PMC:3062687 / 233-398 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/3062687","sourcedb":"PMC","sourceid":"3062687","source_url":"http://www.ncbi.nlm.nih.gov/pmc/3062687","text":" that directs specific gene transcription. However, it is unknown how RPS3 nuclear translocation is regulated. Here we report that IKKβ phosphorylation of serine 209","tracks":[{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T242","span":{"begin":70,"end":74},"obj":"P23396"},{"id":"T243","span":{"begin":131,"end":135},"obj":"O14920"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T242","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T243","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]},{"project":"pmc-enju-pas","denotations":[{"id":"T134","span":{"begin":1,"end":5},"obj":"WDT"},{"id":"T135","span":{"begin":6,"end":13},"obj":"VB"},{"id":"T136","span":{"begin":14,"end":22},"obj":"JJ"},{"id":"T137","span":{"begin":23,"end":27},"obj":"NN"},{"id":"T138","span":{"begin":28,"end":41},"obj":"NN"},{"id":"T139","span":{"begin":43,"end":50},"obj":"RB"},{"id":"T140","span":{"begin":50,"end":51},"obj":"-COMMA-"},{"id":"T141","span":{"begin":52,"end":54},"obj":"PRP"},{"id":"T142","span":{"begin":55,"end":57},"obj":"VB"},{"id":"T143","span":{"begin":58,"end":65},"obj":"JJ"},{"id":"T144","span":{"begin":66,"end":69},"obj":"WRB"},{"id":"T145","span":{"begin":70,"end":74},"obj":"NN"},{"id":"T146","span":{"begin":75,"end":82},"obj":"JJ"},{"id":"T147","span":{"begin":83,"end":96},"obj":"NN"},{"id":"T148","span":{"begin":97,"end":99},"obj":"VB"},{"id":"T149","span":{"begin":100,"end":109},"obj":"VB"},{"id":"T150","span":{"begin":111,"end":115},"obj":"RB"},{"id":"T151","span":{"begin":116,"end":118},"obj":"PRP"},{"id":"T152","span":{"begin":119,"end":125},"obj":"VB"},{"id":"T153","span":{"begin":126,"end":130},"obj":"IN"},{"id":"T154","span":{"begin":131,"end":135},"obj":"NN"},{"id":"T155","span":{"begin":136,"end":151},"obj":"NN"},{"id":"T156","span":{"begin":152,"end":154},"obj":"IN"},{"id":"T157","span":{"begin":155,"end":161},"obj":"NN"},{"id":"T158","span":{"begin":162,"end":165},"obj":"CD"}],"relations":[{"id":"R112","pred":"arg2Of","subj":"T138","obj":"T135"},{"id":"R113","pred":"arg1Of","subj":"T138","obj":"T136"},{"id":"R114","pred":"arg1Of","subj":"T138","obj":"T137"},{"id":"R115","pred":"arg1Of","subj":"T142","obj":"T139"},{"id":"R116","pred":"arg1Of","subj":"T142","obj":"T140"},{"id":"R117","pred":"arg2Of","subj":"T143","obj":"T142"},{"id":"R118","pred":"arg1Of","subj":"T144","obj":"T141"},{"id":"R119","pred":"arg1Of","subj":"T144","obj":"T142"},{"id":"R120","pred":"arg1Of","subj":"T144","obj":"T143"},{"id":"R121","pred":"arg1Of","subj":"T147","obj":"T145"},{"id":"R122","pred":"arg1Of","subj":"T147","obj":"T146"},{"id":"R123","pred":"arg1Of","subj":"T147","obj":"T148"},{"id":"R124","pred":"arg2Of","subj":"T147","obj":"T149"},{"id":"R125","pred":"arg1Of","subj":"T149","obj":"T144"},{"id":"R126","pred":"arg2Of","subj":"T149","obj":"T148"},{"id":"R127","pred":"arg1Of","subj":"T151","obj":"T152"},{"id":"R128","pred":"arg1Of","subj":"T152","obj":"T150"},{"id":"R129","pred":"arg1Of","subj":"T155","obj":"T154"},{"id":"R130","pred":"arg1Of","subj":"T155","obj":"T156"},{"id":"R133","pred":"arg2Of","subj":"T157","obj":"T156"},{"id":"R134","pred":"arg1Of","subj":"T157","obj":"T158"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T134","pred":"source","obj":"pmc-enju-pas"},{"subj":"T135","pred":"source","obj":"pmc-enju-pas"},{"subj":"T136","pred":"source","obj":"pmc-enju-pas"},{"subj":"T137","pred":"source","obj":"pmc-enju-pas"},{"subj":"T138","pred":"source","obj":"pmc-enju-pas"},{"subj":"T139","pred":"source","obj":"pmc-enju-pas"},{"subj":"T140","pred":"source","obj":"pmc-enju-pas"},{"subj":