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PMC:3062687 / 48-296 JSONTXT

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bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T241 160-164 P23396 denotes RPS3

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T106 10-13 CC denotes and
T107 14-19 NN denotes NF-κB
T108 20-28 NN denotes function
T109 29-47 NN denotes during Escherichia
T110 48-57 NN denotes coli O157
T111 57-58 -COLON- denotes :
T112 58-60 NN denotes H7
T113 61-70 NN denotes infection
T114 82-87 NN denotes NF-κB
T115 88-90 VB denotes is
T116 91-92 DT denotes a
T117 93-98 JJ denotes major
T118 99-103 NN denotes gene
T119 104-113 NN denotes regulator
T120 114-116 IN denotes in
T121 117-123 JJ denotes immune
T122 124-133 NN denotes responses
T123 134-137 CC denotes and
T124 138-147 JJ denotes ribosomal
T125 148-155 NN denotes protein
T126 156-158 NN denotes S3
T127 159-160 -LRB- denotes (
T128 160-164 NN denotes RPS3
T129 164-165 -RRB- denotes )
T130 166-168 VB denotes is
T131 169-171 DT denotes an
T132 172-177 NN denotes NF-κB
T133 178-185 NN denotes subunit
T134 186-190 WDT denotes that
T135 191-198 VB denotes directs
T136 199-207 JJ denotes specific
T137 208-212 NN denotes gene
T138 213-226 NN denotes transcription
T139 228-235 RB denotes However
T140 235-236 -COMMA- denotes ,
T141 237-239 PRP denotes it
T142 240-242 VB denotes is
R85 T110 T106 arg2Of coli O157,and
R86 T110 T107 arg1Of coli O157,NF-κB
R87 T110 T108 arg1Of coli O157,function
R88 T110 T109 arg1Of coli O157,during Escherichia
R90 T113 T112 arg1Of infection,H7
R91 T114 T115 arg1Of NF-κB,is
R92 T115 T123 arg1Of is,and
R93 T119 T115 arg2Of regulator,is
R94 T119 T116 arg1Of regulator,a
R95 T119 T117 arg1Of regulator,major
R96 T119 T118 arg1Of regulator,gene
R97 T119 T120 arg1Of regulator,in
R98 T122 T120 arg2Of responses,in
R99 T122 T121 arg1Of responses,immune
R100 T126 T124 arg1Of S3,ribosomal
R101 T126 T125 arg1Of S3,protein
R102 T126 T127 arg1Of S3,(
R103 T126 T130 arg1Of S3,is
R104 T128 T127 arg2Of RPS3,(
R105 T129 T127 arg3Of ),(
R106 T130 T123 arg2Of is,and
R107 T133 T130 arg2Of subunit,is
R108 T133 T131 arg1Of subunit,an
R109 T133 T132 arg1Of subunit,NF-κB
R110 T133 T134 arg1Of subunit,that
R111 T133 T135 arg1Of subunit,directs
R112 T138 T135 arg2Of transcription,directs
R113 T138 T136 arg1Of transcription,specific
R114 T138 T137 arg1Of transcription,gene
R115 T142 T139 arg1Of is,However
R116 T142 T140 arg1Of is,","

