
PMC:3062687 / 4044-5021
Annnotations
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2807 | 0-4 | P23396 | denotes | RPS3 |
T2808 | 9-13 | O14920 | denotes | IKKβ |
T2809 | 155-159 | O14920 | denotes | IKKβ |
T2810 | 278-282 | P23396 | denotes | RPS3 |
T2811 | 315-318 | P21579 | denotes | p65 |
T2812 | 315-318 | Q04206 | denotes | p65 |
T2813 | 319-322 | P19838 | denotes | p50 |
T2814 | 323-327 | P25963 | denotes | IκBα |
T2815 | 397-401 | O14920 | denotes | IKKβ |
T2816 | 439-443 | P23396 | denotes | RPS3 |
T2817 | 488-492 | O14920 | denotes | IKKβ |
T2818 | 497-501 | P23396 | denotes | RPS3 |
T2819 | 595-599 | O14920 | denotes | IKKβ |
T2820 | 600-604 | P23396 | denotes | RPS3 |
T2821 | 731-735 | P23396 | denotes | RPS3 |
T2822 | 736-740 | O14920 | denotes | IKKβ |
T2823 | 780-783 | P01375 | denotes | TNF |
T2824 | 857-861 | P23396 | denotes | RPS3 |
T2825 | 953-957 | P23396 | denotes | RPS3 |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
21399639-17072322-74765153 | 260-262 | 17072322 | denotes | 20 |
21399639-17072322-74765153 | 260-262 | 17072322 | denotes | 20 |
21399639-10602462-74765153 | 260-262 | 10602462 | denotes | 20 |
21399639-10602462-74765153 | 260-262 | 10602462 | denotes | 20 |
21399639-10740266-74765153 | 260-262 | 10740266 | denotes | 20 |
21399639-10740266-74765153 | 260-262 | 10740266 | denotes | 20 |
21399639-18045535-74765154 | 363-364 | 18045535 | denotes | 6 |
21399639-18045535-74765154 | 363-364 | 18045535 | denotes | 6 |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2641 | 0-4 | NN | denotes | RPS3 |
T2642 | 5-8 | CC | denotes | and |
T2643 | 9-13 | NN | denotes | IKKβ |
T2644 | 14-25 | NN | denotes | interaction |
T2645 | 26-29 | DT | denotes | The |
T2646 | 30-40 | NN | denotes | activation |
T2647 | 41-43 | IN | denotes | of |
T2648 | 44-47 | DT | denotes | the |
T2649 | 48-57 | NN | denotes | inhibitor |
T2650 | 58-60 | IN | denotes | of |
T2651 | 61-63 | NN | denotes | κB |
T2652 | 64-70 | NN | denotes | kinase |
T2653 | 71-72 | -LRB- | denotes | ( |
T2654 | 72-75 | NN | denotes | IKK |
T2655 | 75-76 | -RRB- | denotes | ) |
T2656 | 76-77 | -COMMA- | denotes | , |
T2657 | 78-88 | VB | denotes | consisting |
T2658 | 89-91 | IN | denotes | of |
T2659 | 92-93 | DT | denotes | a |
T2660 | 94-104 | JJ | denotes | regulatory |
T2661 | 105-112 | NN | denotes | subunit |
T2662 | 113-117 | NN | denotes | IKKγ |
T2663 | 118-121 | CC | denotes | and |
T2664 | 122-125 | CD | denotes | two |
T2665 | 126-135 | JJ | denotes | catalytic |
T2666 | 136-144 | NN | denotes | subunits |
T2667 | 144-145 | -COMMA- | denotes | , |
T2668 | 146-150 | NN | denotes | IKKα |
T2669 | 151-154 | CC | denotes | and |
T2670 | 155-159 | NN | denotes | IKKβ |
T2671 | 159-160 | -COMMA- | denotes | , |
T2672 | 161-163 | VB | denotes | is |
T2673 | 164-172 | JJ | denotes | critical |
T2674 | 173-176 | IN | denotes | for |
T2675 | 177-180 | DT | denotes | the |
T2676 | 181-196 | NN | denotes | phosphorylation |
T2677 | 197-200 | CC | denotes | and |
T2678 | 201-209 | NN | denotes | dispatch |
T2679 | 210-212 | IN | denotes | of |
T2680 | 213-216 | DT | denotes | the |
T2681 | 217-227 | JJ | denotes | inhibitory |
T2682 | 228-232 | NN | denotes | IκBs |
T2683 | 233-236 | CC | denotes | and |
T2684 | 237-240 | DT | denotes | the |
T2685 | 241-251 | NN | denotes | liberation |
T2686 | 252-254 | IN | denotes | of |
T2687 | 255-265 | NN | denotes | NF-κB20-22 |
T2688 | 267-272 | VB | denotes | Given |
T2689 | 273-277 | IN | denotes | that |
T2690 | 278-282 | NN | denotes | RPS3 |
T2691 | 283-286 | MD | denotes | can |
T2692 | 287-289 | VB | denotes | be |
T2693 | 290-295 | VB | denotes | found |
T2694 | 296-298 | IN | denotes | in |
T2695 | 299-302 | DT | denotes | the |
T2696 | 303-314 | JJ | denotes | cytoplasmic |
T2697 | 315-327 | NN | denotes | p65-p50-IκBα |
T2698 | 328-338 | JJ | denotes | inhibitory |
T2699 | 339-346 | NN | denotes | complex |
T2700 | 347-349 | IN | denotes | in |
T2701 | 350-357 | VB | denotes | resting |
T2702 | 358-364 | NN | denotes | cells6 |
T2703 | 364-365 | -COMMA- | denotes | , |
T2704 | 366-368 | PRP | denotes | we |
T2705 | 369-381 | VB | denotes | hypothesized |
T2706 | 382-386 | IN | denotes | that |
T2707 | 387-396 | VB | denotes | activated |
T2708 | 397-401 | NN | denotes | IKKβ |
T2709 | 402-407 | MD | denotes | might |
T2710 | 408-412 | RB | denotes | also |
T2711 | 413-417 | VB | denotes | bind |
T2712 | 418-420 | TO | denotes | to |
T2713 | 421-424 | CC | denotes | and |
T2714 | 425-438 | VB | denotes | phosphorylate |
T2715 | 439-443 | NN | denotes | RPS3 |
T2716 | 445-450 | RB | denotes | First |
T2717 | 450-451 | -COMMA- | denotes | , |
T2718 | 452-454 | PRP | denotes | we |
T2719 | 455-460 | VB | denotes | found |
T2720 | 461-465 | IN | denotes | that |
T2721 | 466-477 | RB | denotes | ectopically |
T2722 | 478-487 | VB | denotes | expressed |
T2723 | 488-492 | NN | denotes | IKKβ |
T2724 | 493-496 | CC | denotes | and |
T2725 | 497-501 | NN | denotes | RPS3 |
T2726 | 502-512 | VB | denotes | interacted |
T2727 | 513-514 | -LRB- | denotes | ( |
T2728 | 514-518 | NNP | denotes | Fig. |
T2729 | 519-521 | NN | denotes | 1c |
T2730 | 521-522 | -RRB- | denotes | ) |
T2731 | 524-526 | PRP | denotes | We |
T2732 | 527-531 | RB | denotes | next |
T2733 | 532-540 | VB | denotes | examined |
T2734 | 541-548 | VB | denotes | resting |
T2735 | 549-555 | NN | denotes | Jurkat |
T2736 | 556-561 | NN | denotes | cells |
T2737 | 562-565 | CC | denotes | and |
T2738 | 566-574 | VB | denotes | detected |
T2739 | 575-576 | DT | denotes | a |
T2740 | 577-583 | JJ | denotes | modest |
T2741 | 584-594 | JJ | denotes | endogenous |
T2742 | 595-604 | NN | denotes | IKKβ-RPS3 |
T2743 | 605-616 | NN | denotes | interaction |
T2744 | 617-618 | -LRB- | denotes | ( |
T2745 | 618-622 | NNP | denotes | Fig. |
T2746 | 623-625 | NN | denotes | 1d |
T2747 | 625-626 | -RRB- | denotes | ) |
T2748 | 626-627 | -COMMA- | denotes | , |
T2749 | 628-639 | RB | denotes | potentially |
