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PMC:314463 / 32765-33628 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T6898 0-3 DT denotes The
T6899 15-20 NN denotes notch
T6900 4-14 JJ denotes ectodermal
T6901 100-102 VBZ denotes is
T6902 21-25 WDT denotes that
T6903 29-33 VBD denotes used
T6904 26-28 PRP denotes we
T6905 34-36 TO denotes to
T6906 37-41 VB denotes mark
T6907 42-45 DT denotes the
T6908 46-54 NN denotes boundary
T6909 55-62 IN denotes between
T6910 63-72 JJ denotes embryonic
T6911 73-79 NN denotes dorsum
T6912 80-83 CC denotes and
T6913 84-93 JJ denotes embryonic
T6914 94-99 NN denotes flank
T6915 103-104 DT denotes a
T6916 120-127 NN denotes feature
T6917 105-119 JJ denotes characteristic
T6918 128-130 IN denotes in
T6919 131-141 NN denotes vertebrate
T6920 142-149 NNS denotes embryos
T6921 149-150 . denotes .
T6922 150-493 sentence denotes In cell lineage studies carried out in the chick system, the notch serves as a landmark for the boundary between dermis derived from somitic mesoderm and dermis derived from lateral plate mesoderm and has been termed the “lateral somitic frontier” (Olivera-Martinez et al. 2000; Sudo et al. 2001; Burke and Nowicki 2003; Nowicki et al. 2003).
T6923 151-153 IN denotes In
T6924 218-224 VBZ denotes serves
T6925 154-158 NN denotes cell
T6926 167-174 NNS denotes studies
T6927 159-166 NN denotes lineage
T6928 175-182 VBN denotes carried
T6929 183-186 RP denotes out
T6930 187-189 IN denotes in
T6931 190-193 DT denotes the
T6932 200-206 NN denotes system
T6933 194-199 NN denotes chick
T6934 206-208 , denotes ,
T6935 208-211 DT denotes the
T6936 212-217 NN denotes notch
T6937 225-227 IN denotes as
T6938 228-229 DT denotes a
T6939 230-238 NN denotes landmark
T6940 239-242 IN denotes for
T6941 243-246 DT denotes the
T6942 247-255 NN denotes boundary
T6943 256-263 IN denotes between
T6944 264-270 NN denotes dermis
T6945 271-278 VBN denotes derived
T6946 279-283 IN denotes from
T6947 284-291 JJ denotes somitic
T6948 292-300 NN denotes mesoderm
T6949 301-304 CC denotes and
T6950 305-311 NN denotes dermis
T6951 312-319 VBN denotes derived
T6952 320-324 IN denotes from
T6953 325-332 JJ denotes lateral
T6954 333-338 NN denotes plate
T6955 339-347 NN denotes mesoderm
T6956 348-351 CC denotes and
T6957 352-355 VBZ denotes has
T6958 361-367 VBN denotes termed
T6959 356-360 VBN denotes been
T6960 368-371 DT denotes the
T6961 389-397 NN denotes frontier
T6962 372-373 `` denotes “
T6963 373-380 JJ denotes lateral
T6964 381-388 JJ denotes somitic
T6965 397-398 '' denotes ”
T6966 399-400 -LRB- denotes (
T6967 400-407 NNP denotes Olivera
T6968 407-408 HYPH denotes -
T6969 408-416 NNP denotes Martinez
T6970 417-419 FW denotes et
T6971 420-423 FW denotes al.
T6972 424-428 CD denotes 2000
T6973 428-429 : denotes ;
T6974 430-434 NNP denotes Sudo
T6975 435-437 FW denotes et
T6976 438-441 FW denotes al.
T6977 442-446 CD denotes 2001
T6978 446-447 : denotes ;
T6979 448-453 NNP denotes Burke
T6980 454-457 CC denotes and
T6981 458-465 NNP denotes Nowicki
T6982 466-470 CD denotes 2003
T6983 470-471 : denotes ;
T6984 472-479 NNP denotes Nowicki
T6985 480-482 FW denotes et
T6986 483-486 FW denotes al.
T6987 487-491 CD denotes 2003
T6988 491-492 -RRB- denotes )
T6989 492-493 . denotes .
T6990 493-720 sentence denotes Although fate-mapping studies have not been carried out in mammalian embryos, somite- and lateral plate-derived mesoderm could give rise to precursors for dermis dorsal and ventral to the limb–body wall junction, respectively.
