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PMC:314463 / 5420-5889 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T1558 0-469 sentence denotes Agouti protein has a short radius of action (Silvers and Russel 1955) and can be switched on and off during a single hair cycle (Bultman et al. 1992, 1994; Miller et al. 1993; Vrieling et al. 1994); thus, its regulated expression is thought to be responsible for the cream-colored or yellow ventral surface of mice carrying the black-and-tan (at) allele and for the yellow markings around the feet, ears, or head, i.e., tan points or head spots, of certain dog breeds.
T1559 1-7 NN denotes Agouti
T1560 8-15 NN denotes protein
T1561 16-19 VBZ denotes has
T1562 234-241 VBN denotes thought
T1563 20-21 DT denotes a
T1564 28-34 NN denotes radius
T1565 22-27 JJ denotes short
T1566 35-37 IN denotes of
T1567 38-44 NN denotes action
T1568 45-46 -LRB- denotes (
T1569 46-53 NNP denotes Silvers
T1570 54-57 CC denotes and
T1571 58-64 NNP denotes Russel
T1572 65-69 CD denotes 1955
T1573 69-70 -RRB- denotes )
T1574 71-74 CC denotes and
T1575 75-78 MD denotes can
T1576 82-90 VBN denotes switched
T1577 79-81 VB denotes be
T1578 91-93 RP denotes on
T1579 94-97 CC denotes and
T1580 98-101 RP denotes off
T1581 102-108 IN denotes during
T1582 109-110 DT denotes a
T1583 123-128 NN denotes cycle
T1584 111-117 JJ denotes single
T1585 118-122 NN denotes hair
T1586 129-130 -LRB- denotes (
T1587 130-137 NNP denotes Bultman
T1588 138-140 FW denotes et
T1589 141-144 FW denotes al.
T1590 145-149 CD denotes 1992
T1591 149-151 , denotes ,
T1592 151-155 CD denotes 1994
T1593 155-156 : denotes ;
T1594 157-163 NNP denotes Miller
T1595 164-166 FW denotes et
T1596 167-170 FW denotes al.
T1597 171-175 CD denotes 1993
T1598 175-176 : denotes ;
T1599 177-185 NNP denotes Vrieling
T1600 186-188 FW denotes et
T1601 189-192 FW denotes al.
T1602 193-197 CD denotes 1994
T1603 197-198 -RRB- denotes )
T1604 198-199 : denotes ;
T1605 200-204 RB denotes thus
T1606 204-206 , denotes ,
T1607 206-209 PRP$ denotes its
T1608 220-230 NN denotes expression
T1609 210-219 VBN denotes regulated
T1610 231-233 VBZ denotes is
T1611 242-244 TO denotes to
T1612 245-247 VB denotes be
T1613 248-259 JJ denotes responsible
T1614 260-263 IN denotes for
T1615 264-267 DT denotes the
T1616 300-307 NN denotes surface
T1617 268-273 NN denotes cream
T1618 274-281 VBN denotes colored
T1619 273-274 HYPH denotes -
T1620 282-284 CC denotes or
T1621 285-291 JJ denotes yellow
T1622 292-299 JJ denotes ventral
T1623 308-310 IN denotes of
T1624 311-315 NNS denotes mice
T1625 316-324 VBG denotes carrying
T1626 325-328 DT denotes the
T1627 348-354 NN denotes allele
T1628 329-334 JJ denotes black
T1629 334-335 HYPH denotes -
T1630 335-338 CC denotes and
T1631 338-339 HYPH denotes -
T1632 339-342 JJ denotes tan
T1633 343-344 -LRB- denotes (
T1634 344-346 NN denotes at
T1635 346-347 -RRB- denotes )
T1636 355-358 CC denotes and
T1637 359-362 IN denotes for
T1638 363-366 DT denotes the
T1639 374-382 NNS denotes markings
T1640 367-373 JJ denotes yellow
T1641 383-389 IN denotes around
T1642 390-393 DT denotes the
T1643 394-398 NNS denotes feet
T1644 398-400 , denotes ,
T1645 400-404 NNS denotes ears
T1646 404-406 , denotes ,
T1647 406-408 CC denotes or
T1648 409-413 NN denotes head
T1649 413-415 , denotes ,
T1650 415-419 FW denotes i.e.