T2750 | 640-650 | VB | denotes | accounting |
T2751 | 651-654 | IN | denotes | for |
T2752 | 655-658 | DT | denotes | the |
T2753 | 659-664 | JJ | denotes | basal |
T2754 | 665-670 | NN | denotes | NF-κB |
T2755 | 671-684 | NN | denotes | transcription |
T2756 | 685-693 | VB | denotes | required |
T2757 | 694-697 | IN | denotes | for |
T2758 | 698-702 | NN | denotes | cell |
T2759 | 703-716 | NN | denotes | proliferation |
T2760 | 717-720 | CC | denotes | and |
T2761 | 721-729 | NN | denotes | survival |
T2762 | 731-740 | NN | denotes | RPS3-IKKβ |
T2763 | 741-752 | NN | denotes | association |
T2764 | 753-756 | VB | denotes | was |
T2765 | 757-764 | RB | denotes | clearly |
T2766 | 765-774 | VB | denotes | augmented |
T2767 | 775-779 | IN | denotes | upon |
T2768 | 780-783 | NN | denotes | TNF |
T2769 | 784-795 | NN | denotes | stimulation |
T2770 | 795-796 | -COMMA- | denotes | , |
T2771 | 797-804 | VB | denotes | peaking |
T2772 | 805-807 | IN | denotes | at |
T2773 | 808-810 | CD | denotes | 10 |
T2774 | 811-815 | NN | denotes | min. |
T2775 | 816-817 | -LRB- | denotes | ( |
T2776 | 817-821 | NNP | denotes | Fig. |
T2777 | 822-824 | NN | denotes | 1d |
T2778 | 824-825 | -RRB- | denotes | ) |
T2779 | 825-826 | -COMMA- | denotes | , |
T2780 | 827-836 | VB | denotes | following |
T2781 | 837-844 | JJ | denotes | similar |
T2782 | 845-853 | NN | denotes | kinetics |
T2783 | 854-856 | TO | denotes | to |
T2784 | 857-861 | NN | denotes | RPS3 |
T2785 | 862-868 | NN | denotes | serine |
T2786 | 869-884 | NN | denotes | phosphorylation |
T2787 | 885-886 | -LRB- | denotes | ( |
T2788 | 886-890 | NN | denotes | Fig. |
T2789 | 891-893 | NN | denotes | 1b |
T2790 | 893-894 | -RRB- | denotes | ) |
T2791 | 896-898 | IN | denotes | By |
T2792 | 899-907 | NN | denotes | contrast |
T2793 | 907-908 | -COMMA- | denotes | , |
T2794 | 909-914 | EX | denotes | there |
T2795 | 915-918 | VB | denotes | was |
T2796 | 919-921 | DT | denotes | no |
T2797 | 922-932 | JJ | denotes | detectable |
T2798 | 933-944 | NN | denotes | interaction |
T2799 | 945-952 | IN | denotes | between |
T2800 | 953-957 | NN | denotes | RPS3 |
T2801 | 958-961 | CC | denotes | and |
T2802 | 962-966 | NN | denotes | IKKα |
T2803 | 967-968 | -LRB- | denotes | ( |
T2804 | 968-972 | NNP | denotes | Fig. |
T2805 | 973-975 | NN | denotes | 1d |
T2806 | 975-976 | -RRB- | denotes | ) |
R2062 | T2641 | T2642 | arg1Of | RPS3,and |
R2063 | T2643 | T2642 | arg2Of | IKKβ,and |
R2064 | T2644 | T2641 | arg1Of | interaction,RPS3 |
R2065 | T2644 | T2643 | arg1Of | interaction,IKKβ |
R2066 | T2646 | T2645 | arg1Of | activation,The |
R2067 | T2646 | T2647 | arg1Of | activation,of |
R2068 | T2646 | T2656 | arg1Of | activation,"," |
R2069 | T2646 | T2657 | arg1Of | activation,consisting |
R2070 | T2646 | T2672 | arg1Of | activation,is |
R2071 | T2646 | T2673 | arg1Of | activation,critical |
R2072 | T2649 | T2647 | arg2Of | inhibitor,of |
R2073 | T2649 | T2648 | arg1Of | inhibitor,the |
R2074 | T2649 | T2650 | arg1Of | inhibitor,of |
R2075 | T2652 | T2650 | arg2Of | kinase,of |
R2076 | T2652 | T2651 | arg1Of | kinase,κB |
R2077 | T2652 | T2653 | arg1Of | kinase,( |
R2078 | T2654 | T2653 | arg2Of | IKK,( |
R2079 | T2655 | T2653 | arg3Of | ),( |
R2080 | T2657 | T2658 | arg1Of | consisting,of |
R2081 | T2662 | T2659 | arg1Of | IKKγ,a |
R2082 | T2662 | T2660 | arg1Of | IKKγ,regulatory |
R2083 | T2662 | T2661 | arg1Of | IKKγ,subunit |
R2084 | T2662 | T2663 | arg1Of | IKKγ,and |
R2085 | T2663 | T2658 | arg2Of | and,of |
R2086 | T2663 | T2667 | arg1Of | and,"," |
R2087 | T2666 | T2663 | arg2Of | subunits,and |
R2088 | T2666 | T2664 | arg1Of | subunits,two |
R2089 | T2666 | T2665 | arg1Of | subunits,catalytic |
R2090 | T2668 | T2669 | arg1Of | IKKα,and |
R2091 | T2669 | T2667 | arg2Of | and,"," |
R2092 | T2670 | T2669 | arg2Of | IKKβ,and |
R2093 | T2672 | T2671 | arg1Of | is,"," |
R2094 | T2673 | T2672 | arg2Of | critical,is |
R2095 | T2673 | T2674 | arg1Of | critical,for |
R2096 | T2676 | T2677 | arg1Of | phosphorylation,and |
R2097 | T2677 | T2675 | arg1Of | and,the |
R2098 | T2677 | T2679 | arg1Of | and,of |
R2099 | T2677 | T2683 | arg1Of | and,and |
R2100 | T2678 | T2677 | arg2Of | dispatch,and |
R2101 | T2682 | T2679 | arg2Of | IκBs,of |
R2102 | T2682 | T2680 | arg1Of | IκBs,the |
R2103 | T2682 | T2681 | arg1Of | IκBs,inhibitory |
R2104 | T2683 | T2674 | arg2Of | and,for |
R2105 | T2685 | T2683 | arg2Of | liberation,and |
R2106 | T2685 | T2684 | arg1Of | liberation,the |
R2107 | T2685 | T2686 | arg1Of | liberation,of |
R2108 | T2687 | T2686 | arg2Of | NF-κB20-22,of |
R2109 | T2690 | T2688 | arg2Of | RPS3,Given |
R2110 | T2690 | T2689 | arg1Of | RPS3,that |
R2111 | T2690 | T2691 | arg1Of | RPS3,can |
R2112 | T2690 | T2692 | arg1Of | RPS3,be |
R2113 | T2690 | T2693 | arg2Of | RPS3,found |
R2114 | T2693 | T2691 | arg2Of | found,can |
R2115 | T2693 | T2692 | arg2Of | found,be |
R2116 | T2693 | T2694 | arg1Of | found,in |
R2117 | T2693 | T2703 | arg1Of | found,"," |
R2118 | T2699 | T2694 | arg2Of | complex,in |
R2119 | T2699 | T2695 | arg1Of | complex,the |
R2120 | T2699 | T2696 | arg1Of | complex,cytoplasmic |
R2121 | T2699 | T2697 | arg1Of | complex,p65-p50-IκBα |
R2122 | T2699 | T2698 | arg1Of | complex,inhibitory |
R2123 | T2699 | T2700 | arg1Of | complex,in |
R2124 | T2702 | T2700 | arg2Of | cells6,in |
R2125 | T2702 | T2701 | arg1Of | cells6,resting |
R2126 | T2704 | T2705 | arg1Of | we,hypothesized |
R2127 | T2705 | T2703 | arg2Of | hypothesized,"," |
R2128 | T2708 | T2707 | arg2Of | IKKβ,activated |
R2129 | T2708 | T2709 | arg1Of | IKKβ,might |
R2130 | T2708 | T2711 | arg1Of | IKKβ,bind |
R2131 | T2708 | T2714 | arg1Of | IKKβ,phosphorylate |
R2132 | T2711 | T2712 | arg1Of | bind,to |
R2133 | T2711 | T2713 | arg1Of | bind,and |
R2134 | T2713 | T2705 | arg2Of | and,hypothesized |
R2135 | T2713 | T2706 | arg1Of | and,that |
R2136 | T2713 | T2709 | arg2Of | and,might |
R2137 | T2713 | T2710 | arg1Of | and,also |
R2138 | T2714 | T2713 | arg2Of | phosphorylate,and |
R2139 | T2715 | T2714 | arg2Of | RPS3,phosphorylate |
