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PMC:314463 / 54023-55075 JSONTXT

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Id Subject Object Predicate Lexical cue
T11586 0-3 DT denotes The
T11587 4-10 NN denotes effect
T11588 55-57 VBZ denotes is
T11589 11-13 IN denotes of
T11590 14-19 NN denotes Tbx15
T11591 20-22 IN denotes on
T11592 23-35 NN denotes pigmentation
T11593 36-38 IN denotes in
T11594 39-49 NN denotes laboratory
T11595 50-54 NNS denotes mice
T11596 58-69 JJ denotes reminiscent
T11597 70-72 IN denotes of
T11598 73-77 NN denotes coat
T11599 78-83 NN denotes color
T11600 77-78 HYPH denotes -
T11601 84-92 NNS denotes patterns
T11602 93-95 IN denotes in
T11603 96-100 CC denotes both
T11604 101-109 JJ denotes selected
T11605 122-133 NNS denotes populations
T11606 110-113 CC denotes and
T11607 114-121 JJ denotes natural
T11608 134-136 IN denotes of
T11609 137-142 JJ denotes other
T11610 143-150 NNS denotes mammals
T11611 150-151 . denotes .
T11612 151-455 sentence denotes Saddle markings are common in some dog breeds, such as German shepherds, and in certain populations of Peromyscus polionotus, in which a dorsal extension of ventral depigmentation provides an adaptive advantage to subspecies that live on white sand reefs (Blair 1951; Kaufman 1974; Belk and Smith 1996).
T11613 152-158 NN denotes Saddle
T11614 159-167 NNS denotes markings
T11615 168-171 VBP denotes are
T11616 172-178 JJ denotes common
T11617 179-181 IN denotes in
T11618 182-186 DT denotes some
T11619 191-197 NNS denotes breeds
T11620 187-190 NN denotes dog
T11621 197-199 , denotes ,
T11622 199-203 JJ denotes such
T11623 204-206 IN denotes as
T11624 207-213 NNP denotes German
T11625 214-223 NNS denotes shepherds
T11626 223-225 , denotes ,
T11627 225-228 CC denotes and
T11628 229-231 IN denotes in
T11629 232-239 JJ denotes certain
T11630 240-251 NNS denotes populations
T11631 252-254 IN denotes of
T11632 255-265 NNP denotes Peromyscus
T11633 266-276 NNP denotes polionotus
T11634 276-278 , denotes ,
T11635 278-280 IN denotes in
T11636 332-340 VBZ denotes provides
T11637 281-286 WDT denotes which
T11638 287-288 DT denotes a
T11639 296-305 NN denotes extension
T11640 289-295 JJ denotes dorsal
T11641 306-308 IN denotes of
T11642 309-316 JJ denotes ventral
T11643 317-331 NN denotes depigmentation
T11644 341-343 DT denotes an
T11645 353-362 NN denotes advantage
T11646 344-352 JJ denotes adaptive
T11647 363-365 IN denotes to
T11648 366-376 NNS denotes subspecies
T11649 377-381 WDT denotes that
T11650 382-386 VBP denotes live
T11651 387-389 IN denotes on
T11652 390-395 JJ denotes white
T11653 401-406 NNS denotes reefs
T11654 396-400 NN denotes sand
T11655 407-408 -LRB- denotes (
T11656 408-413 NNP denotes Blair
T11657 414-418 CD denotes 1951
T11658 418-419 : denotes ;
T11659 420-427 NNP denotes Kaufman
T11660 428-432 CD denotes 1974
T11661 432-433 : denotes ;
T11662 434-438 NNP denotes Belk
T11663 439-442 CC denotes and
T11664 443-448 NNP denotes Smith
T11665 449-453 CD denotes 1996
T11666 453-454 -RRB- denotes )
T11667 454-455 . denotes .
T11668 455-679 sentence denotes Neither German shepherds nor deer mice have craniofacial characteristics similar to the deH mutation, but the pigmentation patterns in these animals could represent alterations in the regulation or action of Tbx15 activity.
