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PMC:3062687 / 32213-32404 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T21796 0-7 NN denotes Pellets
T21797 8-12 VB denotes were
T21798 13-22 VB denotes incubated
T21799 23-25 IN denotes in
T21800 26-32 NNP denotes Buffer
T21801 33-34 NNP denotes C
T21802 35-36 -LRB- denotes (
T21803 36-38 CD denotes 20
T21804 39-41 NN denotes mM
T21805 42-47 NN denotes HEPES
T21806 48-53 NN denotes pH7.9
T21807 53-54 -COMMA- denotes ,
T21808 55-58 CD denotes 420
T21809 59-61 NN denotes mM
T21810 62-66 NN denotes NaCl
T21811 66-67 -COMMA- denotes ,
T21812 68-71 CD denotes 1.5
T21813 72-74 NN denotes mM
T21814 75-80 NN denotes MgCl2
T21815 80-81 -COMMA- denotes ,
T21816 82-84 CD denotes 25
T21817 84-85 NN denotes %
T21818 86-94 NN denotes glycerol
T21819 94-95 -COMMA- denotes ,
T21820 96-99 CD denotes 0.5
T21821 100-102 NN denotes mM
T21822 103-107 NN denotes PMSF
T21823 107-108 -COMMA- denotes ,
T21824 109-112 CD denotes 0.2
T21825 113-115 NN denotes mM
T21826 116-120 NN denotes EDTA
T21827 120-121 -COMMA- denotes ,
T21828 122-125 CD denotes 0.5
T21829 126-128 NN denotes mM
T21830 129-132 NN denotes DTT
T21831 132-133 -COMMA- denotes ,
T21832 134-142 JJ denotes complete
T21833 143-151 NN denotes protease
T21834 152-161 NN denotes inhibitor
T21835 162-170 NN denotes cocktail
T21836 170-171 -RRB- denotes )
T21837 172-174 IN denotes at
T21838 175-176 CD denotes 4
T21839 177-179 NN denotes °C
T21840 180-183 IN denotes for
T21841 184-186 CD denotes 10
T21842 187-190 NN denotes min
R17338 T21796 T21797 arg1Of Pellets,were
R17339 T21796 T21798 arg2Of Pellets,incubated
R17340 T21798 T21797 arg2Of incubated,were
R17341 T21798 T21799 arg1Of incubated,in
R17342 T21801 T21799 arg2Of C,in
R17343 T21801 T21800 arg1Of C,Buffer
R17344 T21801 T21802 arg1Of C,(
R17345 T21801 T21837 arg1Of C,at
R17346 T21806 T21803 arg1Of pH7.9,20
R17347 T21806 T21804 arg1Of pH7.9,mM
R17348 T21806 T21805 arg1Of pH7.9,HEPES
R17349 T21806 T21807 arg1Of pH7.9,","
R17350 T21807 T21811 arg1Of ",",","
R17351 T21808 T21809 arg1Of 420,mM
R17352 T21810 T21807 arg2Of NaCl,","
R17353 T21810 T21808 arg1Of NaCl,420
R17354 T21811 T21815 arg1Of ",",","
R17355 T21812 T21813 arg1Of 1.5,mM
R17356 T21814 T21811 arg2Of MgCl2,","
R17357 T21814 T21812 arg1Of MgCl2,1.5
R17358 T21815 T21819 arg1Of ",",","
R17359 T21816 T21817 arg1Of 25,%
R17360 T21818 T21815 arg2Of glycerol,","
R17361 T21818 T21816 arg1Of glycerol,25
R17362 T21819 T21802 arg2Of ",",(
R17363 T21820 T21821 arg1Of 0.5,mM
R17364 T21822 T21820 arg1Of PMSF,0.5
R17365 T21822 T21823 arg1Of PMSF,","
R17366 T21823 T21827 arg1Of ",",","
R17367 T21824 T21825 arg1Of 0.2,mM
R17368 T21826 T21823 arg2Of EDTA,","
R17369 T21826 T21824 arg1Of EDTA,0.2
R17370 T21827 T21831 arg1Of ",",","
R17371 T21828 T21829 arg1Of 0.5,mM
R17372 T21830 T21827 arg2Of DTT,","
R17373 T21830 T21828 arg1Of DTT,0.5
R17374 T21831 T21819 arg2Of ",",","
R17375 T21835 T21831 arg2Of cocktail,","
R17376 T21835 T21832 arg1Of cocktail,complete
R17377 T21835 T21833 arg1Of cocktail,protease
R17378 T21835 T21834 arg1Of cocktail,inhibitor
R17379 T21836 T21802 arg3Of ),(
R17380 T21839 T21837 arg2Of °C,at
R17381 T21839 T21838 arg1Of °C,4
R17382 T21839 T21840 arg1Of °C,for
R17383 T21842 T21840 arg2Of min,for
R17384 T21842 T21841 arg1Of min,10