"T141","pred":"source","obj":"pmc-enju-pas"},{"subj":"T142","pred":"source","obj":"pmc-enju-pas"},{"subj":"T143","pred":"source","obj":"pmc-enju-pas"},{"subj":"T144","pred":"source","obj":"pmc-enju-pas"},{"subj":"T145","pred":"source","obj":"pmc-enju-pas"},{"subj":"T146","pred":"source","obj":"pmc-enju-pas"},{"subj":"T147","pred":"source","obj":"pmc-enju-pas"},{"subj":"T148","pred":"source","obj":"pmc-enju-pas"},{"subj":"T149","pred":"source","obj":"pmc-enju-pas"},{"subj":"T150","pred":"source","obj":"pmc-enju-pas"},{"subj":"T151","pred":"source","obj":"pmc-enju-pas"},{"subj":"T152","pred":"source","obj":"pmc-enju-pas"},{"subj":"T153","pred":"source","obj":"pmc-enju-pas"},{"subj":"T154","pred":"source","obj":"pmc-enju-pas"},{"subj":"T155","pred":"source","obj":"pmc-enju-pas"},{"subj":"T156","pred":"source","obj":"pmc-enju-pas"},{"subj":"T157","pred":"source","obj":"pmc-enju-pas"},{"subj":"T158","pred":"source","obj":"pmc-enju-pas"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T284","span":{"begin":1,"end":5},"obj":"WDT"},{"id":"T285","span":{"begin":6,"end":13},"obj":"VBZ"},{"id":"T286","span":{"begin":14,"end":22},"obj":"JJ"},{"id":"T287","span":{"begin":23,"end":27},"obj":"NN"},{"id":"T288","span":{"begin":28,"end":41},"obj":"NN"},{"id":"T289","span":{"begin":41,"end":42},"obj":"."},{"id":"T290","span":{"begin":43,"end":50},"obj":"RB"},{"id":"T291","span":{"begin":50,"end":51},"obj":","},{"id":"T292","span":{"begin":52,"end":54},"obj":"PRP"},{"id":"T293","span":{"begin":55,"end":57},"obj":"VBZ"},{"id":"T294","span":{"begin":58,"end":65},"obj":"JJ"},{"id":"T295","span":{"begin":66,"end":69},"obj":"WRB"},{"id":"T296","span":{"begin":70,"end":74},"obj":"JJ"},{"id":"T297","span":{"begin":75,"end":82},"obj":"JJ"},{"id":"T298","span":{"begin":83,"end":96},"obj":"NN"},{"id":"T299","span":{"begin":97,"end":99},"obj":"VBZ"},{"id":"T300","span":{"begin":100,"end":109},"obj":"VBN"},{"id":"T301","span":{"begin":109,"end":110},"obj":"."},{"id":"T302","span":{"begin":111,"end":115},"obj":"RB"},{"id":"T303","span":{"begin":116,"end":118},"obj":"PRP"},{"id":"T304","span":{"begin":119,"end":125},"obj":"VBP"},{"id":"T305","span":{"begin":126,"end":130},"obj":"IN"},{"id":"T306","span":{"begin":131,"end":135},"obj":"NNP"},{"id":"T307","span":{"begin":136,"end":151},"obj":"NN"},{"id":"T308","span":{"begin":152,"end":154},"obj":"IN"},{"id":"T309","span":{"begin":155,"end":161},"obj":"NN"},{"id":"T310","span":{"begin":162,"end":165},"obj":"CD"}],"relations":[{"id":"R228","pred":"amod","subj":"T294","obj":"T298"},{"id":"R229","pred":"advmod","subj":"T295","obj":"T296"},{"id":"R230","pred":"amod","subj":"T296","obj":"T298"},{"id":"R231","pred":"amod","subj":"T297","obj":"T298"},{"id":"R232","pred":"nsubjpass","subj":"T298","obj":"T300"},{"id":"R233","pred":"auxpass","subj":"T299","obj":"T300"},{"id":"R234","pred":"ccomp","subj":"T300","obj":"T293"},{"id":"R235","pred":"punct","subj":"T301","obj":"T293"},{"id":"R236","pred":"advmod","subj":"T302","obj":"T304"},{"id":"R237","pred":"nsubj","subj":"T303","obj":"T304"},{"id":"R238","pred":"ROOT","subj":"T304","obj":"T304"},{"id":"R240","pred":"compound","subj":"T306","obj":"T307"},{"id":"R242","pred":"prep","subj":"T308","obj":"T307"},{"id":"R243","pred":"pobj","subj":"T309","obj":"T308"},{"id":"R244","pred":"nummod","subj":"T310","obj":"T309"},{"id":"R224","pred":"advmod","subj":"T290","obj":"T293"},{"id":"R225","pred":"punct","subj":"T291","obj":"T293"},{"id":"R226","pred":"nsubj","subj":"T292","obj":"T293"},{"id":"R227","pred":"ROOT","subj":"T293","obj":"T293"},{"id":"R218","pred":"nsubj","subj":"T284","obj":"T285"},{"id":"R220","pred":"amod","subj":"T286","obj":"T288"},{"id":"R221","pred":"compound","subj":"T287","obj":"T288"},{"id":"R222","pred":"