T11669 456-463 CC denotes Neither
T11670 471-480 NNS denotes shepherds
T11671 464-470 NNP denotes German
T11672 495-499 VBP denotes have
T11673 481-484 CC denotes nor
T11674 485-489 NN denotes deer
T11675 490-494 NNS denotes mice
T11676 500-512 JJ denotes craniofacial
T11677 513-528 NNS denotes characteristics
T11678 529-536 JJ denotes similar
T11679 537-539 IN denotes to
T11680 540-543 DT denotes the
T11681 548-556 NN denotes mutation
T11682 544-547 NN denotes deH
T11683 556-558 , denotes ,
T11684 558-561 CC denotes but
T11685 562-565 DT denotes the
T11686 579-587 NNS denotes patterns
T11687 566-578 NN denotes pigmentation
T11688 611-620 VB denotes represent
T11689 588-590 IN denotes in
T11690 591-596 DT denotes these
T11691 597-604 NNS denotes animals
T11692 605-610 MD denotes could
T11693 621-632 NNS denotes alterations
T11694 633-635 IN denotes in
T11695 636-639 DT denotes the
T11696 640-650 NN denotes regulation
T11697 651-653 CC denotes or
T11698 654-660 NN denotes action
T11699 661-663 IN denotes of
T11700 664-669 NN denotes Tbx15
T11701 670-678 NN denotes activity
T11702 678-679 . denotes .
T11703 679-881 sentence denotes From the opposite perspective, the effects of Tbx15 on coat color are only apparent in certain genetic backgrounds and may not be evident at all in mammals that lack dorsoventral pigmentation patterns.
T11704 680-684 IN denotes From
T11705 746-749 VBP denotes are
T11706 685-688 DT denotes the
T11707 698-709 NN denotes perspective
T11708 689-697 JJ denotes opposite
T11709 709-711 , denotes ,
T11710 711-714 DT denotes the
T11711 715-722 NNS denotes effects
T11712 723-725 IN denotes of
T11713 726-731 NN denotes Tbx15
T11714 732-734 IN denotes on
T11715 735-739 NN denotes coat
T11716 740-745 NN denotes color
T11717 750-754 RB denotes only
T11718 755-763 JJ denotes apparent
T11719 764-766 IN denotes in
T11720 767-774 JJ denotes certain
T11721 783-794 NNS denotes backgrounds
T11722 775-782 JJ denotes genetic
T11723 795-798 CC denotes and
T11724 799-802 MD denotes may
T11725 807-809 VB denotes be
T11726 803-806 RB denotes not
T11727 810-817 JJ denotes evident
T11728 818-820 RB denotes at
T11729 821-824 RB denotes all
T11730 825-827 IN denotes in
T11731 828-835 NNS denotes mammals
T11732 836-840 WDT denotes that
T11733 841-845 VBP denotes lack
T11734 846-858 JJ denotes dorsoventral
T11735 872-880 NNS denotes patterns
T11736 859-871 NN denotes pigmentation
T11737 880-881 . denotes .
T11738 881-1052 sentence denotes Studying the sequence and expression of Tbx15 in other vertebrates may provide additional insight into patterns that affect the skeleton as well as the pigmentary system.
T11739 882-890 VBG denotes Studying
T11740 953-960 VB denotes provide
T11741 891-894 DT denotes the
T11742 895-903 NN denotes sequence
T11743 904-907 CC denotes and
T11744 908-918 NN denotes expression
T11745 919-921 IN denotes of
T11746 922-927 NN denotes Tbx15
T11747 928-930 IN denotes in
T11748 931-936 JJ denotes other
T11749 937-948 NNS denotes vertebrates
T11750 949-952 MD denotes may
T11751 961-971 JJ denotes additional
T11752 972-979 NN denotes insight
T11753 980-984 IN denotes into
T11754 985-993 NNS denotes patterns
T11755 994-998 WDT denotes that
T11756 999-1005 VBP denotes affect
T11757 1006-1009 DT denotes the
T11758 1010-1018 NN denotes skeleton
T11759 1019-1021 RB denotes as
T11760 1027-1029 IN denotes as
T11761 1022-1026 RB denotes well
T11762 1030-1033 DT denotes the
T11763 1045-1051 NN denotes system
T11764 1034-1044 JJ denotes pigmentary
T11765 1051-1052 . denotes .
