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PMC:3062687 / 13909-14179 JSONTXT

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bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T9817 31-35 P23396 denotes RPS3
T9818 47-57 P08659 denotes luciferase
T9819 176-179 Q9U6Y4 denotes GFP
T9820 242-246 P23396 denotes RPS3

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T9481 0-8 RB denotes Moreover
T9482 8-9 -COMMA- denotes ,
T9483 10-13 DT denotes the
T9484 14-21 NN denotes failure
T9485 22-24 IN denotes of
T9486 25-30 NN denotes S209A
T9487 31-35 NN denotes RPS3
T9488 36-38 TO denotes to
T9489 39-46 VB denotes restore
T9490 47-57 NN denotes luciferase
T9491 58-66 NN denotes activity
T9492 67-70 VB denotes did
T9493 71-74 RB denotes not
T9494 75-81 VB denotes result
T9495 82-86 IN denotes from
T9496 87-96 JJ denotes defective
T9497 97-108 NN denotes translation
T9498 109-116 IN denotes because
T9499 117-120 DT denotes the
T9500 121-130 JJ denotes transient
T9501 131-145 NN denotes overexpression
T9502 146-148 IN denotes of
T9503 149-154 JJ denotes green
T9504 155-166 JJ denotes fluorescent
T9505 167-174 NN denotes protein
T9506 175-176 -LRB- denotes (
T9507 176-179 NN denotes GFP
T9508 179-180 -RRB- denotes )
T9509 181-184 VB denotes was
T9510 185-195 JJ denotes comparable
T9511 196-198 IN denotes in
T9512 199-204 NN denotes cells
T9513 205-217 VB denotes complemented
T9514 218-222 IN denotes with
T9515 223-232 JJ denotes wild-type
T9516 233-235 CC denotes or
T9517 236-241 NN denotes S029A
T9518 242-246 NN denotes RPS3
T9519 247-248 -LRB- denotes (
T9520 248-261 NNP denotes Supplementary
T9521 262-266 NNP denotes Fig.
T9522 267-268 CD denotes 8
T9523 268-269 -RRB- denotes )
R7598 T9484 T9483 arg1Of failure,the
R7599 T9484 T9485 arg1Of failure,of
R7600 T9484 T9488 modOf failure,to
R7601 T9484 T9492 arg1Of failure,did
R7602 T9484 T9494 arg1Of failure,result
R7603 T9487 T9485 arg2Of RPS3,of
R7604 T9487 T9486 arg1Of RPS3,S209A
R7605 T9489 T9488 arg1Of restore,to
R7606 T9491 T9489 arg2Of activity,restore
R7607 T9491 T9490 arg1Of activity,luciferase
R7608 T9494 T9481 arg1Of result,Moreover
R7609 T9494 T9482 arg1Of result,","
R7610 T9494 T9492 arg2Of result,did
R7611 T9494 T9493 arg1Of result,not
R7612 T9494 T9495 arg1Of result,from
R7613 T9494 T9498 arg1Of result,because
R7614 T9497 T9495 arg2Of translation,from
R7615 T9497 T9496 arg1Of translation,defective
R7616 T9501 T9499 arg1Of overexpression,the
R7617 T9501 T9500 arg1Of overexpression,transient
R7618 T9501 T9502 arg1Of overexpression,of
R7619 T9501 T9509 arg1Of overexpression,was
R7620 T9501 T9510 arg1Of overexpression,comparable
R7621 T9505 T9502 arg2Of protein,of
R7622 T9505 T9503 arg1Of protein,green
R7623 T9505 T9504 arg1Of protein,fluorescent
R7624 T9505 T9506 arg1Of protein,(
R7625 T9507 T9506 arg2Of GFP,(
R7626 T9508 T9506 arg3Of ),(
R7627 T9509 T9498 arg2Of was,because
R7628 T9509 T9511 arg1Of was,in
R7629 T9510 T9509 arg2Of comparable,was
R7630 T9512 T9511 arg2Of cells,in
R7631 T9512 T9513 arg2Of cells,complemented
R7632 T9513 T9514 arg1Of complemented,with
R7633 T9518 T9514 arg2Of RPS3,with
R7634 T9518 T9515 arg1Of RPS3,wild-type
R7635 T9518 T9516 arg1Of RPS3,or
R7636 T9518 T9517 arg1Of RPS3,S029A
R7637 T9518 T9519 arg1Of RPS3,(
R7638 T9521 T9519 arg2Of Fig.,(
R7639 T9521 T9520 arg1Of Fig.,Supplementary
R7640 T9521 T9522 arg1Of Fig.,8
R7641 T9523 T9519 arg3Of ),(