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T284 186-190 WDT denotes that
T285 191-198 VBZ denotes directs
T286 199-207 JJ denotes specific
T287 208-212 NN denotes gene
T288 213-226 NN denotes transcription
T289 226-227 . denotes .
T290 228-235 RB denotes However
T291 235-236 , denotes ,
T292 237-239 PRP denotes it
T293 240-242 VBZ denotes is
T256 10-13 CC denotes and
T257 14-19 JJ denotes NF-κB
T258 20-28 NN denotes function
T259 29-47 NNP denotes during Escherichia
T260 48-57 NNP denotes coli O157
T261 57-58 : denotes :
T262 58-60 NNP denotes H7
T263 61-70 NN denotes infection
T264 82-87 NN denotes NF-κB
T265 88-90 VBZ denotes is
T266 91-92 DT denotes a
T267 93-98 JJ denotes major
T268 99-103 NN denotes gene
T269 104-113 NN denotes regulator
T270 114-116 IN denotes in
T271 117-123 JJ denotes immune
T272 124-133 NNS denotes responses
T273 134-137 CC denotes and
T274 138-147 JJ denotes ribosomal
T275 148-155 NN denotes protein
T276 156-158 NNP denotes S3
T277 159-160 -LRB- denotes (
T278 160-164 NNP denotes RPS3
T279 164-165 -RRB- denotes )
T280 166-168 VBZ denotes is
T281 169-171 DT denotes an
T282 172-177 JJ denotes NF-κB
T283 178-185 NN denotes subunit
R506 T263 T264 compound infection,NF-κB
R507 T264 T265 nsubj NF-κB,is
R508 T265 T265 ROOT is,is
R509 T266 T269 det a,regulator
R510 T267 T269 amod major,regulator
R511 T268 T269 compound gene,regulator
R512 T269 T265 attr regulator,is
R513 T270 T269 prep in,regulator
R514 T271 T272 amod immune,responses
R515 T272 T270 pobj responses,in
R516 T273 T272 cc and,responses
R517 T274 T276 amod ribosomal,S3
R518 T275 T276 compound protein,S3
R519 T276 T269 appos S3,regulator
R520 T277 T278 punct (,RPS3
R521 T278 T276 appos RPS3,S3
R522 T279 T276 punct ),S3
R523 T280 T265 conj is,is
R524 T281 T283 det an,subunit
R525 T282 T283 amod NF-κB,subunit
R526 T283 T280 attr subunit,is
R223 T289 T265 punct .,is
R224 T290 T293 advmod However,is
R225 T291 T293 punct ",",is
R226 T292 T293 nsubj it,is
R227 T293 T293 ROOT is,is
R500 T257 T258 compound NF-κB,function
R502 T259 T260 compound during Escherichia,coli O157
R504 T261 T260 punct :,coli O157
R505 T262 T264 compound H7,NF-κB
R218 T284 T285 nsubj that,directs
R219 T285 T283 relcl directs,subunit
R220 T286 T288 amod specific,transcription
R221 T287 T288 compound gene,transcription
R222 T288 T285 dobj transcription,directs

GO-BP

Id Subject Object Predicate Lexical cue
T435 117-133 http://purl.obolibrary.org/obo/GO_0006955 denotes immune responses
T436 213-226 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription

GO-MF

Id Subject Object Predicate Lexical cue
T440 138-155 http://purl.obolibrary.org/obo/GO_0003735 denotes ribosomal protein

sentences

Id Subject Object Predicate Lexical cue
T95 82-227 Sentence denotes NF-κB is a major gene regulator in immune responses and ribosomal protein S3 (RPS3) is an NF-κB subunit that directs specific gene transcription.
T2 73-81 Sentence denotes Abstract
T3 82-227 Sentence denotes NF-κB is a major gene regulator in immune responses and ribosomal protein S3 (RPS3) is an NF-κB subunit that directs specific gene transcription.

events-check-again

Id Subject Object Predicate Lexical cue
T568 138-158 Protein denotes ribosomal protein S3
T569 160-164 Protein denotes RPS3
R444 T569 T568 equivalentTo RPS3,ribosomal protein S3

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T501 14-19 Protein denotes NF-κB
T506 82-87 Protein denotes NF-κB
T507 138-158 Protein denotes ribosomal protein S3
T508 160-164 Protein denotes RPS3
T509 172-177 Protein denotes NF-κB

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T68 138-158 Protein denotes ribosomal protein S3
T69 160-164 Protein denotes RPS3
R56 T69 T68 equivalentTo RPS3,ribosomal protein S3

test2

Id Subject Object Predicate Lexical cue
T39 138-158 Protein denotes ribosomal protein S3
T40 160-164 Protein denotes RPS3
R33 T40 T39 equivalentTo RPS3,ribosomal protein S3