R2140 | T2718 | T2719 | arg1Of | we,found |
R2141 | T2719 | T2716 | arg1Of | found,First |
R2142 | T2719 | T2717 | arg1Of | found,"," |
R2143 | T2722 | T2721 | arg1Of | expressed,ectopically |
R2144 | T2723 | T2724 | arg1Of | IKKβ,and |
R2145 | T2724 | T2722 | arg1Of | and,expressed |
R2146 | T2724 | T2726 | arg1Of | and,interacted |
R2147 | T2725 | T2724 | arg2Of | RPS3,and |
R2148 | T2726 | T2719 | arg2Of | interacted,found |
R2149 | T2726 | T2720 | arg1Of | interacted,that |
R2150 | T2726 | T2727 | arg1Of | interacted,( |
R2151 | T2729 | T2727 | arg2Of | 1c,( |
R2152 | T2729 | T2728 | arg1Of | 1c,Fig. |
R2153 | T2730 | T2727 | arg3Of | ),( |
R2154 | T2731 | T2733 | arg1Of | We,examined |
R2155 | T2731 | T2738 | arg1Of | We,detected |
R2156 | T2731 | T2750 | arg1Of | We,accounting |
R2157 | T2733 | T2737 | arg1Of | examined,and |
R2158 | T2736 | T2733 | arg2Of | cells,examined |
R2159 | T2736 | T2734 | arg1Of | cells,resting |
R2160 | T2736 | T2735 | arg1Of | cells,Jurkat |
R2161 | T2737 | T2732 | arg1Of | and,next |
R2162 | T2737 | T2748 | arg1Of | and,"," |
R2163 | T2737 | T2750 | modOf | and,accounting |
R2164 | T2738 | T2737 | arg2Of | detected,and |
R2165 | T2743 | T2738 | arg2Of | interaction,detected |
R2166 | T2743 | T2739 | arg1Of | interaction,a |
R2167 | T2743 | T2740 | arg1Of | interaction,modest |
R2168 | T2743 | T2741 | arg1Of | interaction,endogenous |
R2169 | T2743 | T2742 | arg1Of | interaction,IKKβ-RPS3 |
R2170 | T2743 | T2744 | arg1Of | interaction,( |
R2171 | T2746 | T2744 | arg2Of | 1d,( |
R2172 | T2746 | T2745 | arg1Of | 1d,Fig. |
R2173 | T2747 | T2744 | arg3Of | ),( |
R2174 | T2750 | T2749 | arg1Of | accounting,potentially |
R2175 | T2750 | T2751 | arg1Of | accounting,for |
R2176 | T2755 | T2751 | arg2Of | transcription,for |
R2177 | T2755 | T2752 | arg1Of | transcription,the |
R2178 | T2755 | T2753 | arg1Of | transcription,basal |
R2179 | T2755 | T2754 | arg1Of | transcription,NF-κB |
R2180 | T2755 | T2756 | arg2Of | transcription,required |
R2181 | T2756 | T2757 | arg1Of | required,for |
R2182 | T2759 | T2760 | arg1Of | proliferation,and |
R2183 | T2760 | T2757 | arg2Of | and,for |
R2184 | T2760 | T2758 | arg1Of | and,cell |
R2185 | T2761 | T2760 | arg2Of | survival,and |
R2186 | T2763 | T2762 | arg1Of | association,RPS3-IKKβ |
R2187 | T2763 | T2764 | arg1Of | association,was |
R2188 | T2763 | T2766 | arg2Of | association,augmented |
R2189 | T2763 | T2771 | arg1Of | association,peaking |
R2190 | T2766 | T2764 | arg2Of | augmented,was |
R2191 | T2766 | T2765 | arg1Of | augmented,clearly |
R2192 | T2766 | T2767 | arg1Of | augmented,upon |
R2193 | T2766 | T2770 | arg1Of | augmented,"," |
R2194 | T2766 | T2771 | modOf | augmented,peaking |
R2195 | T2766 | T2779 | arg1Of | augmented,"," |
R2196 | T2766 | T2780 | arg1Of | augmented,following |
R2197 | T2769 | T2767 | arg2Of | stimulation,upon |
R2198 | T2769 | T2768 | arg1Of | stimulation,TNF |
R2199 | T2771 | T2772 | arg1Of | peaking,at |
R2200 | T2774 | T2772 | arg2Of | min.,at |
R2201 | T2774 | T2773 | arg1Of | min.,10 |
R2202 | T2774 | T2775 | arg1Of | min.,( |
R2203 | T2777 | T2775 | arg2Of | 1d,( |
R2204 | T2777 | T2776 | arg1Of | 1d,Fig. |
R2205 | T2778 | T2775 | arg3Of | ),( |
R2206 | T2782 | T2780 | arg2Of | kinetics,following |
R2207 | T2782 | T2781 | arg1Of | kinetics,similar |
R2208 | T2782 | T2783 | arg1Of | kinetics,to |
R2209 | T2786 | T2783 | arg2Of | phosphorylation,to |
R2210 | T2786 | T2784 | arg1Of | phosphorylation,RPS3 |
R2211 | T2786 | T2785 | arg1Of | phosphorylation,serine |
R2212 | T2786 | T2787 | arg1Of | phosphorylation,( |
R2213 | T2789 | T2787 | arg2Of | 1b,( |
R2214 | T2789 | T2788 | arg1Of | 1b,Fig. |
R2215 | T2790 | T2787 | arg3Of | ),( |
R2216 | T2792 | T2791 | arg2Of | contrast,By |
R2217 | T2794 | T2795 | arg1Of | there,was |
R2218 | T2795 | T2791 | arg1Of | was,By |
R2219 | T2795 | T2793 | arg1Of | was,"," |
R2220 | T2798 | T2795 | arg2Of | interaction,was |
R2221 | T2798 | T2796 | arg1Of | interaction,no |
R2222 | T2798 | T2797 | arg1Of | interaction,detectable |
R2223 | T2798 | T2799 | arg1Of | interaction,between |
R2224 | T2800 | T2801 | arg1Of | RPS3,and |
R2225 | T2801 | T2799 | arg2Of | and,between |
R2226 | T2801 | T2803 | arg1Of | and,( |
R2227 | T2802 | T2801 | arg2Of | IKKα,and |
R2228 | T2805 | T2803 | arg2Of | 1d,( |
R2229 | T2805 | T2804 | arg1Of | 1d,Fig. |
R2230 | T2806 | T2803 | arg3Of | ),( |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2826 | 0-4 | CD | denotes | RPS3 |
T2827 | 5-8 | CC | denotes | and |
T2828 | 9-13 | NNP | denotes | IKKβ |
T2829 | 14-25 | NN | denotes | interaction |
T2830 | 26-29 | DT | denotes | The |
T2831 | 30-40 | NN | denotes | activation |
T2832 | 41-43 | IN | denotes | of |
T2833 | 44-47 | DT | denotes | the |
T2834 | 48-57 | NN | denotes | inhibitor |
T2835 | 58-60 | IN | denotes | of |
T2836 | 61-63 | NN | denotes | κB |
T2837 | 64-70 | NN | denotes | kinase |
T2838 | 71-72 | -LRB- | denotes | ( |
T2839 | 72-75 | NNP | denotes | IKK |
T2840 | 75-76 | -RRB- | denotes | ) |
T2841 | 76-77 | , | denotes | , |
T2842 | 78-88 | VBG | denotes | consisting |
T2843 | 89-91 | IN | denotes | of |
T2844 | 92-93 | DT | denotes | a |
T2845 | 94-104 | JJ | denotes | regulatory |
T2846 | 105-112 | NN | denotes | subunit |
T2847 | 113-117 | NNP | denotes | IKKγ |
T2848 | 118-121 | CC | denotes | and |
T2849 | 122-125 | CD | denotes | two |
T2850 | 126-135 | JJ | denotes | catalytic |
T2851 | 136-144 | NNS | denotes | subunits |
T2852 | 144-145 | , | denotes | , |
T2853 | 146-150 | NNP | denotes | IKKα |
T2854 | 151-154 | CC | denotes | and |
T2855 | 155-159 | NNP | denotes | IKKβ |
T2856 | 159-160 | , | denotes | , |
T2857 | 161-163 | VBZ | denotes | is |
T2858 | 164-172 | JJ | denotes | critical |
T2859 | 173-176 | IN | denotes | for |
T2860 | 177-180 | DT | denotes | the |
T2861 | 181-196 | NN | denotes | phosphorylation |
T2862 | 197-200 | CC | denotes | and |
T2863 | 201-209 | VB | denotes | dispatch |
T2864 | 210-212 | IN | denotes | of |
T2865 | 213-216 | DT | denotes | the |
