PMC:3062687 / 344-482
Annnotations
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T243 | 20-24 | O14920 | denotes | IKKβ |
| T244 | 78-82 | P23396 | denotes | RPS3 |
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T150 | 0-4 | RB | denotes | Here |
| T151 | 5-7 | PRP | denotes | we |
| T152 | 8-14 | VB | denotes | report |
| T153 | 15-19 | IN | denotes | that |
| T154 | 20-24 | NN | denotes | IKKβ |
| T155 | 25-40 | NN | denotes | phosphorylation |
| T156 | 41-43 | IN | denotes | of |
| T157 | 44-50 | NN | denotes | serine |
| T158 | 51-54 | CD | denotes | 209 |
| T159 | 55-56 | -LRB- | denotes | ( |
| T160 | 56-60 | NN | denotes | S209 |
| T161 | 60-61 | -RRB- | denotes | ) |
| T162 | 62-65 | VB | denotes | was |
| T163 | 66-73 | JJ | denotes | crucial |
| T164 | 74-77 | IN | denotes | for |
| T165 | 78-82 | NN | denotes | RPS3 |
| T166 | 83-90 | JJ | denotes | nuclear |
| T167 | 91-103 | NN | denotes | localization |
| T168 | 104-106 | IN | denotes | in |
| T169 | 107-115 | NN | denotes | response |
| T170 | 116-118 | TO | denotes | to |
| T171 | 119-129 | VB | denotes | activating |
| T172 | 130-137 | NN | denotes | stimuli |
| R127 | T151 | T152 | arg1Of | we,report |
| R128 | T152 | T150 | arg1Of | report,Here |
| R129 | T155 | T154 | arg1Of | phosphorylation,IKKβ |
| R130 | T155 | T156 | arg1Of | phosphorylation,of |
| R131 | T155 | T162 | arg1Of | phosphorylation,was |
| R132 | T155 | T163 | arg1Of | phosphorylation,crucial |
| R133 | T157 | T156 | arg2Of | serine,of |
| R134 | T157 | T158 | arg1Of | serine,209 |
| R135 | T157 | T159 | arg1Of | serine,( |
| R136 | T160 | T159 | arg2Of | S209,( |
| R137 | T161 | T159 | arg3Of | ),( |
| R138 | T162 | T152 | arg2Of | was,report |
| R139 | T162 | T153 | arg1Of | was,that |
| R140 | T162 | T168 | arg1Of | was,in |
| R141 | T163 | T162 | arg2Of | crucial,was |
| R142 | T163 | T164 | arg1Of | crucial,for |
| R143 | T167 | T164 | arg2Of | localization,for |
| R144 | T167 | T165 | arg1Of | localization,RPS3 |
| R145 | T167 | T166 | arg1Of | localization,nuclear |
| R146 | T168 | T170 | arg1Of | in,to |
| R147 | T169 | T168 | arg2Of | response,in |
| R148 | T172 | T168 | arg3Of | stimuli,in |
| R149 | T172 | T171 | arg1Of | stimuli,activating |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T302 | 0-4 | RB | denotes | Here |
| T303 | 5-7 | PRP | denotes | we |
| T304 | 8-14 | VBP | denotes | report |
| T305 | 15-19 | IN | denotes | that |
| T306 | 20-24 | NNP | denotes | IKKβ |
| T307 | 25-40 | NN | denotes | phosphorylation |
| T308 | 41-43 | IN | denotes | of |
| T309 | 44-50 | NN | denotes | serine |
| T310 | 51-54 | CD | denotes | 209 |
| T311 | 55-56 | -LRB- | denotes | ( |
| T312 | 56-60 | CD | denotes | S209 |
| T313 | 60-61 | -RRB- | denotes | ) |
| T314 | 62-65 | VBD | denotes | was |
| T315 | 66-73 | JJ | denotes | crucial |
| T316 | 74-77 | IN | denotes | for |
| T317 | 78-82 | JJ | denotes | RPS3 |
| T318 | 83-90 | JJ | denotes | nuclear |
| T319 | 91-103 | NN | denotes | localization |
| T320 | 104-106 | IN | denotes | in |
| T321 | 107-115 | NN | denotes | response |
| T322 | 116-118 | TO | denotes | to |
| T323 | 119-129 | VBG | denotes | activating |
| T324 | 130-137 | NNS | denotes | stimuli |
| T325 | 137-138 | . | denotes | . |
| R236 | T302 | T304 | advmod | Here,report |
| R237 | T303 | T304 | nsubj | we,report |
| R238 | T304 | T304 | ROOT | report,report |
| R239 | T305 | T314 | mark | that,was |
| R240 | T306 | T307 | compound | IKKβ,phosphorylation |
| R241 | T307 | T314 | nsubj | phosphorylation,was |
| R242 | T308 | T307 | prep | of,phosphorylation |
| R243 | T309 | T308 | pobj | serine,of |
| R244 | T310 | T309 | nummod | 209,serine |
| R245 | T311 | T309 | punct | (,serine |
| R246 | T312 | T309 | appos | S209,serine |
| R247 | T313 | T309 | punct | ),serine |
| R248 | T314 | T304 | ccomp | was,report |
| R249 | T315 | T314 | acomp | crucial,was |
| R250 | T316 | T315 | prep | for,crucial |
| R251 | T317 | T319 | amod | RPS3,localization |
| R252 | T318 | T319 | amod | nuclear,localization |
| R253 | T319 | T316 | pobj | localization,for |
| R254 | T320 | T319 | prep | in,localization |
| R255 | T321 | T320 | pobj | response,in |
| R256 | T322 | T321 | prep | to,response |
| R257 | T323 | T322 | pcomp | activating,to |
| R258 | T324 | T323 | dobj | stimuli,activating |