T6991 494-502 IN denotes Although
T6992 538-545 VBN denotes carried
T6993 503-507 NN denotes fate
T6994 508-515 VBG denotes mapping
T6995 507-508 HYPH denotes -
T6996 516-523 NNS denotes studies
T6997 524-528 VBP denotes have
T6998 529-532 RB denotes not
T6999 533-537 VBN denotes been
T7000 621-625 VB denotes give
T7001 546-549 RP denotes out
T7002 550-552 IN denotes in
T7003 553-562 JJ denotes mammalian
T7004 563-570 NNS denotes embryos
T7005 570-572 , denotes ,
T7006 572-578 NN denotes somite
T7007 598-605 VBN denotes derived
T7008 578-579 HYPH denotes -
T7009 580-583 CC denotes and
T7010 584-591 JJ denotes lateral
T7011 592-597 NN denotes plate
T7012 597-598 HYPH denotes -
T7013 606-614 NN denotes mesoderm
T7014 615-620 MD denotes could
T7015 626-630 NN denotes rise
T7016 631-633 IN denotes to
T7017 634-644 NNS denotes precursors
T7018 645-648 IN denotes for
T7019 649-655 NN denotes dermis
T7020 656-662 JJ denotes dorsal
T7021 663-666 CC denotes and
T7022 667-674 JJ denotes ventral
T7023 675-677 IN denotes to
T7024 678-681 DT denotes the
T7025 697-705 NN denotes junction
T7026 682-686 NN denotes limb
T7027 686-687 HYPH denotes –
T7028 687-691 NN denotes body
T7029 692-696 NN denotes wall
T7030 705-707 , denotes ,
T7031 707-719 RB denotes respectively
T7032 719-720 . denotes .
T7033 720-863 sentence denotes However, this notion conflicts with our observation that the future pigmentation boundary lies ventral to the ectodermal notch (see Figure 7).
T7034 721-728 RB denotes However
T7035 742-751 VBZ denotes conflicts
T7036 728-730 , denotes ,
T7037 730-734 DT denotes this
T7038 735-741 NN denotes notion
T7039 752-756 IN denotes with
T7040 757-760 PRP$ denotes our
T7041 761-772 NN denotes observation
T7042 773-777 IN denotes that
T7043 811-815 VBZ denotes lies
T7044 778-781 DT denotes the
T7045 802-810 NN denotes boundary
T7046 782-788 JJ denotes future
T7047 789-801 NN denotes pigmentation
T7048 816-823 RB denotes ventral
T7049 824-826 IN denotes to
T7050 827-830 DT denotes the
T7051 842-847 NN denotes notch
T7052 831-841 JJ denotes ectodermal
T7053 848-849 -LRB- denotes (
T7054 849-852 VB denotes see
T7055 853-859 NN denotes Figure
T7056 860-861 CD denotes 7
T7057 861-862 -RRB- denotes )
T7058 862-863 . denotes .
R4689 T6898 T6899 det The,notch
R4690 T6899 T6901 nsubj notch,is
R4691 T6900 T6899 amod ectodermal,notch
R4692 T6902 T6903 dep that,used
R4693 T6903 T6899 relcl used,notch
R4694 T6904 T6903 nsubj we,used
R4695 T6905 T6906 aux to,mark
R4696 T6906 T6903 advcl mark,used
R4697 T6907 T6908 det the,boundary
R4698 T6908 T6906 dobj boundary,mark
R4699 T6909 T6908 prep between,boundary
R4700 T6910 T6911 amod embryonic,dorsum
R4701 T6911 T6909 pobj dorsum,between
R4702 T6912 T6911 cc and,dorsum
R4703 T6913 T6914 amod embryonic,flank
R4704 T6914 T6911 conj flank,dorsum
R4705 T6915 T6916 det a,feature
R4706 T6916 T6901 attr feature,is
R4707 T6917 T6916 amod characteristic,feature
R4708 T6918 T6901 prep in,is
R4709 T6919 T6920 compound vertebrate,embryos
R4710 T6920 T6918 pobj embryos,in
R4711 T6921 T6901 punct .,is
R4712 T6923 T6924 prep In,serves
R4713 T6925 T6926 compound cell,studies
R4714 T6926 T6923 pobj studies,In
R4715 T6927 T6926 compound lineage,studies
R4716 T6928 T6926 acl carried,studies
R4717 T6929 T6928 prt out,carried
R4718 T6930 T6928 prep in,carried
R4719 T6931 T6932 det the,system
R4720 T6932 T6930 pobj system,in
R4721 T6933 T6932 compound chick,system
R4722 T6934 T6924 punct ", ",serves
R4723 T6935 T6936 det the,notch