T2866 | 217-227 | JJ | denotes | inhibitory |
T2867 | 228-232 | NNS | denotes | IκBs |
T2868 | 233-236 | CC | denotes | and |
T2869 | 237-240 | DT | denotes | the |
T2870 | 241-251 | NN | denotes | liberation |
T2871 | 252-254 | IN | denotes | of |
T2872 | 255-265 | NN | denotes | NF-κB20-22 |
T2873 | 265-266 | . | denotes | . |
T2874 | 267-272 | VBN | denotes | Given |
T2875 | 273-277 | IN | denotes | that |
T2876 | 278-282 | NNP | denotes | RPS3 |
T2877 | 283-286 | MD | denotes | can |
T2878 | 287-289 | VB | denotes | be |
T2879 | 290-295 | VBN | denotes | found |
T2880 | 296-298 | IN | denotes | in |
T2881 | 299-302 | DT | denotes | the |
T2882 | 303-314 | JJ | denotes | cytoplasmic |
T2883 | 315-327 | NN | denotes | p65-p50-IκBα |
T2884 | 328-338 | NN | denotes | inhibitory |
T2885 | 339-346 | NN | denotes | complex |
T2886 | 347-349 | IN | denotes | in |
T2887 | 350-357 | VBG | denotes | resting |
T2888 | 358-364 | CD | denotes | cells6 |
T2889 | 364-365 | , | denotes | , |
T2890 | 366-368 | PRP | denotes | we |
T2891 | 369-381 | VBD | denotes | hypothesized |
T2892 | 382-386 | IN | denotes | that |
T2893 | 387-396 | VBN | denotes | activated |
T2894 | 397-401 | NNP | denotes | IKKβ |
T2895 | 402-407 | MD | denotes | might |
T2896 | 408-412 | RB | denotes | also |
T2897 | 413-417 | NN | denotes | bind |
T2898 | 418-420 | TO | denotes | to |
T2899 | 421-424 | CC | denotes | and |
T2900 | 425-438 | VB | denotes | phosphorylate |
T2901 | 439-443 | NNP | denotes | RPS3 |
T2902 | 443-444 | . | denotes | . |
T2903 | 445-450 | RB | denotes | First |
T2904 | 450-451 | , | denotes | , |
T2905 | 452-454 | PRP | denotes | we |
T2906 | 455-460 | VBD | denotes | found |
T2907 | 461-465 | IN | denotes | that |
T2908 | 466-477 | RB | denotes | ectopically |
T2909 | 478-487 | VBN | denotes | expressed |
T2910 | 488-492 | NNP | denotes | IKKβ |
T2911 | 493-496 | CC | denotes | and |
T2912 | 497-501 | NNP | denotes | RPS3 |
T2913 | 502-512 | VBD | denotes | interacted |
T2914 | 513-514 | -LRB- | denotes | ( |
T2915 | 514-518 | NNP | denotes | Fig. |
T2916 | 519-521 | CD | denotes | 1c |
T2917 | 521-522 | -RRB- | denotes | ) |
T2918 | 522-523 | . | denotes | . |
T2919 | 524-526 | PRP | denotes | We |
T2920 | 527-531 | JJ | denotes | next |
T2921 | 532-540 | VBD | denotes | examined |
T2922 | 541-548 | VBG | denotes | resting |
T2923 | 549-555 | NNP | denotes | Jurkat |
T2924 | 556-561 | NNS | denotes | cells |
T2925 | 562-565 | CC | denotes | and |
T2926 | 566-574 | VBD | denotes | detected |
T2927 | 575-576 | DT | denotes | a |
T2928 | 577-583 | JJ | denotes | modest |
T2929 | 584-594 | JJ | denotes | endogenous |
T2930 | 595-604 | JJ | denotes | IKKβ-RPS3 |
T2931 | 605-616 | NN | denotes | interaction |
T2932 | 617-618 | -LRB- | denotes | ( |
T2933 | 618-622 | NNP | denotes | Fig. |
T2934 | 623-625 | CD | denotes | 1d |
T2935 | 625-626 | -RRB- | denotes | ) |
T2936 | 626-627 | , | denotes | , |
T2937 | 628-639 | RB | denotes | potentially |
T2938 | 640-650 | VBG | denotes | accounting |
T2939 | 651-654 | IN | denotes | for |
T2940 | 655-658 | DT | denotes | the |
T2941 | 659-664 | JJ | denotes | basal |
T2942 | 665-670 | NN | denotes | NF-κB |
T2943 | 671-684 | NN | denotes | transcription |
T2944 | 685-693 | VBN | denotes | required |
T2945 | 694-697 | IN | denotes | for |
T2946 | 698-702 | NN | denotes | cell |
T2947 | 703-716 | NN | denotes | proliferation |
T2948 | 717-720 | CC | denotes | and |
T2949 | 721-729 | NN | denotes | survival |
T2950 | 729-730 | . | denotes | . |
T2951 | 731-740 | JJ | denotes | RPS3-IKKβ |
T2952 | 741-752 | NN | denotes | association |
T2953 | 753-756 | VBD | denotes | was |
T2954 | 757-764 | RB | denotes | clearly |
T2955 | 765-774 | VBN | denotes | augmented |
T2956 | 775-779 | IN | denotes | upon |
T2957 | 780-783 | NNP | denotes | TNF |
T2958 | 784-795 | NN | denotes | stimulation |
T2959 | 795-796 | , | denotes | , |
T2960 | 797-804 | VBG | denotes | peaking |
T2961 | 805-807 | IN | denotes | at |
T2962 | 808-810 | CD | denotes | 10 |
T2963 | 811-814 | NN | denotes | min |
T2964 | 814-815 | . | denotes | . |
T2965 | 816-817 | -LRB- | denotes | ( |
T2966 | 817-821 | NNP | denotes | Fig. |
T2967 | 822-824 | CD | denotes | 1d |
T2968 | 824-825 | -RRB- | denotes | ) |
T2969 | 825-826 | , | denotes | , |
T2970 | 827-836 | VBG | denotes | following |
T2971 | 837-844 | JJ | denotes | similar |
T2972 | 845-853 | NNS | denotes | kinetics |
T2973 | 854-856 | TO | denotes | to |
T2974 | 857-861 | CD | denotes | RPS3 |
T2975 | 862-868 | NN | denotes | serine |
T2976 | 869-884 | NN | denotes | phosphorylation |
T2977 | 885-886 | -LRB- | denotes | ( |
T2978 | 886-890 | NNP | denotes | Fig. |
T2979 | 891-893 | CD | denotes | 1b |
T2980 | 893-894 | -RRB- | denotes | ) |
T2981 | 894-895 | . | denotes | . |
T2982 | 896-898 | IN | denotes | By |
T2983 | 899-907 | NN | denotes | contrast |
T2984 | 907-908 | , | denotes | , |
T2985 | 909-914 | EX | denotes | there |
T2986 | 915-918 | VBD | denotes | was |
T2987 | 919-921 | DT | denotes | no |
T2988 | 922-932 | JJ | denotes | detectable |
T2989 | 933-944 | NN | denotes | interaction |
T2990 | 945-952 | IN | denotes | between |
T2991 | 953-957 | CD | denotes | RPS3 |
T2992 | 958-961 | CC | denotes | and |
T2993 | 962-966 | NNP | denotes | IKKα |
T2994 | 967-968 | -LRB- | denotes | ( |
T2995 | 968-972 | NNP | denotes | Fig. |
T2996 | 973-975 | CD | denotes | 1d |
T2997 | 975-976 | -RRB- | denotes | ) |
T2998 | 976-977 | . | denotes | . |
R2231 | T2826 | T2829 | nummod | RPS3,interaction |
R2232 | T2827 | T2826 | cc | and,RPS3 |
R2233 | T2828 | T2829 | compound | IKKβ,interaction |
R2234 | T2829 | T2857 | nsubj | interaction,is |
R2235 | T2830 | T2831 | det | The,activation |
R2236 | T2831 | T2842 | nsubj | activation,consisting |
R2237 | T2832 | T2831 | prep | of,activation |
R2238 | T2833 | T2834 | det | the,inhibitor |
R2239 | T2834 | T2832 | pobj | inhibitor,of |
R2240 | T2835 | T2834 | prep | of,inhibitor |
R2241 | T2836 | T2837 | compound | κB,kinase |