R8047 T11586 T11587 det The,effect
R8048 T11587 T11588 nsubj effect,is
R8049 T11589 T11587 prep of,effect
R8050 T11590 T11589 pobj Tbx15,of
R8051 T11591 T11587 prep on,effect
R8052 T11592 T11591 pobj pigmentation,on
R8053 T11593 T11587 prep in,effect
R8054 T11594 T11595 compound laboratory,mice
R8055 T11595 T11593 pobj mice,in
R8056 T11596 T11588 acomp reminiscent,is
R8057 T11597 T11596 prep of,reminiscent
R8058 T11598 T11599 compound coat,color
R8059 T11599 T11601 compound color,patterns
R8060 T11600 T11599 punct -,color
R8061 T11601 T11597 pobj patterns,of
R8062 T11602 T11601 prep in,patterns
R8063 T11603 T11604 preconj both,selected
R8064 T11604 T11605 amod selected,populations
R8065 T11605 T11602 pobj populations,in
R8066 T11606 T11604 cc and,selected
R8067 T11607 T11604 conj natural,selected
R8068 T11608 T11605 prep of,populations
R8069 T11609 T11610 amod other,mammals
R8070 T11610 T11608 pobj mammals,of
R8071 T11611 T11588 punct .,is
R8072 T11613 T11614 compound Saddle,markings
R8073 T11614 T11615 nsubj markings,are
R8074 T11616 T11615 acomp common,are
R8075 T11617 T11615 prep in,are
R8076 T11618 T11619 det some,breeds
R8077 T11619 T11617 pobj breeds,in
R8078 T11620 T11619 compound dog,breeds
R8079 T11621 T11619 punct ", ",breeds
R8080 T11622 T11623 amod such,as
R8081 T11623 T11619 prep as,breeds
R8082 T11624 T11625 compound German,shepherds
R8083 T11625 T11623 pobj shepherds,as
R8084 T11626 T11617 punct ", ",in
R8085 T11627 T11617 cc and,in
R8086 T11628 T11617 conj in,in
R8087 T11629 T11630 amod certain,populations
R8088 T11630 T11628 pobj populations,in
R8089 T11631 T11630 prep of,populations
R8090 T11632 T11633 compound Peromyscus,polionotus
R8091 T11633 T11631 pobj polionotus,of
R8092 T11634 T11630 punct ", ",populations
R8093 T11635 T11636 prep in,provides
R8094 T11636 T11630 relcl provides,populations
R8095 T11637 T11635 pobj which,in
R8096 T11638 T11639 det a,extension
R8097 T11639 T11636 nsubj extension,provides
R8098 T11640 T11639 amod dorsal,extension
R8099 T11641 T11639 prep of,extension
R8100 T11642 T11643 amod ventral,depigmentation
R8101 T11643 T11641 pobj depigmentation,of
R8102 T11644 T11645 det an,advantage
R8103 T11645 T11636 dobj advantage,provides
R8104 T11646 T11645 amod adaptive,advantage
R8105 T11647 T11636 dative to,provides
R8106 T11648 T11647 pobj subspecies,to
R8107 T11649 T11650 dep that,live
R8108 T11650 T11648 relcl live,subspecies
R8109 T11651 T11650 prep on,live
R8110 T11652 T11653 amod white,reefs
R8111 T11653 T11651 pobj reefs,on
R8112 T11654 T11653 compound sand,reefs
R8113 T11655 T11656 punct (,Blair
R8114 T11656 T11615 meta Blair,are
R8115 T11657 T11656 nummod 1951,Blair
R8116 T11658 T11656 punct ;,Blair
R8117 T11659 T11656 conj Kaufman,Blair
R8118 T11660 T11659 nummod 1974,Kaufman
R8119 T11661 T11659 punct ;,Kaufman
R8120 T11662 T11659 conj Belk,Kaufman
R8121 T11663 T11662 cc and,Belk
R8122 T11664 T11662 conj Smith,Belk
R8123 T11665 T11664 nummod 1996,Smith
R8124 T11666 T11664 punct ),Smith
R8125 T11667 T11615 punct .,are
R8126 T11669 T11670 preconj Neither,shepherds