dobj","subj":"T288","obj":"T285"}],"attributes":[{"subj":"T284","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T285","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T286","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T287","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T288","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T289","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T290","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T291","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T292","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T293","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T294","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T295","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T296","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T297","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T298","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T299","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T300","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T301","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T302","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T303","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T304","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T305","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T306","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T307","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T308","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T309","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T310","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"GO-BP","denotations":[{"id":"T433","span":{"begin":136,"end":151},"obj":"http://purl.obolibrary.org/obo/GO_0016310"},{"id":"T436","span":{"begin":28,"end":41},"obj":"http://purl.obolibrary.org/obo/GO_0006351"}],"attributes":[{"subj":"T433","pred":"source","obj":"GO-BP"},{"subj":"T436","pred":"source","obj":"GO-BP"}]},{"project":"sentences","denotations":[{"id":"T96","span":{"begin":43,"end":110},"obj":"Sentence"},{"id":"T4","span":{"begin":43,"end":110},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T96","pred":"source","obj":"sentences"},{"subj":"T4","pred":"source","obj":"sentences"}]},{"project":"events-check-again","denotations":[{"id":"T570","span":{"begin":70,"end":74},"obj":"Protein"},{"id":"T571","span":{"begin":75,"end":82},"obj":"Entity"},{"id":"T572","span":{"begin":83,"end":96},"obj":"Localization"},{"id":"T573","span":{"begin":100,"end":109},"obj":"Regulation"},{"id":"T574","span":{"begin":131,"end":135},"obj":"Protein"},{"id":"T575","span":{"begin":136,"end":151},"obj":"Phosphorylation"},{"id":"T576","span":{"begin":155,"end":165},"obj":"Entity"}],"relations":[{"id":"R445","pred":"themeOf","subj":"T570","obj":"T572"},{"id":"R446","pred":"locationOf","subj":"T571","obj":"T572"},{"id":"R447","pred":"themeOf","subj":"T572","obj":"T573"},{"id":"R449","pred":"themeOf","subj":"T576","obj":"T575"},{"id":"R450","pred":"partOf","subj":"T576","obj":"T574"}],"attributes":[{"id":"M7","pred":"Speculation","subj":"T573","obj":"true"},{"subj":"T570","pred":"source","obj":"events-check-again"},{"subj":"T571","pred":"source","obj":"events-check-again"},{"subj":"T572","pred":"source","obj":"events-check-again"},{"subj":"T573","pred":"source","obj":"events-check-again"},{"subj":"T574","pred":"source","obj":"events-check-again"},{"subj":"T575","pred":"source","obj":"events-check-again"},{"subj":"T576","pred":"source","obj":"events-check-again"}]},{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T510","span":{"begin":70,"end":74},"obj":"Protein"},{"id":"T511","span":{"begin":75,"end":82},"obj":"Entity"},{"id":"T512","span":{"begin":