R2242 | T2837 | T2835 | pobj | kinase,of |
R2243 | T2838 | T2839 | punct | (,IKK |
R2244 | T2839 | T2837 | appos | IKK,kinase |
R2245 | T2840 | T2839 | punct | ),IKK |
R2246 | T2841 | T2831 | punct | ",",activation |
R2247 | T2842 | T2829 | acl | consisting,interaction |
R2248 | T2843 | T2842 | prep | of,consisting |
R2249 | T2844 | T2846 | det | a,subunit |
R2250 | T2845 | T2846 | amod | regulatory,subunit |
R2251 | T2846 | T2843 | pobj | subunit,of |
R2252 | T2847 | T2846 | appos | IKKγ,subunit |
R2253 | T2848 | T2842 | cc | and,consisting |
R2254 | T2849 | T2851 | nummod | two,subunits |
R2255 | T2850 | T2851 | amod | catalytic,subunits |
R2256 | T2851 | T2842 | conj | subunits,consisting |
R2257 | T2852 | T2851 | punct | ",",subunits |
R2258 | T2853 | T2851 | appos | IKKα,subunits |
R2259 | T2854 | T2853 | cc | and,IKKα |
R2260 | T2855 | T2853 | conj | IKKβ,IKKα |
R2261 | T2856 | T2857 | punct | ",",is |
R2262 | T2857 | T2857 | ROOT | is,is |
R2263 | T2858 | T2857 | acomp | critical,is |
R2264 | T2859 | T2858 | prep | for,critical |
R2265 | T2860 | T2861 | det | the,phosphorylation |
R2266 | T2861 | T2859 | pobj | phosphorylation,for |
R2267 | T2862 | T2861 | cc | and,phosphorylation |
R2268 | T2863 | T2861 | conj | dispatch,phosphorylation |
R2269 | T2864 | T2861 | prep | of,phosphorylation |
R2270 | T2865 | T2867 | det | the,IκBs |
R2271 | T2866 | T2867 | amod | inhibitory,IκBs |
R2272 | T2867 | T2864 | pobj | IκBs,of |
R2273 | T2868 | T2867 | cc | and,IκBs |
R2274 | T2869 | T2870 | det | the,liberation |
R2275 | T2870 | T2867 | conj | liberation,IκBs |
R2276 | T2871 | T2870 | prep | of,liberation |
R2277 | T2872 | T2871 | pobj | NF-κB20-22,of |
R2278 | T2873 | T2857 | punct | .,is |
R2279 | T2874 | T2891 | prep | Given,hypothesized |
R2280 | T2875 | T2879 | mark | that,found |
R2281 | T2876 | T2879 | nsubjpass | RPS3,found |
R2282 | T2877 | T2879 | aux | can,found |
R2283 | T2878 | T2879 | auxpass | be,found |
R2284 | T2879 | T2874 | pcomp | found,Given |
R2285 | T2880 | T2879 | prep | in,found |
R2286 | T2881 | T2885 | det | the,complex |
R2287 | T2882 | T2885 | amod | cytoplasmic,complex |
R2288 | T2883 | T2885 | compound | p65-p50-IκBα,complex |
R2289 | T2884 | T2885 | compound | inhibitory,complex |
R2290 | T2885 | T2880 | pobj | complex,in |
R2291 | T2886 | T2885 | prep | in,complex |
R2292 | T2887 | T2886 | pcomp | resting,in |
R2293 | T2888 | T2887 | dobj | cells6,resting |
R2294 | T2889 | T2891 | punct | ",",hypothesized |
R2295 | T2890 | T2891 | nsubj | we,hypothesized |
R2296 | T2891 | T2891 | ROOT | hypothesized,hypothesized |
R2297 | T2892 | T2897 | mark | that,bind |
R2298 | T2893 | T2894 | amod | activated,IKKβ |
R2299 | T2894 | T2897 | nsubj | IKKβ,bind |
R2300 | T2895 | T2897 | aux | might,bind |
R2301 | T2896 | T2897 | advmod | also,bind |
R2302 | T2897 | T2891 | ccomp | bind,hypothesized |
R2303 | T2898 | T2897 | prep | to,bind |
R2304 | T2899 | T2897 | cc | and,bind |
R2305 | T2900 | T2901 | compound | phosphorylate,RPS3 |
R2306 | T2901 | T2897 | conj | RPS3,bind |
R2307 | T2902 | T2891 | punct | .,hypothesized |
R2308 | T2903 | T2906 | advmod | First,found |
R2309 | T2904 | T2906 | punct | ",",found |
R2310 | T2905 | T2906 | nsubj | we,found |
R2311 | T2906 | T2906 | ROOT | found,found |
R2312 | T2907 | T2909 | mark | that,expressed |
R2313 | T2908 | T2909 | nsubj | ectopically,expressed |
R2314 | T2909 | T2906 | ccomp | expressed,found |
R2315 | T2910 | T2913 | nsubj | IKKβ,interacted |
R2316 | T2911 | T2910 | cc | and,IKKβ |
R2317 | T2912 | T2910 | conj | RPS3,IKKβ |
R2318 | T2913 | T2906 | conj | interacted,found |
R2319 | T2914 | T2913 | punct | (,interacted |
R2320 | T2915 | T2913 | dobj | Fig.,interacted |
R2321 | T2916 | T2915 | nummod | 1c,Fig. |
R2322 | T2917 | T2915 | punct | ),Fig. |
R2323 | T2918 | T2913 | punct | .,interacted |
R2324 | T2919 | T2921 | nsubj | We,examined |
R2325 | T2920 | T2921 | advmod | next,examined |
R2326 | T2921 | T2921 | ROOT | examined,examined |
R2327 | T2922 | T2921 | xcomp | resting,examined |
R2328 | T2923 | T2924 | compound | Jurkat,cells |
R2329 | T2924 | T2922 | dobj | cells,resting |
R2330 | T2925 | T2921 | cc | and,examined |
R2331 | T2926 | T2921 | conj | detected,examined |
R2332 | T2927 | T2931 | det | a,interaction |
R2333 | T2928 | T2931 | amod | modest,interaction |
R2334 | T2929 | T2931 | amod | endogenous,interaction |
R2335 | T2930 | T2931 | amod | IKKβ-RPS3,interaction |
R2336 | T2931 | T2926 | dobj | interaction,detected |
R2337 | T2932 | T2931 | punct | (,interaction |
R2338 | T2933 | T2931 | appos | Fig.,interaction |
R2339 | T2934 | T2933 | nummod | 1d,Fig. |
R2340 | T2935 | T2933 | punct | ),Fig. |
R2341 | T2936 | T2931 | punct | ",",interaction |
R2342 | T2937 | T2938 | advmod | potentially,accounting |
R2343 | T2938 | T2926 | advcl | accounting,detected |
R2344 | T2939 | T2938 | prep | for,accounting |
R2345 | T2940 | T2943 | det | the,transcription |
R2346 | T2941 | T2943 | amod | basal,transcription |
R2347 | T2942 | T2943 | compound | NF-κB,transcription |
R2348 | T2943 | T2939 | pobj | transcription,for |
R2349 | T2944 | T2943 | acl | required,transcription |
R2350 | T2945 | T2944 | prep | for,required |
R2351 | T2946 | T2947 | compound | cell,proliferation |
R2352 | T2947 | T2945 | pobj | proliferation,for |
R2353 | T2948 | T2947 | cc | and,proliferation |
R2354 | T2949 | T2947 | conj | survival,proliferation |
R2355 | T2950 | T2921 | punct | .,examined |
R2356 | T2951 | T2952 | amod | RPS3-IKKβ,association |
R2357 | T2952 | T2955 | nsubjpass | association,augmented |
R2358 | T2953 | T2955 | auxpass | was,augmented |
R2359 | T2954 | T2955 | advmod | clearly,augmented |
R2360 | T2955 | T2955 | ROOT | augmented,augmented |
R2361 | T2956 | T2955 | prep | upon,augmented |
R2362 | T2957 | T2958 | compound | TNF,stimulation |
R2363 | T2958 | T2956 | pobj | stimulation,upon |
R2364 | T2959 | T2955 | punct | ",",augmented |
R2365 | T2960 | T2955 | advcl | peaking,augmented |
R2366 | T2961 | T2960 | prep | at,peaking |
