acl provided,mice
R8290 T11874 T11873 agent by,provided
R8291 T11875 T11876 compound P.,Soriano
R8292 T11876 T11874 pobj Soriano,by
R8293 T11877 T11876 punct ", ",Soriano
R8294 T11878 T11879 compound Fred,Center
R8295 T11879 T11876 appos Center,Soriano
R8296 T11880 T11879 compound Hutchinson,Center
R8297 T11881 T11882 compound Cancer,Research
R8298 T11882 T11879 compound Research,Center
R8299 T11883 T11879 punct ", ",Center
R8300 T11884 T11879 npadvmod Seattle,Center
R8301 T11885 T11879 punct ", ",Center
R8302 T11886 T11879 npadvmod Washington,Center
R8303 T11887 T11879 punct ", ",Center
R8304 T11888 T11889 compound United,States
R8305 T11889 T11879 npadvmod States,Center
R8306 T11890 T11864 punct ),mice
R8307 T11891 T11864 punct ", ",mice
R8308 T11892 T11864 cc and,mice
R8309 T11893 T11894 nmod C57BL,6J
R8310 T11894 T11896 nmod 6J,mice
R8311 T11895 T11894 punct /,6J
R8312 T11896 T11864 conj mice,mice
R8313 T11897 T11894 punct (,6J
R8314 T11898 T11894 appos B6,6J
R8315 T11899 T11894 punct ),6J
R8316 T11900 T11901 compound ae,ae
R8317 T11901 T11896 compound ae,mice
R8318 T11902 T11901 punct /,ae
R8319 T11903 T11896 punct (,mice
R8320 T11904 T11905 advmod kindly,provided
R8321 T11905 T11896 acl provided,mice
R8322 T11906 T11905 agent by,provided
R8323 T11907 T11908 compound L.,Siracusa
R8324 T11908 T11906 pobj Siracusa,by
R8325 T11909 T11908 punct ", ",Siracusa
R8326 T11910 T11911 compound Jefferson,College
R8327 T11911 T11908 appos College,Siracusa
R8328 T11912 T11911 compound Medical,College
R8329 T11913 T11911 punct ", ",College
R8330 T11914 T11911 npadvmod Philadelphia,College
R8331 T11915 T11911 punct ", ",College
R8332 T11916 T11911 npadvmod Pennsylvania,College
R8333 T11917 T11911 punct ", ",College
R8334 T11918 T11919 compound United,States
R8335 T11919 T11911 npadvmod States,College
R8336 T11920 T11896 punct ),mice
R8337 T11921 T11803 punct .,obtained
R8338 T11923 T11924 det The,mutation
R8339 T11924 T11926 nsubj mutation,arose
R8340 T11925 T11924 compound deH,mutation
R8341 T11927 T11926 prep in,arose
R8342 T11928 T11929 det the,1960s
R8343 T11929 T11927 pobj 1960s,in
R8344 T11930 T11926 prep in,arose
R8345 T11931 T11930 pobj Harwell,in
R8346 T11932 T11926 punct ", ",arose
R8347 T11933 T11934 advmod probably,on
R8348 T11934 T11926 prep on,arose
R8349 T11935 T11936 det the,background
R8350 T11936 T11934 pobj background,on
R8351 T11937 T11938 compound BN,strain
R8352 T11938 T11936 compound strain,background
R8353 T11939 T11940 punct (,C.
R8354 T11940 T11926 meta C.,arose
R8355 T11941 T11940 nmod Beechey,C.
R8356 T11942 T11940 punct ", ",C.
R8357 T11943 T11940 amod personal,C.
R8358 T11944 T11940 nmod communication,C.
R8359 T11945 T11940 punct ),C.