R8127 T11670 T11672 nsubj shepherds,have
R8128 T11671 T11670 compound German,shepherds
R8129 T11673 T11670 cc nor,shepherds
R8130 T11674 T11675 compound deer,mice
R8131 T11675 T11670 conj mice,shepherds
R8132 T11676 T11677 amod craniofacial,characteristics
R8133 T11677 T11672 dobj characteristics,have
R8134 T11678 T11677 amod similar,characteristics
R8135 T11679 T11678 prep to,similar
R8136 T11680 T11681 det the,mutation
R8137 T11681 T11679 pobj mutation,to
R8138 T11682 T11681 compound deH,mutation
R8139 T11683 T11672 punct ", ",have
R8140 T11684 T11672 cc but,have
R8141 T11685 T11686 det the,patterns
R8142 T11686 T11688 nsubj patterns,represent
R8143 T11687 T11686 compound pigmentation,patterns
R8144 T11688 T11672 conj represent,have
R8145 T11689 T11686 prep in,patterns
R8146 T11690 T11691 det these,animals
R8147 T11691 T11689 pobj animals,in
R8148 T11692 T11688 aux could,represent
R8149 T11693 T11688 dobj alterations,represent
R8150 T11694 T11693 prep in,alterations
R8151 T11695 T11696 det the,regulation
R8152 T11696 T11694 pobj regulation,in
R8153 T11697 T11696 cc or,regulation
R8154 T11698 T11696 conj action,regulation
R8155 T11699 T11696 prep of,regulation
R8156 T11700 T11701 compound Tbx15,activity
R8157 T11701 T11699 pobj activity,of
R8158 T11702 T11688 punct .,represent
R8159 T11704 T11705 prep From,are
R8160 T11706 T11707 det the,perspective
R8161 T11707 T11704 pobj perspective,From
R8162 T11708 T11707 amod opposite,perspective
R8163 T11709 T11705 punct ", ",are
R8164 T11710 T11711 det the,effects
R8165 T11711 T11705 nsubj effects,are
R8166 T11712 T11711 prep of,effects
R8167 T11713 T11712 pobj Tbx15,of
R8168 T11714 T11711 prep on,effects
R8169 T11715 T11716 compound coat,color
R8170 T11716 T11714 pobj color,on
R8171 T11717 T11705 advmod only,are
R8172 T11718 T11705 acomp apparent,are
R8173 T11719 T11705 prep in,are
R8174 T11720 T11721 amod certain,backgrounds
R8175 T11721 T11719 pobj backgrounds,in
R8176 T11722 T11721 amod genetic,backgrounds
R8177 T11723 T11705 cc and,are
R8178 T11724 T11725 aux may,be
R8179 T11725 T11705 conj be,are
R8180 T11726 T11725 neg not,be
R8181 T11727 T11725 acomp evident,be
R8182 T11728 T11729 advmod at,all
R8183 T11729 T11725 advmod all,be
R8184 T11730 T11725 prep in,be
R8185 T11731 T11730 pobj mammals,in
R8186 T11732 T11733 dep that,lack
R8187 T11733 T11731 relcl lack,mammals
R8188 T11734 T11735 amod dorsoventral,patterns
R8189 T11735 T11733 dobj patterns,lack
R8190 T11736 T11735 compound pigmentation,patterns
R8191 T11737 T11705 punct .,are
R8192 T11739 T11740 csubj Studying,provide
R8193 T11741 T11742 det the,sequence
R8194 T11742 T11739 dobj sequence,Studying
R8195 T11743 T11742 cc and,sequence
R8196 T11744 T11742 conj expression,sequence
R8197 T11745 T11742 prep of,sequence
R8198 T11746 T11745 pobj Tbx15,of
R8199 T11747 T11739 prep in,Studying
R8200 T11748 T11749 amod other,vertebrates
R8201 T11749 T11747 pobj vertebrates,in
R8202 T11750 T11740 aux may,provide
R8203 T11751 T11752 amod additional,insight
R8204 T11752 T11740 dobj insight,provide
R8205 T11753 T11752 prep into,insight