T1651 425-431 NNS denotes points
T1652 419-421 , denotes ,
T1653 421-424 JJ denotes tan
T1654 432-434 CC denotes or
T1655 435-439 NN denotes head
T1656 440-445 NNS denotes spots
T1657 445-447 , denotes ,
T1658 447-449 IN denotes of
T1659 450-457 JJ denotes certain
T1660 462-468 NNS denotes breeds
T1661 458-461 NN denotes dog
T1662 468-469 . denotes .
R869 T1564 T1561 dobj radius,has
R870 T1565 T1564 amod short,radius
R881 T1576 T1561 conj switched,has
R882 T1577 T1576 auxpass be,switched
R888 T1583 T1581 pobj cycle,during
R889 T1584 T1583 amod single,cycle
R890 T1585 T1583 compound hair,cycle
R913 T1608 T1562 nsubjpass expression,thought
R914 T1609 T1608 amod regulated,expression
R921 T1616 T1614 pobj surface,for
R922 T1617 T1618 npadvmod cream,colored
R924 T1619 T1618 punct -,colored
R925 T1620 T1618 cc or,colored
R926 T1621 T1618 conj yellow,colored
R927 T1622 T1616 amod ventral,surface
R932 T1627 T1625 dobj allele,carrying
R933 T1628 T1627 amod black,allele
R934 T1629 T1628 punct -,black
R935 T1630 T1628 cc and,black
R936 T1631 T1632 punct -,tan
R937 T1632 T1628 conj tan,black
R938 T1633 T1634 punct (,at
R939 T1634 T1627 parataxis at,allele
R940 T1635 T1634 punct ),at
R944 T1639 T1637 pobj markings,for
R945 T1640 T1639 amod yellow,markings
R956 T1651 T1639 appos points,markings
R957 T1652 T1651 punct ", ",points
R958 T1653 T1651 amod tan,points
R965 T1660 T1658 pobj breeds,of
R966 T1661 T1660 compound dog,breeds
R865 T1559 T1560 compound Agouti,protein
R866 T1560 T1561 nsubj protein,has
R867 T1561 T1562 ccomp has,thought
R868 T1563 T1564 det a,radius
R871 T1566 T1564 prep of,radius
R872 T1567 T1566 pobj action,of
R873 T1568 T1569 punct (,Silvers
R874 T1569 T1564 meta Silvers,radius
R875 T1570 T1569 cc and,Silvers
R876 T1571 T1569 conj Russel,Silvers
R877 T1572 T1571 nummod 1955,Russel
R878 T1573 T1571 punct ),Russel
R879 T1574 T1561 cc and,has
R880 T1575 T1576 aux can,switched
R883 T1578 T1576 prt on,switched
R884 T1579 T1578 cc and,on
R885 T1580 T1578 conj off,on
R886 T1581 T1576 prep during,switched
R887 T1582 T1583 det a,cycle
R891 T1586 T1587 punct (,Bultman
R892 T1587 T1576 meta Bultman,switched
R893 T1588 T1587 nmod et,Bultman
R894 T1589 T1587 nmod al.,Bultman
R895 T1590 T1587 nummod 1992,Bultman
R896 T1591 T1587 punct ", ",Bultman
R897 T1592 T1587 nummod 1994,Bultman
R898 T1593 T1587 punct ;,Bultman
R899 T1594 T1587 nmod Miller,Bultman
R900 T1595 T1587 nmod et,Bultman
R901 T1596 T1587 nmod al.,Bultman
R902 T1597 T1587 nummod 1993,Bultman
R903 T1598 T1587 punct ;,Bultman
R904 T1599 T1587 nmod Vrieling,Bultman
R905 T1600 T1587 nmod et,Bultman
R906 T1601 T1587 nmod al.,Bultman
R907 T1602 T1587 nummod 1994,Bultman
R908 T1603 T1587 punct ),Bultman
R909 T1604 T1562 punct ;,thought
R910 T1605 T1562 advmod thus,thought
R911 T1606 T1562 punct ", ",thought