R2367 | T2962 | T2963 | nummod | 10,min |
R2368 | T2963 | T2961 | pobj | min,at |
R2369 | T2964 | T2955 | punct | .,augmented |
R2370 | T2965 | T2970 | punct | (,following |
R2371 | T2966 | T2966 | ROOT | Fig.,Fig. |
R2372 | T2967 | T2966 | nummod | 1d,Fig. |
R2373 | T2968 | T2966 | punct | ),Fig. |
R2374 | T2969 | T2970 | punct | ",",following |
R2375 | T2970 | T2970 | ROOT | following,following |
R2376 | T2971 | T2972 | amod | similar,kinetics |
R2377 | T2972 | T2970 | dobj | kinetics,following |
R2378 | T2973 | T2970 | prep | to,following |
R2379 | T2974 | T2976 | nummod | RPS3,phosphorylation |
R2380 | T2975 | T2976 | compound | serine,phosphorylation |
R2381 | T2976 | T2973 | pobj | phosphorylation,to |
R2382 | T2977 | T2976 | punct | (,phosphorylation |
R2383 | T2978 | T2976 | appos | Fig.,phosphorylation |
R2384 | T2979 | T2978 | nummod | 1b,Fig. |
R2385 | T2980 | T2976 | punct | ),phosphorylation |
R2386 | T2981 | T2970 | punct | .,following |
R2387 | T2982 | T2986 | prep | By,was |
R2388 | T2983 | T2982 | pobj | contrast,By |
R2389 | T2984 | T2986 | punct | ",",was |
R2390 | T2985 | T2986 | expl | there,was |
R2391 | T2986 | T2986 | ROOT | was,was |
R2392 | T2987 | T2989 | det | no,interaction |
R2393 | T2988 | T2989 | amod | detectable,interaction |
R2394 | T2989 | T2986 | attr | interaction,was |
R2395 | T2990 | T2989 | prep | between,interaction |
R2396 | T2991 | T2990 | pobj | RPS3,between |
R2397 | T2992 | T2991 | cc | and,RPS3 |
R2398 | T2993 | T2991 | conj | IKKα,RPS3 |
R2399 | T2994 | T2995 | punct | (,Fig. |
R2400 | T2995 | T2993 | appos | Fig.,IKKα |
R2401 | T2996 | T2995 | nummod | 1d,Fig. |
R2402 | T2997 | T2993 | punct | ),IKKα |
R2403 | T2998 | T2986 | punct | .,was |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3039 | 30-63 | http://purl.obolibrary.org/obo/GO_1903721 | denotes | activation of the inhibitor of κB |
T3040 | 72-75 | http://purl.obolibrary.org/obo/GO_0008384 | denotes | IKK |
T3041 | 181-196 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
T3042 | 869-884 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
T3043 | 671-684 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcription |
T3044 | 698-716 | http://purl.obolibrary.org/obo/GO_0008283 | denotes | cell proliferation |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3045 | 72-75 | http://purl.obolibrary.org/obo/GO_0008384 | denotes | IKK |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3046 | 556-561 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T3047 | 698-702 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2634 | 0-25 | Sentence | denotes | RPS3 and IKKβ interaction |
T2635 | 26-266 | Sentence | denotes | The activation of the inhibitor of κB kinase (IKK), consisting of a regulatory subunit IKKγ and two catalytic subunits, IKKα and IKKβ, is critical for the phosphorylation and dispatch of the inhibitory IκBs and the liberation of NF-κB20-22. |
T2636 | 267-444 | Sentence | denotes | Given that RPS3 can be found in the cytoplasmic p65-p50-IκBα inhibitory complex in resting cells6, we hypothesized that activated IKKβ might also bind to and phosphorylate RPS3. |
T2637 | 445-523 | Sentence | denotes | First, we found that ectopically expressed IKKβ and RPS3 interacted (Fig. 1c). |
T2638 | 524-730 | Sentence | denotes | We next examined resting Jurkat cells and detected a modest endogenous IKKβ-RPS3 interaction (Fig. 1d), potentially accounting for the basal NF-κB transcription required for cell proliferation and survival. |
T2639 | 731-895 | Sentence | denotes | RPS3-IKKβ association was clearly augmented upon TNF stimulation, peaking at 10 min. (Fig. 1d), following similar kinetics to RPS3 serine phosphorylation (Fig. 1b). |
T2640 | 896-977 | Sentence | denotes | By contrast, there was no detectable interaction between RPS3 and IKKα (Fig. 1d). |
T31 | 0-25 | Sentence | denotes | RPS3 and IKKβ interaction |
T32 | 26-266 | Sentence | denotes | The activation of the inhibitor of κB kinase (IKK), consisting of a regulatory subunit IKKγ and two catalytic subunits, IKKα and IKKβ, is critical for the phosphorylation and dispatch of the inhibitory IκBs and the liberation of NF-κB20-22. |
T33 | 267-444 | Sentence | denotes | Given that RPS3 can be found in the cytoplasmic p65-p50-IκBα inhibitory complex in resting cells6, we hypothesized that activated IKKβ might also bind to and phosphorylate RPS3. |
T34 | 445-523 | Sentence | denotes | First, we found that ectopically expressed IKKβ and RPS3 interacted (Fig. 1c). |
T35 | 524-730 | Sentence | denotes | We next examined resting Jurkat cells and detected a modest endogenous IKKβ-RPS3 interaction (Fig. 1d), potentially accounting for the basal NF-κB transcription required for cell proliferation and survival. |
T36 | 731-895 | Sentence | denotes | RPS3-IKKβ association was clearly augmented upon TNF stimulation, peaking at 10 min. (Fig. 1d), following similar kinetics to RPS3 serine phosphorylation (Fig. 1b). |
T37 | 896-977 | Sentence | denotes | By contrast, there was no detectable interaction between RPS3 and IKKα (Fig. 1d). |
events-check-again
Id | Subject | Object | Predicate | Lexical cue | Negation | Speculation |
---|---|---|---|---|---|---|
T3194 | 0-4 | Protein | denotes | RPS3 | ||
T3195 | 9-13 | Protein | denotes | IKKβ | ||
T3196 | 14-25 | Binding | denotes | interaction | true | |
T3197 | 113-117 | Protein | denotes | IKKγ | ||
T3198 | 146-150 | Protein | denotes | IKKα | ||
T3199 | 155-159 | Protein | denotes | IKKβ | ||
T3200 | 278-282 | Protein | denotes | RPS3 | ||
T3201 | 315-318 | Protein | denotes | p65 | ||
T3202 | 319-322 | Protein | denotes | p50 | ||
T3203 | 323-327 | Protein | denotes | IκBα | ||
T3204 | 387-396 | Positive_regulation | denotes | activated | ||
T3205 | 397-401 | Protein | denotes | IKKβ | ||
T3206 | 413-417 | Binding | denotes | bind | true | |
T3207 | 425-438 | Phosphorylation | denotes | phosphorylate | true | |
T3208 | 439-443 | Protein | denotes | RPS3 | ||
T3209 | 478-487 | Gene_expression | denotes | expressed | ||
