PMC:3062687 / 17293-17411 JSONTXT

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    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T12413","span":{"begin":9,"end":12},"obj":"P01375"},{"id":"T12414","span":{"begin":21,"end":25},"obj":"P23396"},{"id":"T12415","span":{"begin":92,"end":98},"obj":"P23396"},{"id":"T12416","span":{"begin":102,"end":107},"obj":"Q7DB71"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"However, TNF-induced RPS3 S209 phosphorylation was unimpaired in cells infected with either ΔnleH1 or ΔescN (Fig. 6d)."}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T12198","span":{"begin":0,"end":7},"obj":"RB"},{"id":"T12199","span":{"begin":7,"end":8},"obj":"-COMMA-"},{"id":"T12200","span":{"begin":9,"end":20},"obj":"JJ"},{"id":"T12201","span":{"begin":21,"end":25},"obj":"NN"},{"id":"T12202","span":{"begin":26,"end":30},"obj":"NN"},{"id":"T12203","span":{"begin":31,"end":46},"obj":"NN"},{"id":"T12204","span":{"begin":47,"end":50},"obj":"VB"},{"id":"T12205","span":{"begin":51,"end":61},"obj":"JJ"},{"id":"T12206","span":{"begin":62,"end":64},"obj":"IN"},{"id":"T12207","span":{"begin":65,"end":70},"obj":"NN"},{"id":"T12208","span":{"begin":71,"end":79},"obj":"VB"},{"id":"T12209","span":{"begin":80,"end":84},"obj":"IN"},{"id":"T12210","span":{"begin":85,"end":91},"obj":"CC"},{"id":"T12211","span":{"begin":92,"end":98},"obj":"NN"},{"id":"T12212","span":{"begin":99,"end":101},"obj":"CC"},{"id":"T12213","span":{"begin":102,"end":107},"obj":"NN"},{"id":"T12214","span":{"begin":108,"end":109},"obj":"-LRB-"},{"id":"T12215","span":{"begin":109,"end":113},"obj":"NNP"},{"id":"T12216","span":{"begin":114,"end":116},"obj":"CD"},{"id":"T12217","span":{"begin":116,"end":117},"obj":"-RRB-"}],"relations":[{"id":"R9827","pred":"arg1Of","subj":"T12203","obj":"T12200"},{"id":"R9828","pred":"arg1Of","subj":"T12203","obj":"T12201"},{"id":"R9829","pred":"arg1Of","subj":"T12203","obj":"T12202"},{"id":"R9830","pred":"arg1Of","subj":"T12203","obj":"T12204"},{"id":"R9831","pred":"arg1Of","subj":"T12203","obj":"T12205"},{"id":"R9832","pred":"arg1Of","subj":"T12204","obj":"T12198"},{"id":"R9833","pred":"arg1Of","subj":"T12204","obj":"T12199"},{"id":"R9834","pred":"arg1Of","subj":"T12204","obj":"T12206"},{"id":"R9835","pred":"arg2Of","subj":"T12205","obj":"T12204"},{"id":"R9836","pred":"arg2Of","subj":"T12207","obj":"T12206"},{"id":"R9837","pred":"arg2Of","subj":"T12207","obj":"T12208"},{"id":"R9838","pred":"arg1Of","subj":"T12208","obj":"T12209"},{"id":"R9839","pred":"arg1Of","subj":"T12208","obj":"T12214"},{"id":"R9840","pred":"arg1Of","subj":"T12211","obj":"T12212"},{"id":"R9841","pred":"arg2Of","subj":"T12212","obj":"T12209"},{"id":"R9842","pred":"arg1Of","subj":"T12212","obj":"T12210"},{"id":"R9843","pred":"arg2Of","subj":"T12213","obj":"T12212"},{"id":"R9844","pred":"arg2Of","subj":"T12215","obj":"T12214"},{"id":"R9845","pred":"arg1Of","subj":"T12215","obj":"T12216"},{"id":"R9846","pred":"arg3Of","subj":"T12217","obj":"T12214"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"However, TNF-induced RPS3 S209 phosphorylation was unimpaired in cells infected with either ΔnleH1 or ΔescN (Fig. 6d)."