R8206 T11754 T11753 pobj patterns,into
R8207 T11755 T11756 dep that,affect
R8208 T11756 T11754 relcl affect,patterns
R8209 T11757 T11758 det the,skeleton
R8210 T11758 T11756 dobj skeleton,affect
R8211 T11759 T11760 advmod as,as
R8212 T11760 T11758 cc as,skeleton
R8213 T11761 T11760 advmod well,as
R8214 T11762 T11763 det the,system
R8215 T11763 T11758 conj system,skeleton
R8216 T11764 T11763 amod pigmentary,system
R8217 T11765 T11740 punct .,provide

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T11215 14-19 PR:000016145 denotes Tbx15
T11216 50-54 NCBITaxon:10088 denotes mice
T11217 73-77 UBERON:0010166 denotes coat
T11218 143-150 NCBITaxon:40674 denotes mammals
T11219 159-167 UBERON:2002284 denotes markings
T11220 187-190 NCBITaxon:9615 denotes dog
T11221 255-276 NCBITaxon:42413 denotes Peromyscus polionotus
T11222 366-376 NCBITaxon:subspecies denotes subspecies
T11223 485-494 NCBITaxon:10040 denotes deer mice
T11224 597-604 NCBITaxon:33208 denotes animals
T11225 640-650 GO:0065007 denotes regulation
T11226 664-669 PR:000016145 denotes Tbx15
T11227 726-731 PR:000016145 denotes Tbx15
T11228 735-739 UBERON:0010166 denotes coat
T11229 775-782 SO:0000704 denotes genetic
T11230 828-835 NCBITaxon:40674 denotes mammals
T11231 908-918 GO:0010467 denotes expression
T11232 922-927 PR:000016145 denotes Tbx15
T11233 937-948 NCBITaxon:7742 denotes vertebrates
T11234 1010-1018 UBERON:0004288 denotes skeleton
T11235 1034-1044 CHEBI:26130 denotes pigmentary

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T11277 14-19 PR_EXT:000016145 denotes Tbx15
T11278 23-35 GO_PATO_EXT:biological_pigmentation_process_or_quality denotes pigmentation
T11279 50-54 NCBITaxon:10088 denotes mice
T11280 73-77 UBERON:0010166 denotes coat
T11281 143-150 NCBITaxon:40674 denotes mammals
T11282 159-167 UBERON:2002284 denotes markings
T11283 187-190 NCBITaxon:9615 denotes dog
T11284 255-276 NCBITaxon:42413 denotes Peromyscus polionotus
T11285 319-331 GO_PATO_EXT:biological_pigmentation_process_or_quality denotes pigmentation
T11286 366-376 NCBITaxon:subspecies denotes subspecies
T11287 485-494 NCBITaxon:10040 denotes deer mice
T11288 500-512 UBERON_EXT:face_or_skull denotes craniofacial
T11289 548-556 SO_EXT:sequence_alteration_entity_or_process denotes mutation
T11290 566-578 GO_PATO_EXT:biological_pigmentation_process_or_quality denotes pigmentation
T11291 597-604 NCBITaxon:33208 denotes animals
T11292 640-650 GO:0065007 denotes regulation
T11293 664-669 PR_EXT:000016145 denotes Tbx15
T11294 726-731 PR_EXT:000016145 denotes Tbx15
T11295 735-739 UBERON:0010166 denotes coat
T11296 775-782 SO_EXT:0000704 denotes genetic
T11297 828-835 NCBITaxon:40674 denotes mammals
T11298 859-871 GO_PATO_EXT:biological_pigmentation_process_or_quality denotes pigmentation
T11299 895-903 SO_EXT:biological_sequence denotes sequence
T11300 908-918 GO:0010467 denotes expression
T11301 922-927 PR_EXT:000016145 denotes Tbx15
T11302 937-948 NCBITaxon:7742 denotes vertebrates
T11303 1010-1018 UBERON:0004288 denotes skeleton
T11304 1034-1044 CHEBI_EXT:26130 denotes pigmentary