R4724 T6936 T6924 nsubj notch,serves
R4725 T6937 T6924 prep as,serves
R4726 T6938 T6939 det a,landmark
R4727 T6939 T6937 pobj landmark,as
R4728 T6940 T6939 prep for,landmark
R4729 T6941 T6942 det the,boundary
R4730 T6942 T6940 pobj boundary,for
R4731 T6943 T6942 prep between,boundary
R4732 T6944 T6943 pobj dermis,between
R4733 T6945 T6944 acl derived,dermis
R4734 T6946 T6945 prep from,derived
R4735 T6947 T6948 amod somitic,mesoderm
R4736 T6948 T6946 pobj mesoderm,from
R4737 T6949 T6944 cc and,dermis
R4738 T6950 T6944 conj dermis,dermis
R4739 T6951 T6950 acl derived,dermis
R4740 T6952 T6951 prep from,derived
R4741 T6953 T6954 amod lateral,plate
R4742 T6954 T6955 compound plate,mesoderm
R4743 T6955 T6952 pobj mesoderm,from
R4744 T6956 T6924 cc and,serves
R4745 T6957 T6958 aux has,termed
R4746 T6958 T6924 conj termed,serves
R4747 T6959 T6958 auxpass been,termed
R4748 T6960 T6961 det the,frontier
R4749 T6961 T6958 oprd frontier,termed
R4750 T6962 T6961 punct “,frontier
R4751 T6963 T6961 amod lateral,frontier
R4752 T6964 T6961 amod somitic,frontier
R4753 T6965 T6958 punct ”,termed
R4754 T6966 T6967 punct (,Olivera
R4755 T6967 T6958 meta Olivera,termed
R4756 T6968 T6967 punct -,Olivera
R4757 T6969 T6967 nmod Martinez,Olivera
R4758 T6970 T6967 nmod et,Olivera
R4759 T6971 T6967 nmod al.,Olivera
R4760 T6972 T6967 nummod 2000,Olivera
R4761 T6973 T6967 punct ;,Olivera
R4762 T6974 T6967 conj Sudo,Olivera
R4763 T6975 T6974 nmod et,Sudo
R4764 T6976 T6974 nmod al.,Sudo
R4765 T6977 T6974 nummod 2001,Sudo
R4766 T6978 T6974 punct ;,Sudo
R4767 T6979 T6974 conj Burke,Sudo
R4768 T6980 T6979 cc and,Burke
R4769 T6981 T6979 conj Nowicki,Burke
R4770 T6982 T6981 nummod 2003,Nowicki
R4771 T6983 T6981 punct ;,Nowicki
R4772 T6984 T6981 conj Nowicki,Nowicki
R4773 T6985 T6984 nmod et,Nowicki
R4774 T6986 T6984 nmod al.,Nowicki
R4775 T6987 T6984 nummod 2003,Nowicki
R4776 T6988 T6984 punct ),Nowicki
R4777 T6989 T6924 punct .,serves
R4778 T6991 T6992 mark Although,carried
R4779 T6992 T7000 advcl carried,give
R4780 T6993 T6994 npadvmod fate,mapping
R4781 T6994 T6996 amod mapping,studies
R4782 T6995 T6994 punct -,mapping
R4783 T6996 T6992 nsubjpass studies,carried
R4784 T6997 T6992 aux have,carried
R4785 T6998 T6992 neg not,carried
R4786 T6999 T6992 auxpass been,carried
R4787 T7001 T6992 prt out,carried
R4788 T7002 T6992 prep in,carried
R4789 T7003 T7004 amod mammalian,embryos
R4790 T7004 T7002 pobj embryos,in
R4791 T7005 T7000 punct ", ",give
R4792 T7006 T7007 npadvmod somite,derived
R4793 T7007 T7013 amod derived,mesoderm
R4794 T7008 T7006 punct -,somite
R4795 T7009 T7006 cc and,somite
R4796 T7010 T7011 amod lateral,plate
R4797 T7011 T7006 conj plate,somite
R4798 T7012 T7007 punct -,derived
R4799 T7013 T7000 nsubj mesoderm,give
R4800 T7014 T7000 aux could,give
R4801 T7015 T7000 dobj rise,give
R4802 T7016 T7000 prep to,give
R4803 T7017 T7016 pobj precursors,to
R4804 T7018 T7000 prep for,give
R4805 T7019 T7018 pobj dermis,for
R4806 T7020 T7019 amod dorsal,dermis
R4807 T7021 T7020 cc and,dorsal
R4808 T7022 T7020 conj ventral,dorsal
R4809 T7023 T7022 prep to,ventral
R4810 T7024 T7025 det the,junction
R4811 T7025 T7023 pobj junction,to
R4812 T7026 T7025 nmod limb,junction
R4813 T7027 T7026 punct –,limb
R4814 T7028 T7029 compound body,wall
R4815 T7029 T7026 appos wall,limb
R4816 T7030 T7000 punct ", ",give
R4817 T7031 T7000 advmod respectively,give
R4818 T7032 T7000 punct .,give
R4819 T7034 T7035 advmod However,conflicts
R4820 T7036 T7035 punct ", ",conflicts
