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PMC:3062687 / 15945-16103 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
21399639-20041225-74765168 149-150 20041225 denotes 9
21399639-20041225-74765168 149-150 20041225 denotes 9
21399639-20126447-74765169 152-154 20126447 denotes 33
21399639-20126447-74765169 152-154 20126447 denotes 33
21399639-20485572-74765169 152-154 20485572 denotes 33
21399639-20485572-74765169 152-154 20485572 denotes 33
21399639-21091507-74765169 152-154 21091507 denotes 33
21399639-21091507-74765169 152-154 21091507 denotes 33
21399639-21113130-74765169 152-154 21113130 denotes 33
21399639-21113130-74765169 152-154 21113130 denotes 33
21399639-20833837-74765169 152-154 20833837 denotes 33
21399639-20833837-74765169 152-154 20833837 denotes 33
21399639-21187904-74765169 152-154 21187904 denotes 33
21399639-21187904-74765169 152-154 21187904 denotes 33

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T11975 0-4 NN denotes EHEC
T11976 5-12 VB denotes utilize
T11977 13-17 NN denotes T3SS
T11978 18-20 TO denotes to
T11979 21-27 VB denotes inject
T11980 28-36 NN denotes effector
T11981 37-45 NN denotes proteins
T11982 46-54 RB denotes directly
T11983 55-59 IN denotes into
T11984 60-70 JJ denotes intestinal
T11985 71-81 JJ denotes epithelial
T11986 82-89 NN denotes cells32
T11987 89-90 -COMMA- denotes ,
T11988 91-92 DT denotes a
T11989 93-99 NN denotes subset
T11990 100-102 IN denotes of
T11991 103-108 WDT denotes which
T11992 109-116 VB denotes inhibit
T11993 117-132 JJ denotes NF-κB-dependent
T11994 133-139 JJ denotes innate
T11995 140-150 NN denotes responses9
T11996 150-151 -COMMA- denotes ,
T11997 152-157 CD denotes 33-38
R9600 T11975 T11976 arg1Of EHEC,utilize
R9601 T11977 T11976 arg2Of T3SS,utilize
R9602 T11977 T11978 modOf T3SS,to
R9603 T11979 T11978 arg1Of inject,to
R9604 T11979 T11982 arg1Of inject,directly
R9605 T11979 T11983 arg1Of inject,into
R9606 T11981 T11979 arg2Of proteins,inject
R9607 T11981 T11980 arg1Of proteins,effector
R9608 T11986 T11983 arg2Of cells32,into
R9609 T11986 T11984 arg1Of cells32,intestinal
R9610 T11986 T11985 arg1Of cells32,epithelial
R9611 T11986 T11990 arg2Of cells32,of
R9612 T11986 T11991 arg1Of cells32,which
R9613 T11989 T11988 arg1Of subset,a
R9614 T11989 T11990 arg1Of subset,of
R9615 T11989 T11992 arg1Of subset,inhibit
R9616 T11992 T11987 arg1Of inhibit,","
R9617 T11995 T11992 arg2Of responses9,inhibit
R9618 T11995 T11993 arg1Of responses9,NF-κB-dependent
R9619 T11995 T11994 arg1Of responses9,innate
R9620 T11995 T11996 arg1Of responses9,","
R9621 T11997 T11996 arg2Of 33-38,","

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T12458 0-4 NNP denotes EHEC
T12459 5-12 VB denotes utilize
T12460 13-17 CD denotes T3SS
T12461 18-20 TO denotes to
T12462 21-27 VB denotes inject
T12463 28-36 NN denotes effector
T12464 37-45 NNS denotes proteins
T12465 46-54 RB denotes directly
T12466 55-59 IN denotes into
T12467 60-70 JJ denotes intestinal
T12468 71-81 JJ denotes epithelial
T12469 82-89 NN denotes cells32
T12470 89-90 , denotes ,
T12471 91-92 DT denotes a
T12472 93-99 NN denotes subset
T12473 100-102 IN denotes of
T12474 103-108 WDT denotes which
T12475 109-116 VBP denotes inhibit
T12476 117-132 JJ denotes NF-κB-dependent
T12477 133-139 NN denotes innate
T12478 140-150 CD denotes responses9
T12479 150-151 , denotes ,
T12480 152-157 CD denotes 33-38
T12481 157-158 . denotes .
R10035 T12458 T12459 nsubj EHEC,utilize
R10036 T12459 T12459 ROOT utilize,utilize
R10037 T12460 T12459 dobj T3SS,utilize
R10038 T12461 T12462 aux to,inject
R10039 T12462 T12459 xcomp inject,utilize
R10040 T12463 T12464 compound effector,proteins
R10041 T12464 T12462 dobj proteins,inject
R10042 T12465 T12466 advmod directly,into
R10043 T12466 T12462 prep into,inject
R10044 T12467 T12469 amod intestinal,cells32
R10045 T12468 T12469 amod epithelial,cells32
R10046 T12469 T12466 pobj cells32,into
R10047 T12470 T12475 punct ",",inhibit
R10048 T12471 T12472 det a,subset
R10049 T12472 T12475 nsubj subset,inhibit
R10050 T12473 T12472 prep of,subset
R10051 T12474 T12473 pobj which,of
R10052 T12475 T12459 conj inhibit,utilize
R10053 T12476 T12477 advmod NF-κB-dependent,innate
R10054 T12477 T12480 amod innate,33-38
R10055 T12478 T12477 appos responses9,innate
R10056 T12479 T12477 punct ",",innate
R10057 T12480 T12475 dobj 33-38,inhibit
R10058 T12481 T12475 punct .,inhibit

UBERON-AE

Id Subject Object Predicate Lexical cue
T11828 60-70 http://purl.obolibrary.org/obo/UBERON_0000160 denotes intestinal
T11829 60-81 http://purl.obolibrary.org/obo/UBERON_0001277 denotes intestinal epithelial

GO-BP

Id Subject Object Predicate Lexical cue
T13021 109-122 http://purl.obolibrary.org/obo/GO_0032088 denotes inhibit NF-κB
T13022 109-122 http://purl.obolibrary.org/obo/GO_0007252 denotes inhibit NF-κB

sentences

Id Subject Object Predicate Lexical cue
T11939 0-158 Sentence denotes EHEC utilize T3SS to inject effector proteins directly into intestinal epithelial cells32, a subset of which inhibit NF-κB-dependent innate responses9, 33-38.
T111 0-158 Sentence denotes EHEC utilize T3SS to inject effector proteins directly into intestinal epithelial cells32, a subset of which inhibit NF-κB-dependent innate responses9, 33-38.

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T13040 117-122 Protein denotes NF-κB