R8360 T11946 T11926 punct .,arose
R8361 T11948 T11949 nsubj We,obtained
R8362 T11950 T11949 dobj deH,obtained
R8363 T11951 T11950 prep on,deH
R8364 T11952 T11953 det a,background
R8365 T11953 T11951 pobj background,on
R8366 T11954 T11955 compound B6,EiC3H
R8367 T11955 T11953 compound EiC3H,background
R8368 T11956 T11955 punct /,EiC3H
R8369 T11957 T11949 punct ", ",obtained
R8370 T11958 T11949 conj introduced,obtained
R8371 T11959 T11960 det the,allele
R8372 T11960 T11958 dobj allele,introduced
R8373 T11961 T11960 compound at,allele
R8374 T11962 T11960 prep from,allele
R8375 T11963 T11964 det the,strain
R8376 T11964 T11962 pobj strain,from
R8377 T11965 T11964 compound BTBR,strain
R8378 T11966 T11958 punct ", ",introduced
R8379 T11967 T11958 cc and,introduced
R8380 T11968 T11969 aux have,maintained
R8381 T11969 T11958 conj maintained,introduced
R8382 T11970 T11971 det the,line
R8383 T11971 T11969 dobj line,maintained
R8384 T11972 T11969 prep as,maintained
R8385 T11973 T11974 det a,stock
R8386 T11974 T11972 pobj stock,as
R8387 T11975 T11974 amod mixed,stock
R8388 T11976 T11974 nmod deH,stock
R8389 T11977 T11976 punct /,deH
R8390 T11978 T11976 punct +,deH
R8391 T11979 T11976 punct ×,deH
R8392 T11980 T11976 appos deH,deH
R8393 T11981 T11980 punct /,deH
R8394 T11982 T11980 punct +,deH
R8395 T11983 T11976 amod intercross,deH
R8396 T11984 T11969 prep with,maintained
R8397 T11985 T11986 amod periodic,outcrossing
R8398 T11986 T11984 pobj outcrossing,with
R8399 T11987 T11986 prep to,outcrossing
R8400 T11988 T11987 pobj BTBR,to
R8401 T11989 T11988 cc or,BTBR
R8402 T11990 T11988 conj B6,BTBR
R8403 T11991 T11949 punct .,obtained
R8404 T11993 T11994 prep For,considered
R8405 T11995 T11996 amod timed,matings
R8406 T11996 T11993 pobj matings,For
R8407 T11997 T11994 punct ", ",considered
R8408 T11998 T11999 det the,morning
R8409 T11999 T11994 nsubjpass morning,considered
R8410 T12000 T11999 prep of,morning
R8411 T12001 T12002 det the,plug
R8412 T12002 T12000 pobj plug,of
R8413 T12003 T11994 auxpass was,considered
R8414 T12004 T11994 oprd E0.5,considered
R8415 T12005 T11994 punct .,considered
R8416 T12007 T12008 advmod Postnatally,considered
R8417 T12009 T12008 punct ", ",considered
R8418 T12010 T12011 det the,day
R8419 T12011 T12008 nsubjpass day,considered
R8420 T12012 T12011 prep of,day
R8421 T12013 T12012 pobj birth,of
R8422 T12014 T12008 auxpass was,considered
R8423 T12015 T12016 aux to,be
R8424 T12016 T12008 xcomp be,considered
R8425 T12017 T12016 attr P0.5,be
R8426 T12018 T12008 punct .,considered

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T11772 9-13 NCBITaxon:10088 denotes mice
T11773 200-205 PR:000008703 denotes Hoxb6
T11774 221-225 NCBITaxon:10088 denotes mice
T11775 329-333 NCBITaxon:10088 denotes mice
T11776 352-356 PR:000033987 denotes lacZ
T11777 366-372 SO:0001023 denotes allele
T11778 506-510 NCBITaxon:10088 denotes mice
T11779 798-804 SO:0001023 denotes allele
T11780 949-956 GO:0007618 denotes matings
T11781 977-981 UBERON:0010148 denotes plug
T11782 1007-1014 GO:0007567 denotes natally
T11783 1027-1032 GO:0007567 denotes birth

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T11784 9-13 NCBITaxon:10088 denotes mice
T11785 200-205 PR_EXT:000008703 denotes Hoxb6
T11786 210-220 SO_EXT:transgenic_entity denotes transgenic
T11787 221-225 NCBITaxon:10088 denotes mice
T11788 329-333 NCBITaxon:10088 denotes mice
T11789 352-356 PR_EXT:000033987 denotes lacZ
T11790 366-372 SO_EXT:0001023 denotes allele
T11791 506-510 NCBITaxon:10088 denotes mice
T11792 623-631 SO_EXT:sequence_alteration_entity_or_process denotes mutation
T11793 798-804 SO_EXT:0001023 denotes allele
T11794 871-872 SO_EXT:normal_or_wild_type_or_present denotes +
T11795 879-880 SO_EXT:normal_or_wild_type_or_present denotes +
T11796 949-956 GO:0007618 denotes matings
T11797 977-981 UBERON:0010148 denotes plug
T11798 1007-1014 GO:0007567 denotes natally
T11799 1027-1032 GO:0007567 denotes birth