}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T12691","span":{"begin":0,"end":7},"obj":"RB"},{"id":"T12692","span":{"begin":7,"end":8},"obj":","},{"id":"T12693","span":{"begin":9,"end":20},"obj":"JJ"},{"id":"T12694","span":{"begin":21,"end":25},"obj":"NNP"},{"id":"T12695","span":{"begin":26,"end":30},"obj":"NNP"},{"id":"T12696","span":{"begin":31,"end":46},"obj":"NN"},{"id":"T12697","span":{"begin":47,"end":50},"obj":"VBD"},{"id":"T12698","span":{"begin":51,"end":61},"obj":"VBN"},{"id":"T12699","span":{"begin":62,"end":64},"obj":"IN"},{"id":"T12700","span":{"begin":65,"end":70},"obj":"NNS"},{"id":"T12701","span":{"begin":71,"end":79},"obj":"VBN"},{"id":"T12702","span":{"begin":80,"end":84},"obj":"IN"},{"id":"T12703","span":{"begin":85,"end":91},"obj":"DT"},{"id":"T12704","span":{"begin":92,"end":98},"obj":"NNP"},{"id":"T12705","span":{"begin":99,"end":101},"obj":"CC"},{"id":"T12706","span":{"begin":102,"end":107},"obj":"NNP"},{"id":"T12707","span":{"begin":108,"end":109},"obj":"-LRB-"},{"id":"T12708","span":{"begin":109,"end":113},"obj":"NNP"},{"id":"T12709","span":{"begin":114,"end":116},"obj":"CD"},{"id":"T12710","span":{"begin":116,"end":117},"obj":"-RRB-"},{"id":"T12711","span":{"begin":117,"end":118},"obj":"."}],"relations":[{"id":"R10268","pred":"advmod","subj":"T12691","obj":"T12698"},{"id":"R10269","pred":"punct","subj":"T12692","obj":"T12698"},{"id":"R10270","pred":"amod","subj":"T12693","obj":"T12696"},{"id":"R10271","pred":"compound","subj":"T12694","obj":"T12696"},{"id":"R10272","pred":"compound","subj":"T12695","obj":"T12696"},{"id":"R10273","pred":"nsubjpass","subj":"T12696","obj":"T12698"},{"id":"R10274","pred":"auxpass","subj":"T12697","obj":"T12698"},{"id":"R10275","pred":"ROOT","subj":"T12698","obj":"T12698"},{"id":"R10276","pred":"prep","subj":"T12699","obj":"T12698"},{"id":"R10277","pred":"pobj","subj":"T12700","obj":"T12699"},{"id":"R10278","pred":"acl","subj":"T12701","obj":"T12700"},{"id":"R10279","pred":"prep","subj":"T12702","obj":"T12701"},{"id":"R10280","pred":"det","subj":"T12703","obj":"T12704"},{"id":"R10281","pred":"pobj","subj":"T12704","obj":"T12702"},{"id":"R10282","pred":"cc","subj":"T12705","obj":"T12704"},{"id":"R10283","pred":"conj","subj":"T12706","obj":"T12704"},{"id":"R10284","pred":"punct","subj":"T12707","obj":"T12706"},{"id":"R10285","pred":"appos","subj":"T12708","obj":"T12706"},{"id":"R10286","pred":"nummod","subj":"T12709","obj":"T12708"},{"id":"R10287","pred":"punct","subj":"T12710","obj":"T12706"},{"id":"R10288","pred":"punct","subj":"T12711","obj":"T12698"}],"text":"However, TNF-induced RPS3 S209 phosphorylation was unimpaired in cells infected with either ΔnleH1 or ΔescN (Fig. 6d)."}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T13016","span":{"begin":31,"end":46},"obj":"http://purl.obolibrary.org/obo/GO_0016310"}],"text":"However, TNF-induced RPS3 S209 phosphorylation was unimpaired in cells infected with either ΔnleH1 or ΔescN (Fig. 6d)."}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T13033","span":{"begin":65,"end":70},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"However, TNF-induced RPS3 S209 phosphorylation was unimpaired in cells infected with either ΔnleH1 or ΔescN (Fig. 6d)."}