| R259 | T325 | T304 | punct | .,report |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T433 | 25-40 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
| T437 | 91-103 | http://purl.obolibrary.org/obo/GO_0051179 | denotes | localization |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T97 | 0-138 | Sentence | denotes | Here we report that IKKβ phosphorylation of serine 209 (S209) was crucial for RPS3 nuclear localization in response to activating stimuli. |
| T5 | 0-138 | Sentence | denotes | Here we report that IKKβ phosphorylation of serine 209 (S209) was crucial for RPS3 nuclear localization in response to activating stimuli. |
events-check-again
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T574 | 20-24 | Protein | denotes | IKKβ |
| T575 | 25-40 | Phosphorylation | denotes | phosphorylation |
| T576 | 44-54 | Entity | denotes | serine 209 |
| T577 | 66-73 | Positive_regulation | denotes | crucial |
| T578 | 78-82 | Protein | denotes | RPS3 |
| T579 | 83-90 | Entity | denotes | nuclear |
| T580 | 91-103 | Localization | denotes | localization |
| T581 | 104-118 | Positive_regulation | denotes | in response to |
| T582 | 119-129 | Positive_regulation | denotes | activating |
| R448 | T575 | T577 | causeOf | phosphorylation,crucial |
| R449 | T576 | T575 | themeOf | serine 209,phosphorylation |
| R450 | T576 | T574 | partOf | serine 209,IKKβ |
| R451 | T578 | T580 | themeOf | RPS3,localization |
| R452 | T578 | T582 | themeOf | RPS3,activating |
| R453 | T579 | T580 | locationOf | nuclear,localization |
| R454 | T580 | T581 | themeOf | localization,in response to |
| R455 | T581 | T577 | themeOf | in response to,crucial |
| R456 | T582 | T581 | causeOf | activating,in response to |
bionlp-st-ge-2016-reference-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T514 | 20-24 | Protein | denotes | IKKβ |
| T515 | 78-82 | Protein | denotes | RPS3 |
| T516 | 25-40 | Phosphorylation | denotes | phosphorylation |
| T517 | 83-90 | Entity | denotes | nuclear |
| T518 | 91-103 | Localization | denotes | localization |
| T519 | 66-73 | Positive_regulation | denotes | crucial |
| R403 | T514 | T516 | themeOf | IKKβ,phosphorylation |
| R404 | T515 | T518 | themeOf | RPS3,localization |
| R405 | T516 | T519 | causeOf | phosphorylation,crucial |
| R406 | T517 | T518 | locationOf | nuclear,localization |
| R407 | T518 | T519 | themeOf | localization,crucial |
bionlp-st-ge-2016-reference
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T74 | 20-24 | Protein | denotes | IKKβ |
| T75 | 25-40 | Phosphorylation | denotes | phosphorylation |
| T76 | 44-54 | Entity | denotes | serine 209 |
| T77 | 66-73 | Positive_regulation | denotes | crucial |
| T78 | 78-82 | Protein | denotes | RPS3 |
| T79 | 83-90 | Entity | denotes | nuclear |
| T80 | 91-103 | Localization | denotes | localization |
| T81 | 104-118 | Positive_regulation | denotes | in response to |
| T82 | 119-129 | Positive_regulation | denotes | activating |
| R60 | T75 | T77 | causeOf | phosphorylation,crucial |
| R61 | T76 | T75 | themeOf | serine 209,phosphorylation |
| R62 | T76 | T74 | partOf | serine 209,IKKβ |
| R63 | T78 | T80 | themeOf | RPS3,localization |
| R64 | T78 | T82 | themeOf | RPS3,activating |
| R65 | T79 | T80 | locationOf | nuclear,localization |
| R66 | T80 | T81 | themeOf | localization,in response to |
| R67 | T81 | T77 | themeOf | in response to,crucial |
| R68 | T82 | T81 | causeOf | activating,in response to |
test2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T45 | 20-24 | Protein | denotes | IKKβ |
| T46 | 25-40 | Phosphorylation | denotes | phosphorylation |
| T47 | 44-54 | Entity | denotes | serine 209 |
| T48 | 66-73 | Positive_regulation | denotes | crucial |
| T49 | 78-82 | Protein | denotes | RPS3 |
| T50 | 83-90 | Entity | denotes | nuclear |
| T51 | 91-103 | Localization | denotes | localization |
| T52 | 104-118 | Positive_regulation | denotes | in response to |
| R37 | T46 | T48 | causeOf | phosphorylation,crucial |
| R38 | T47 | T46 | themeOf | serine 209,phosphorylation |
| R39 | T47 | T45 | partOf | serine 209,IKKβ |
| R40 | T49 | T51 | themeOf | RPS3,localization |
| R41 | T50 | T51 | locationOf | nuclear,localization |
| R42 | T51 | T52 | themeOf | localization,in response to |
| R43 | T51 | T48 | themeOf | localization,crucial |
| R44 | T52 | T48 | themeOf | in response to,crucial |