R912 T1607 T1608 poss its,expression
R915 T1610 T1562 auxpass is,thought
R916 T1611 T1612 aux to,be
R917 T1612 T1562 xcomp be,thought
R918 T1613 T1612 acomp responsible,be
R919 T1614 T1613 prep for,responsible
R920 T1615 T1616 det the,surface
R923 T1618 T1616 amod colored,surface
R928 T1623 T1616 prep of,surface
R929 T1624 T1623 pobj mice,of
R930 T1625 T1624 acl carrying,mice
R931 T1626 T1627 det the,allele
R941 T1636 T1614 cc and,for
R942 T1637 T1614 conj for,for
R943 T1638 T1639 det the,markings
R946 T1641 T1639 prep around,markings
R947 T1642 T1643 det the,feet
R948 T1643 T1641 pobj feet,around
R949 T1644 T1643 punct ", ",feet
R950 T1645 T1643 conj ears,feet
R951 T1646 T1645 punct ", ",ears
R952 T1647 T1645 cc or,ears
R953 T1648 T1645 conj head,ears
R954 T1649 T1639 punct ", ",markings
R955 T1650 T1651 advmod i.e.,points
R959 T1654 T1651 cc or,points
R960 T1655 T1656 compound head,spots
R961 T1656 T1651 conj spots,points
R962 T1657 T1639 punct ", ",markings
R963 T1658 T1639 prep of,markings
R964 T1659 T1660 amod certain,breeds
R967 T1662 T1562 punct .,thought

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T698 1-7 PR:000004372 denotes Agouti
T699 118-122 UBERON:0001037 denotes hair
T700 118-128 GO:0042633 denotes hair cycle
T701 210-219 GO:0065007 denotes regulated
T702 220-230 GO:0010467 denotes expression
T703 311-315 NCBITaxon:10088 denotes mice
T704 348-354 SO:0001023 denotes allele
T705 374-382 UBERON:2002284 denotes markings
T706 394-398 UBERON:0002387 denotes feet
T707 400-404 UBERON:0001690 denotes ears
T708 409-413 UBERON:0000033 denotes head
T709 435-439 UBERON:0000033 denotes head
T710 440-445 UBERON:2002283 denotes spots
T711 458-461 NCBITaxon:9615 denotes dog

2_test

Id Subject Object Predicate Lexical cue
14737183-1473152-84902975 145-149 1473152 denotes 1992
14737183-8125260-84902976 151-155 8125260 denotes 1994
14737183-8449404-84902977 171-175 8449404 denotes 1993
14737183-8202545-84902978 193-197 8202545 denotes 1994
T6949 145-149 1473152 denotes 1992
T43422 151-155 8125260 denotes 1994
T12254 171-175 8449404 denotes 1993
T38266 193-197 8202545 denotes 1994

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T874 1-7 PR_EXT:000004372 denotes Agouti
T875 8-15 CHEBI_PR_EXT:protein denotes protein
T876 118-122 UBERON:0001037 denotes hair
T877 118-128 GO:0042633 denotes hair cycle
T878 210-219 GO:0065007 denotes regulated
T879 220-230 GO:0010467 denotes expression
T880 311-315 NCBITaxon:10088 denotes mice
T881 348-354 SO_EXT:0001023 denotes allele
T882 374-382 UBERON:2002284 denotes markings
T883 394-398 UBERON:0002387 denotes feet
T884 400-404 UBERON:0001690 denotes ears
T885 409-413 UBERON:0000033 denotes head
T886 435-439 UBERON:0000033 denotes head
T887 440-445 UBERON:2002283 denotes spots
T888 458-461 NCBITaxon:9615 denotes dog