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T21952 0-7 NNS denotes Pellets
T21953 8-12 VBD denotes were
T21954 13-22 VBN denotes incubated
T21955 23-25 IN denotes in
T21956 26-32 NNP denotes Buffer
T21957 33-34 NNP denotes C
T21958 35-36 -LRB- denotes (
T21959 36-38 CD denotes 20
T21960 39-41 NNP denotes mM
T21961 42-47 NNP denotes HEPES
T21962 48-51 NNP denotes pH7
T21963 51-53 CD denotes .9
T21964 53-54 , denotes ,
T21965 55-58 CD denotes 420
T21966 59-61 NNP denotes mM
T21967 62-66 NNP denotes NaCl
T21968 66-67 , denotes ,
T21969 68-71 CD denotes 1.5
T21970 72-74 NNP denotes mM
T21971 75-80 NNP denotes MgCl2
T21972 80-81 , denotes ,
T21973 82-84 CD denotes 25
T21974 84-85 NN denotes %
T21975 86-94 NN denotes glycerol
T21976 94-95 , denotes ,
T21977 96-99 CD denotes 0.5
T21978 100-102 NNP denotes mM
T21979 103-107 NNP denotes PMSF
T21980 107-108 , denotes ,
T21981 109-112 CD denotes 0.2
T21982 113-115 NNP denotes mM
T21983 116-120 NNP denotes EDTA
T21984 120-121 , denotes ,
T21985 122-125 CD denotes 0.5
T21986 126-128 NNP denotes mM
T21987 129-132 NNP denotes DTT
T21988 132-133 , denotes ,
T21989 134-142 JJ denotes complete
T21990 143-151 NN denotes protease
T21991 152-161 NN denotes inhibitor
T21992 162-170 NN denotes cocktail
T21993 170-171 -RRB- denotes )
T21994 172-174 IN denotes at
T21995 175-176 CD denotes 4
T21996 177-178 CD denotes °
T21997 178-179 NNP denotes C
T21998 180-183 IN denotes for
T21999 184-186 CD denotes 10
T22000 187-190 NN denotes min
T22001 190-191 . denotes .
R17493 T21952 T21954 nsubjpass Pellets,incubated
R17494 T21953 T21954 auxpass were,incubated
R17495 T21954 T21954 ROOT incubated,incubated
R17496 T21955 T21954 prep in,incubated
R17497 T21956 T21957 compound Buffer,C
R17498 T21957 T21955 pobj C,in
R17499 T21958 T21957 punct (,C
R17500 T21959 T21962 nummod 20,pH7
R17501 T21960 T21962 compound mM,pH7
R17502 T21961 T21962 compound HEPES,pH7
R17503 T21962 T21957 appos pH7,C
R17504 T21963 T21962 nummod .9,pH7
R17505 T21964 T21962 punct ",",pH7
R17506 T21965 T21967 nummod 420,NaCl
R17507 T21966 T21967 compound mM,NaCl
R17508 T21967 T21962 appos NaCl,pH7
R17509 T21968 T21967 punct ",",NaCl
R17510 T21969 T21971 nummod 1.5,MgCl2
R17511 T21970 T21971 compound mM,MgCl2
R17512 T21971 T21967 appos MgCl2,NaCl
R17513 T21972 T21971 punct ",",MgCl2
R17514 T21973 T21974 nummod 25,%
R17515 T21974 T21975 compound %,glycerol
R17516 T21975 T21971 appos glycerol,MgCl2
R17517 T21976 T21971 punct ",",MgCl2
R17518 T21977 T21979 nummod 0.5,PMSF
R17519 T21978 T21979 compound mM,PMSF
R17520 T21979 T21971 appos PMSF,MgCl2
R17521 T21980 T21979 punct ",",PMSF
R17522 T21981 T21983 nummod 0.2,EDTA
R17523 T21982 T21983 compound mM,EDTA
R17524 T21983 T21979 appos EDTA,PMSF
R17525 T21984 T21983 punct ",",EDTA
R17526 T21985 T21987 nummod 0.5,DTT
R17527 T21986 T21987 compound mM,DTT
R17528 T21987 T21983 appos DTT,EDTA
R17529 T21988 T21987 punct ",",DTT
R17530 T21989 T21992 amod complete,cocktail
R17531 T21990 T21992 compound protease,cocktail
R17532 T21991 T21992 compound inhibitor,cocktail
R17533 T21992 T21987 appos cocktail,DTT
R17534 T21993 T21987 punct ),DTT
R17535 T21994 T21979 prep at,PMSF
R17536 T21995 T21996 nummod 4,°
R17537 T21996 T21994 pobj °,at
R17538 T21997 T21979 conj C,PMSF
R17539 T21998 T21979 prep for,PMSF
R17540 T21999 T22000 nummod 10,min
R17541 T22000 T21998 pobj min,for
R17542 T22001 T21954 punct .,incubated

sentences

Id Subject Object Predicate Lexical cue
T21710 0-191 Sentence denotes Pellets were incubated in Buffer C (20 mM HEPES pH7.9, 420 mM NaCl, 1.5 mM MgCl2, 25% glycerol, 0.5 mM PMSF, 0.2 mM EDTA, 0.5 mM DTT, complete protease inhibitor cocktail) at 4 °C for 10 min.
T224 0-191 Sentence denotes Pellets were incubated in Buffer C (20 mM HEPES pH7.9, 420 mM NaCl, 1.5 mM MgCl2, 25% glycerol, 0.5 mM PMSF, 0.2 mM EDTA, 0.5 mM DTT, complete protease inhibitor cocktail) at 4 °C for 10 min.