    sentences

    {"project":"sentences","denotations":[{"id":"T11948","span":{"begin":0,"end":118},"obj":"Sentence"},{"id":"T120","span":{"begin":0,"end":118},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"However, TNF-induced RPS3 S209 phosphorylation was unimpaired in cells infected with either ΔnleH1 or ΔescN (Fig. 6d)."}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T13516","span":{"begin":9,"end":12},"obj":"Protein"},{"id":"T13517","span":{"begin":13,"end":20},"obj":"Positive_regulation"},{"id":"T13518","span":{"begin":21,"end":25},"obj":"Protein"},{"id":"T13519","span":{"begin":26,"end":30},"obj":"Entity"},{"id":"T13520","span":{"begin":31,"end":46},"obj":"Phosphorylation"},{"id":"T13521","span":{"begin":51,"end":61},"obj":"Negative_regulation"},{"id":"T13522","span":{"begin":51,"end":61},"obj":"Negative_regulation"},{"id":"T13523","span":{"begin":92,"end":98},"obj":"Protein"},{"id":"T13524","span":{"begin":102,"end":107},"obj":"Protein"}],"relations":[{"id":"R10861","pred":"causeOf","subj":"T13516","obj":"T13517"},{"id":"R10862","pred":"themeOf","subj":"T13517","obj":"T13521"},{"id":"R10863","pred":"themeOf","subj":"T13517","obj":"T13522"},{"id":"R10864","pred":"themeOf","subj":"T13519","obj":"T13520"},{"id":"R10865","pred":"partOf","subj":"T13519","obj":"T13518"},{"id":"R10866","pred":"themeOf","subj":"T13520","obj":"T13517"},{"id":"R10867","pred":"causeOf","subj":"T13523","obj":"T13521"},{"id":"R10868","pred":"causeOf","subj":"T13524","obj":"T13522"}],"attributes":[{"id":"M461","pred":"Negation","subj":"T13521","obj":"true"},{"id":"M462","pred":"Negation","subj":"T13522","obj":"true"}],"text":"However, TNF-induced RPS3 S209 phosphorylation was unimpaired in cells infected with either ΔnleH1 or ΔescN (Fig. 6d)."}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T13096","span":{"begin":9,"end":12},"obj":"Protein"},{"id":"T13097","span":{"begin":21,"end":30},"obj":"Protein"},{"id":"T13098","span":{"begin":92,"end":107},"obj":"Protein"},{"id":"T13099","span":{"begin":109,"end":116},"obj":"Protein"},{"id":"T13100","span":{"begin":31,"end":46},"obj":"Phosphorylation"},{"id":"T13101","span":{"begin":13,"end":20},"obj":"Positive_regulation"},{"id":"T13102","span":{"begin":51,"end":61},"obj":"Negative_regulation"}],"relations":[{"id":"R10573","pred":"causeOf","subj":"T13096","obj":"T13101"},{"id":"R10574","pred":"themeOf","subj":"T13097","obj":"T13100"},{"id":"R10575","pred":"themeOf","subj":"T13100","obj":"T13101"},{"id":"R10576","pred":"themeOf","subj":"T13101","obj":"T13102"}],"text":"However, TNF-induced RPS3 S209 phosphorylation was unimpaired in cells infected with either ΔnleH1 or ΔescN (Fig. 6d)."}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T11888","span":{"begin":9,"end":12},"obj":"Protein"},{"id":"T11889","span":{"begin":13,"end":20},"obj":"Positive_regulation"},{"id":"T11890","span":{"begin":21,"end":25},"obj":"Protein"},{"id":"T11891","span":{"begin":26,"end":30},"obj":"Entity"},{"id":"T11892","span":{"begin":31,"end":46},"obj":"Phosphorylation"},{"id":"T11893","span":{"begin":51,"end":61},"obj":"Negative_regulation"},{"id":"T11894","span":{"begin":51,"end":61},"obj":"Negative_regulation"},{"id":"T11895","span":{"begin":92,"end":98},"obj":"Protein"},{"id":"T11896","span":{"begin":102,"end":107},"obj":"Protein"}],"relations":[{"id":"R9548","pred":"causeOf","subj":"T11888","obj":"T11889"},{"id":"R9549","pred":"themeOf","subj":"T11889","obj":"T11893"},{"id":"R9550","pred":"themeOf","subj":"T11889","obj":"T11894"},{"id":"R9551","pred":"themeOf","subj":"T11891","obj":"T11892"},{"id":"R9552","pred":"partOf","subj":"T11891","obj":"T11890"},{"id":"R9553","pred":"themeOf","subj":"T11892","obj":"T11889"},{"id":"R9554","pred":"causeOf","subj":"T11895","obj":"T11893"},{"id":"R9555","pred":"causeOf","subj":"T11896","obj":"T11894"}],"attributes":[{"id":"M449","pred":"Negation","subj":"T11893","obj":"true"},{"id":"M450","pred":"Negation","subj":"T11894","obj":"true"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"However, TNF-induced RPS3 S209 phosphorylation was unimpaired in cells infected with either ΔnleH1 or ΔescN (Fig. 6d)."}

    test2

    {"project":"test2","denotations":[{"id":"T11779","span":{"begin":9,"end":12},"obj":"Protein"},{"id":"T11780","span":{"begin":13,"end":20},"obj":"Positive_regulation"},{"id":"T11781","span":{"begin":21,"end":25},"obj":"Protein"},{"id":"T11782","span":{"begin":26,"end":30},"obj":"Entity"},{"id":"T11783","span":{"begin":31,"end":46},"obj":"Phosphorylation"},{"id":"T11784","span":{"begin":51,"end":61},"obj":"Negative_regulation"},{"id":"T11785","span":{"begin":92,"end":98},"obj":"Protein"},{"id":"T11786","span":{"begin":102,"end":107},"obj":"Protein"}],"relations":[{"id":"R9466","pred":"causeOf","subj":"T11779","obj":"T11780"},{"id":"R9467","pred":"themeOf","subj":"T11780","obj":"T11784"},{"id":"R9468","pred":"themeOf","subj":"T11782","obj":"T11783"},{"id":"R9469","pred":"partOf","subj":"T11782","obj":"T11781"},{"id":"R9470","pred":"themeOf","subj":"T11783","obj":"T11784"},{"id":"R9471","pred":"themeOf","subj":"T11783","obj":"T11780"},{"id":"R9472","pred":"causeOf","subj":"T11785","obj":"T11784"},{"id":"R9473","pred":"causeOf","subj":"T11786","obj":"T11784"}],"text":"However, TNF-induced RPS3 S209 phosphorylation was unimpaired in cells infected with either ΔnleH1 or ΔescN (Fig. 6d)."}