T3210 | 488-492 | Protein | denotes | IKKβ | ||
T3211 | 497-501 | Protein | denotes | RPS3 | ||
T3212 | 502-512 | Binding | denotes | interacted | ||
T3213 | 595-599 | Protein | denotes | IKKβ | ||
T3214 | 600-604 | Protein | denotes | RPS3 | ||
T3215 | 605-616 | Binding | denotes | interaction | ||
T3216 | 731-735 | Protein | denotes | RPS3 | ||
T3217 | 736-740 | Protein | denotes | IKKβ | ||
T3218 | 741-752 | Binding | denotes | association | ||
T3219 | 765-774 | Positive_regulation | denotes | augmented | ||
T3220 | 827-836 | Positive_regulation | denotes | following | ||
T3221 | 857-861 | Protein | denotes | RPS3 | ||
T3222 | 862-868 | Entity | denotes | serine | ||
T3223 | 869-884 | Phosphorylation | denotes | phosphorylation | ||
T3224 | 933-944 | Binding | denotes | interaction | true | |
T3225 | 953-957 | Protein | denotes | RPS3 | ||
T3226 | 962-966 | Protein | denotes | IKKα | ||
R2507 | T3194 | T3196 | themeOf | RPS3,interaction | ||
R2508 | T3195 | T3196 | themeOf | IKKβ,interaction | ||
R2509 | T3205 | T3204 | themeOf | IKKβ,activated | ||
R2510 | T3205 | T3206 | themeOf | IKKβ,bind | ||
R2511 | T3208 | T3206 | themeOf | RPS3,bind | ||
R2512 | T3208 | T3207 | themeOf | RPS3,phosphorylate | ||
R2513 | T3210 | T3209 | themeOf | IKKβ,expressed | ||
R2514 | T3210 | T3212 | themeOf | IKKβ,interacted | ||
R2515 | T3211 | T3212 | themeOf | RPS3,interacted | ||
R2516 | T3213 | T3215 | themeOf | IKKβ,interaction | ||
R2517 | T3214 | T3215 | themeOf | RPS3,interaction | ||
R2518 | T3216 | T3218 | themeOf | RPS3,association | ||
R2519 | T3217 | T3218 | themeOf | IKKβ,association | ||
R2520 | T3218 | T3219 | themeOf | association,augmented | ||
R2521 | T3219 | T3220 | causeOf | augmented,following | ||
R2522 | T3222 | T3223 | themeOf | serine,phosphorylation | ||
R2523 | T3222 | T3221 | partOf | serine,RPS3 | ||
R2524 | T3223 | T3220 | themeOf | phosphorylation,following | ||
R2525 | T3225 | T3224 | themeOf | RPS3,interaction | ||
R2526 | T3226 | T3224 | themeOf | IKKα,interaction |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3048 | 0-4 | Protein | denotes | RPS3 |
T3049 | 9-13 | Protein | denotes | IKKβ |
T3050 | 61-70 | Protein | denotes | κB kinase |
T3051 | 72-75 | Protein | denotes | IKK |
T3052 | 105-117 | Protein | denotes | subunit IKKγ |
T3053 | 146-150 | Protein | denotes | IKKα |
T3054 | 155-159 | Protein | denotes | IKKβ |
T3055 | 48-57 | Negative_regulation | denotes | inhibitor |
T3056 | 48-57 | Negative_regulation | denotes | inhibitor |
T3057 | 78-88 | Gene_expression | denotes | consisting |
T3058 | 78-88 | Gene_expression | denotes | consisting |
T3059 | 78-88 | Gene_expression | denotes | consisting |
T3060 | 30-40 | Positive_regulation | denotes | activation |
T3061 | 30-40 | Positive_regulation | denotes | activation |
T3062 | 48-57 | Negative_regulation | denotes | inhibitor |
T3063 | 48-57 | Negative_regulation | denotes | inhibitor |
T3064 | 48-57 | Negative_regulation | denotes | inhibitor |
T3065 | 278-282 | Protein | denotes | RPS3 |
T3066 | 315-318 | Protein | denotes | p65 |
T3067 | 319-322 | Protein | denotes | p50 |
T3068 | 323-327 | Protein | denotes | IκBα |
T3069 | 397-401 | Protein | denotes | IKKβ |
T3070 | 439-443 | Protein | denotes | RPS3 |
T3071 | 290-295 | Binding | denotes | found |
T3072 | 387-396 | Positive_regulation | denotes | activated |
T3073 | 413-417 | Binding | denotes | bind |
T3074 | 425-438 | Phosphorylation | denotes | phosphorylate |
T3075 | 425-438 | Phosphorylation | denotes | phosphorylate |
T3076 | 488-492 | Protein | denotes | IKKβ |
T3077 | 497-501 | Protein | denotes | RPS3 |
T3078 | 514-521 | Protein | denotes | Fig. 1c |
T3079 | 478-487 | Gene_expression | denotes | expressed |
T3080 | 478-487 | Gene_expression | denotes | expressed |
T3081 | 502-512 | Binding | denotes | interacted |
T3082 | 502-512 | Binding | denotes | interacted |
T3083 | 502-512 | Binding | denotes | interacted |
T3084 | 595-599 | Protein | denotes | IKKβ |
T3085 | 600-604 | Protein | denotes | RPS3 |
T3086 | 665-670 | Protein | denotes | NF-κB |
T3087 | 605-616 | Binding | denotes | interaction |
T3088 | 671-684 | Transcription | denotes | transcription |
T3089 | 731-735 | Protein | denotes | RPS3 |
T3090 | 736-740 | Protein | denotes | IKKβ |
T3091 | 780-783 | Protein | denotes | TNF |
T3092 | 857-861 | Protein | denotes | RPS3 |
T3093 | 862-868 | Entity | denotes | serine |
T3094 | 869-884 | Phosphorylation | denotes | phosphorylation |
T3095 | 953-957 | Protein | denotes | RPS3 |
T3096 | 962-966 | Protein | denotes | IKKα |
T3097 | 968-975 | Protein | denotes | Fig. 1d |
T3098 | 933-944 | Binding | denotes | interaction |
R2424 | T3050 | T3055 | themeOf | κB kinase,inhibitor |
R2425 | T3051 | T3056 | themeOf | IKK,inhibitor |
R2426 | T3052 | T3057 | themeOf | subunit IKKγ,consisting |
R2427 | T3053 | T3058 | themeOf | IKKα,consisting |
R2428 | T3054 | T3059 | themeOf | IKKβ,consisting |
R2429 | T3055 | T3060 | themeOf | inhibitor,activation |
R2430 | T3056 | T3061 | themeOf | inhibitor,activation |
R2431 | T3057 | T3062 | themeOf | consisting,inhibitor |
R2432 | T3058 | T3063 | themeOf | consisting,inhibitor |
R2433 | T3059 | T3064 | themeOf | consisting,inhibitor |
R2434 | T3065 | T3071 | themeOf | RPS3,found |
R2435 | T3068 | T3071 | themeOf | IκBα,found |
R2436 | T3069 | T3072 | themeOf | IKKβ,activated |
R2437 | T3069 | T3073 | themeOf | IKKβ,bind |
R2438 | T3069 | T3074 | themeOf | IKKβ,phosphorylate |
R2439 | T3070 | T3075 | themeOf | RPS3,phosphorylate |
R2440 | T3076 | T3079 | themeOf | IKKβ,expressed |
R2441 | T3076 | T3081 | themeOf | IKKβ,interacted |
R2442 | T3077 | T3080 | themeOf | RPS3,expressed |
R2443 | T3077 | T3082 | themeOf | RPS3,interacted |
R2444 | T3078 | T3083 | themeOf | Fig. 1c,interacted |
R2445 | T3084 | T3087 | themeOf | IKKβ,interaction |
R2446 | T3085 | T3087 | themeOf | RPS3,interaction |
R2447 | T3086 | T3088 | themeOf | NF-κB,transcription |
R2448 | T3092 | T3094 | themeOf | RPS3,phosphorylation |
R2449 | T3092 | T3093 | partOf | RPS3,serine |