R4821 T7037 T7038 det this,notion
R4822 T7038 T7035 nsubj notion,conflicts
R4823 T7039 T7035 prep with,conflicts
R4824 T7040 T7041 poss our,observation
R4825 T7041 T7039 pobj observation,with
R4826 T7042 T7043 mark that,lies
R4827 T7043 T7041 acl lies,observation
R4828 T7044 T7045 det the,boundary
R4829 T7045 T7043 nsubj boundary,lies
R4830 T7046 T7045 amod future,boundary
R4831 T7047 T7045 compound pigmentation,boundary
R4832 T7048 T7043 advmod ventral,lies
R4833 T7049 T7048 prep to,ventral
R4834 T7050 T7051 det the,notch
R4835 T7051 T7049 pobj notch,to
R4836 T7052 T7051 amod ectodermal,notch
R4837 T7053 T7054 punct (,see
R4838 T7054 T7041 parataxis see,observation
R4839 T7055 T7054 dobj Figure,see
R4840 T7056 T7055 nummod 7,Figure
R4841 T7057 T7054 punct ),see
R4842 T7058 T7035 punct .,conflicts

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T6730 4-14 UBERON:0000924 denotes ectodermal
T6731 63-72 UBERON:0000922 denotes embryonic
T6732 73-79 UBERON:0001137 denotes dorsum
T6733 84-93 UBERON:0000922 denotes embryonic
T6734 94-99 UBERON:0000180 denotes flank
T6735 131-141 NCBITaxon:7742 denotes vertebrate
T6736 142-149 UBERON:0000922 denotes embryos
T6737 264-270 UBERON:0002067 denotes dermis
T6738 284-300 UBERON:0003077 denotes somitic mesoderm
T6739 305-311 UBERON:0002067 denotes dermis
T6740 325-347 UBERON:0003081 denotes lateral plate mesoderm
T6741 381-397 UBERON:0015178 denotes somitic frontier
T6742 553-562 NCBITaxon:40674 denotes mammalian
T6743 563-570 UBERON:0000922 denotes embryos
T6744 572-578 UBERON:0002329 denotes somite
T6745 584-597 UBERON:0003081 denotes lateral plate
T6746 606-614 UBERON:0000926 denotes mesoderm
T6747 649-655 UBERON:0002067 denotes dermis
T6748 682-686 UBERON:0002101 denotes limb
T6749 687-696 UBERON:0000309 denotes body wall
T6750 831-841 UBERON:0000924 denotes ectodermal

2_test

Id Subject Object Predicate Lexical cue
14737183-11023864-84903008 424-428 11023864 denotes 2000
14737183-11401392-84903009 442-446 11401392 denotes 2001
14737183-12586060-84903010 466-470 12586060 denotes 2003
14737183-12559495-84903011 487-491 12559495 denotes 2003
T16217 424-428 11023864 denotes 2000
T27994 442-446 11401392 denotes 2001
T19501 466-470 12586060 denotes 2003
T25180 487-491 12559495 denotes 2003

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T6801 4-14 UBERON:0000924 denotes ectodermal
T6802 63-72 UBERON:0000922 denotes embryonic
T6803 73-79 UBERON:0001137 denotes dorsum
T6804 84-93 UBERON:0000922 denotes embryonic
T6805 94-99 UBERON:0000180 denotes flank
T6806 131-141 NCBITaxon:7742 denotes vertebrate
T6807 142-149 UBERON:0000922 denotes embryos
T6808 154-158 CL_GO_EXT:cell denotes cell
T6809 194-199 NCBITaxon_UBERON_EXT:chick denotes chick
T6810 264-270 UBERON:0002067 denotes dermis
T6811 284-300 UBERON:0003077 denotes somitic mesoderm
T6812 305-311 UBERON:0002067 denotes dermis
T6813 325-347 UBERON:0003081 denotes lateral plate mesoderm
T6814 381-397 UBERON:0015178 denotes somitic frontier
T6815 553-562 NCBITaxon:40674 denotes mammalian
T6816 563-570 UBERON:0000922 denotes embryos
T6817 572-578 UBERON:0002329 denotes somite
T6818 584-597 UBERON:0003081 denotes lateral plate
T6819 606-614 UBERON:0000926 denotes mesoderm
T6820 649-655 UBERON:0002067 denotes dermis
T6821 682-686 UBERON:0002101 denotes limb
T6822 687-696 UBERON:0000309 denotes body wall
T6823 789-801 GO_PATO_EXT:biological_pigmentation_process_or_quality denotes pigmentation
T6824 831-841 UBERON:0000924 denotes ectodermal