83,"end":96},"obj":"Localization"},{"id":"T513","span":{"begin":100,"end":109},"obj":"Regulation"},{"id":"T514","span":{"begin":131,"end":135},"obj":"Protein"},{"id":"T516","span":{"begin":136,"end":151},"obj":"Phosphorylation"}],"relations":[{"id":"R400","pred":"themeOf","subj":"T510","obj":"T512"},{"id":"R401","pred":"locationOf","subj":"T511","obj":"T512"},{"id":"R402","pred":"themeOf","subj":"T512","obj":"T513"},{"id":"R403","pred":"themeOf","subj":"T514","obj":"T516"}],"attributes":[{"subj":"T510","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T511","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T512","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T513","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T514","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T516","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"}]},{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T70","span":{"begin":70,"end":74},"obj":"Protein"},{"id":"T71","span":{"begin":75,"end":82},"obj":"Entity"},{"id":"T72","span":{"begin":83,"end":96},"obj":"Localization"},{"id":"T73","span":{"begin":100,"end":109},"obj":"Regulation"},{"id":"T74","span":{"begin":131,"end":135},"obj":"Protein"},{"id":"T75","span":{"begin":136,"end":151},"obj":"Phosphorylation"},{"id":"T76","span":{"begin":155,"end":165},"obj":"Entity"}],"relations":[{"id":"R57","pred":"themeOf","subj":"T70","obj":"T72"},{"id":"R58","pred":"locationOf","subj":"T71","obj":"T72"},{"id":"R59","pred":"themeOf","subj":"T72","obj":"T73"},{"id":"R61","pred":"themeOf","subj":"T76","obj":"T75"},{"id":"R62","pred":"partOf","subj":"T76","obj":"T74"}],"attributes":[{"id":"M3","pred":"Speculation","subj":"T73","obj":"true"},{"subj":"T70","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T71","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T72","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T73","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T74","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T75","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T76","pred":"source","obj":"bionlp-st-ge-2016-reference"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}]},{"project":"test2","denotations":[{"id":"T41","span":{"begin":70,"end":74},"obj":"Protein"},{"id":"T42","span":{"begin":75,"end":82},"obj":"Entity"},{"id":"T43","span":{"begin":83,"end":96},"obj":"Localization"},{"id":"T44","span":{"begin":100,"end":109},"obj":"Regulation"},{"id":"T45","span":{"begin":131,"end":135},"obj":"Protein"},{"id":"T46","span":{"begin":136,"end":151},"obj":"Phosphorylation"},{"id":"T47","span":{"begin":155,"end":165},"obj":"Entity"}],"relations":[{"id":"R34","pred":"themeOf","subj":"T41","obj":"T43"},{"id":"R35","pred":"locationOf","subj":"T42","obj":"T43"},{"id":"R36","pred":"themeOf","subj":"T43","obj":"T44"},{"id":"R38","pred":"themeOf","subj":"T47","obj":"T46"},{"id":"R39","pred":"partOf","subj":"T47","obj":"T45"}],"attributes":[{"subj":"T41","pred":"source","obj":"test2"},{"subj":"T42","pred":"source","obj":"test2"},{"subj":"T43","pred":"source","obj":"test2"},{"subj":"T44","pred":"source","obj":"test2"},{"subj":"T45","pred":"source","obj":"test2"},{"subj":"T46","pred":"source","obj":"test2"},{"subj":"T47","pred":"source","obj":"test2"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"bionlp-st-ge-2016-uniprot","color":"#93bbec","default":true},{"id":"pmc-enju-pas","color":"#d5ec93"},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#e993ec"},{"id":"GO-BP","color":"#93eccf"},{"id":"sentences","color":"#ecb593"},{"id":"events-check-again","color":"#9b93ec"},{"id":"bionlp-st-ge-2016-reference-tees","color":"#a5ec93"},{"id":"bionlp-st-ge-2016-reference","color":"#ec93bf"},{"id":"test2","color":"#93d9ec"}]}]}}