R2450 | T3093 | T3094 | Site | serine,phosphorylation |
R2451 | T3095 | T3098 | themeOf | RPS3,interaction |
R2452 | T3096 | T3098 | themeOf | IKKα,interaction |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue | Negation | Speculation |
---|---|---|---|---|---|---|
T2601 | 0-4 | Protein | denotes | RPS3 | ||
T2602 | 9-13 | Protein | denotes | IKKβ | ||
T2603 | 14-25 | Binding | denotes | interaction | true | |
T2604 | 113-117 | Protein | denotes | IKKγ | ||
T2605 | 146-150 | Protein | denotes | IKKα | ||
T2606 | 155-159 | Protein | denotes | IKKβ | ||
T2607 | 278-282 | Protein | denotes | RPS3 | ||
T2608 | 315-318 | Protein | denotes | p65 | ||
T2609 | 319-322 | Protein | denotes | p50 | ||
T2610 | 323-327 | Protein | denotes | IκBα | ||
T2611 | 387-396 | Positive_regulation | denotes | activated | ||
T2612 | 397-401 | Protein | denotes | IKKβ | ||
T2613 | 413-417 | Binding | denotes | bind | true | |
T2614 | 425-438 | Phosphorylation | denotes | phosphorylate | true | |
T2615 | 439-443 | Protein | denotes | RPS3 | ||
T2616 | 478-487 | Gene_expression | denotes | expressed | ||
T2617 | 488-492 | Protein | denotes | IKKβ | ||
T2618 | 497-501 | Protein | denotes | RPS3 | ||
T2619 | 502-512 | Binding | denotes | interacted | ||
T2620 | 595-599 | Protein | denotes | IKKβ | ||
T2621 | 600-604 | Protein | denotes | RPS3 | ||
T2622 | 605-616 | Binding | denotes | interaction | ||
T2623 | 731-735 | Protein | denotes | RPS3 | ||
T2624 | 736-740 | Protein | denotes | IKKβ | ||
T2625 | 741-752 | Binding | denotes | association | ||
T2626 | 765-774 | Positive_regulation | denotes | augmented | ||
T2627 | 827-836 | Positive_regulation | denotes | following | ||
T2628 | 857-861 | Protein | denotes | RPS3 | ||
T2629 | 862-868 | Entity | denotes | serine | ||
T2630 | 869-884 | Phosphorylation | denotes | phosphorylation | ||
T2631 | 933-944 | Binding | denotes | interaction | true | |
T2632 | 953-957 | Protein | denotes | RPS3 | ||
T2633 | 962-966 | Protein | denotes | IKKα | ||
R2042 | T2601 | T2603 | themeOf | RPS3,interaction | ||
R2043 | T2602 | T2603 | themeOf | IKKβ,interaction | ||
R2044 | T2612 | T2611 | themeOf | IKKβ,activated | ||
R2045 | T2612 | T2613 | themeOf | IKKβ,bind | ||
R2046 | T2615 | T2613 | themeOf | RPS3,bind | ||
R2047 | T2615 | T2614 | themeOf | RPS3,phosphorylate | ||
R2048 | T2617 | T2616 | themeOf | IKKβ,expressed | ||
R2049 | T2617 | T2619 | themeOf | IKKβ,interacted | ||
R2050 | T2618 | T2619 | themeOf | RPS3,interacted | ||
R2051 | T2620 | T2622 | themeOf | IKKβ,interaction | ||
R2052 | T2621 | T2622 | themeOf | RPS3,interaction | ||
R2053 | T2623 | T2625 | themeOf | RPS3,association | ||
R2054 | T2624 | T2625 | themeOf | IKKβ,association | ||
R2055 | T2625 | T2626 | themeOf | association,augmented | ||
R2056 | T2626 | T2627 | causeOf | augmented,following | ||
R2057 | T2629 | T2630 | themeOf | serine,phosphorylation | ||
R2058 | T2629 | T2628 | partOf | serine,RPS3 | ||
R2059 | T2630 | T2627 | themeOf | phosphorylation,following | ||
R2060 | T2632 | T2631 | themeOf | RPS3,interaction | ||
R2061 | T2633 | T2631 | themeOf | IKKα,interaction |
test2
Id | Subject | Object | Predicate | Lexical cue | Negation | Speculation |
---|---|---|---|---|---|---|
T2568 | 0-4 | Protein | denotes | RPS3 | true | |
T2569 | 9-13 | Protein | denotes | IKKβ | ||
T2570 | 14-25 | Binding | denotes | interaction | true | |
T2571 | 113-117 | Protein | denotes | IKKγ | true | |
T2572 | 146-150 | Protein | denotes | IKKα | ||
T2573 | 155-159 | Protein | denotes | IKKβ | ||
T2574 | 164-172 | Positive_regulation | denotes | critical | ||
T2575 | 278-282 | Protein | denotes | RPS3 | ||
T2576 | 315-318 | Protein | denotes | p65 | ||
T2577 | 319-322 | Protein | denotes | p50 | ||
T2578 | 323-327 | Protein | denotes | IκBα | ||
T2579 | 387-396 | Positive_regulation | denotes | activated | true | |
T2580 | 397-401 | Protein | denotes | IKKβ | ||
T2581 | 413-417 | Binding | denotes | bind | ||
T2582 | 425-438 | Phosphorylation | denotes | phosphorylate | ||
T2583 | 439-443 | Protein | denotes | RPS3 | ||
T2584 | 478-487 | Gene_expression | denotes | expressed | ||
T2585 | 488-492 | Protein | denotes | IKKβ | ||
T2586 | 497-501 | Protein | denotes | RPS3 | ||
T2587 | 502-512 | Binding | denotes | interacted | ||
T2588 | 595-599 | Protein | denotes | IKKβ | ||
T2589 | 600-604 | Protein | denotes | RPS3 | ||
T2590 | 605-616 | Binding | denotes | interaction | ||
T2591 | 731-735 | Protein | denotes | RPS3 | ||
T2592 | 736-740 | Protein | denotes | IKKβ | ||
T2593 | 741-752 | Binding | denotes | association | ||
T2594 | 765-774 | Positive_regulation | denotes | augmented | ||
T2595 | 857-861 | Protein | denotes | RPS3 | ||
T2596 | 862-868 | Entity | denotes | serine | ||
T2597 | 869-884 | Phosphorylation | denotes | phosphorylation | ||
T2598 | 933-944 | Binding | denotes | interaction | ||
T2599 | 953-957 | Protein | denotes | RPS3 | ||
T2600 | 962-966 | Protein | denotes | IKKα | ||
R2023 | T2568 | T2570 | themeOf | RPS3,interaction | ||
R2024 | T2569 | T2570 | themeOf | IKKβ,interaction | ||
R2025 | T2580 | T2579 | themeOf | IKKβ,activated | ||
R2026 | T2580 | T2581 | themeOf | IKKβ,bind | ||
R2027 | T2583 | T2582 | themeOf | RPS3,phosphorylate | ||
R2028 | T2583 | T2581 | themeOf | RPS3,bind | ||
R2029 | T2585 | T2584 | themeOf | IKKβ,expressed | ||
R2030 | T2585 | T2587 | themeOf | IKKβ,interacted | ||
R2031 | T2586 | T2587 | themeOf | RPS3,interacted | ||
R2032 | T2586 | T2584 | themeOf | RPS3,expressed | ||
R2033 | T2588 | T2590 | themeOf | IKKβ,interaction | ||
R2034 | T2589 | T2590 | themeOf | RPS3,interaction | ||
R2035 | T2591 | T2593 | themeOf | RPS3,association | ||
R2036 | T2592 | T2593 | themeOf | IKKβ,association | ||
R2037 | T2593 | T2594 | themeOf | association,augmented | ||
R2038 | T2596 | T2597 | themeOf | serine,phosphorylation | ||
R2039 | T2596 | T2595 | partOf | serine,RPS3 | ||
R2040 | T2599 | T2598 | themeOf | RPS3,interaction | ||
R2041 | T2600 | T2598 | themeOf | IKKα,interaction |