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T10174 0-8 RB denotes Moreover
T10175 8-9 , denotes ,
T10176 10-13 DT denotes the
T10177 14-21 NN denotes failure
T10178 22-24 IN denotes of
T10179 25-30 NNP denotes S209A
T10180 31-35 NNP denotes RPS3
T10181 36-38 TO denotes to
T10182 39-46 VB denotes restore
T10183 47-57 NN denotes luciferase
T10184 58-66 NN denotes activity
T10185 67-70 VBD denotes did
T10186 71-74 RB denotes not
T10187 75-81 VB denotes result
T10188 82-86 IN denotes from
T10189 87-96 JJ denotes defective
T10190 97-108 NN denotes translation
T10191 109-116 IN denotes because
T10192 117-120 DT denotes the
T10193 121-130 NN denotes transient
T10194 131-145 NN denotes overexpression
T10195 146-148 IN denotes of
T10196 149-154 JJ denotes green
T10197 155-166 JJ denotes fluorescent
T10198 167-174 NN denotes protein
T10199 175-176 -LRB- denotes (
T10200 176-179 NNP denotes GFP
T10201 179-180 -RRB- denotes )
T10202 181-184 VBD denotes was
T10203 185-195 JJ denotes comparable
T10204 196-198 IN denotes in
T10205 199-204 NNS denotes cells
T10206 205-217 VBN denotes complemented
T10207 218-222 IN denotes with
T10208 223-232 JJ denotes wild-type
T10209 233-235 CC denotes or
T10210 236-241 NNP denotes S029A
T10211 242-246 NNP denotes RPS3
T10212 247-248 -LRB- denotes (
T10213 248-261 NNP denotes Supplementary
T10214 262-266 NNP denotes Fig.
T10215 267-268 CD denotes 8
T10216 268-269 -RRB- denotes )
T10217 269-270 . denotes .
R8230 T10174 T10187 advmod Moreover,result
R8231 T10175 T10187 punct ",",result
R8232 T10176 T10177 det the,failure
R8233 T10177 T10187 nsubj failure,result
R8234 T10178 T10177 prep of,failure
R8235 T10179 T10180 compound S209A,RPS3
R8236 T10180 T10178 pobj RPS3,of
R8237 T10181 T10182 aux to,restore
R8238 T10182 T10177 acl restore,failure
R8239 T10183 T10184 compound luciferase,activity
R8240 T10184 T10182 dobj activity,restore
R8241 T10185 T10187 aux did,result
R8242 T10186 T10187 neg not,result
R8243 T10187 T10187 ROOT result,result
R8244 T10188 T10187 prep from,result
R8245 T10189 T10190 amod defective,translation
R8246 T10190 T10188 pobj translation,from
R8247 T10191 T10202 mark because,was
R8248 T10192 T10194 det the,overexpression
R8249 T10193 T10194 amod transient,overexpression
R8250 T10194 T10202 nsubj overexpression,was
R8251 T10195 T10194 prep of,overexpression
R8252 T10196 T10198 amod green,protein
R8253 T10197 T10198 amod fluorescent,protein
R8254 T10198 T10195 pobj protein,of
R8255 T10199 T10200 punct (,GFP
R8256 T10200 T10198 appos GFP,protein
R8257 T10201 T10198 punct ),protein
R8258 T10202 T10187 advcl was,result
R8259 T10203 T10202 acomp comparable,was
R8260 T10204 T10202 prep in,was
R8261 T10205 T10204 pobj cells,in
R8262 T10206 T10205 acl complemented,cells
R8263 T10207 T10206 prep with,complemented
R8264 T10208 T10207 pobj wild-type,with
R8265 T10209 T10208 cc or,wild-type
R8266 T10210 T10211 compound S029A,RPS3
R8267 T10211 T10208 conj RPS3,wild-type
R8268 T10212 T10214 punct (,Fig.
R8269 T10213 T10214 compound Supplementary,Fig.
R8270 T10214 T10211 appos Fig.,RPS3
R8271 T10215 T10214 nummod 8,Fig.
R8272 T10216 T10214 punct ),Fig.
R8273 T10217 T10187 punct .,result

GO-BP

Id Subject Object Predicate Lexical cue
T10683 47-66 http://purl.obolibrary.org/obo/GO_0045289 denotes luciferase activity
T10684 47-66 http://purl.obolibrary.org/obo/GO_0047077 denotes luciferase activity
T10685 47-66 http://purl.obolibrary.org/obo/GO_0047712 denotes luciferase activity
T10686 47-66 http://purl.obolibrary.org/obo/GO_0050248 denotes luciferase activity
T10687 47-66 http://purl.obolibrary.org/obo/GO_0050397 denotes luciferase activity
T10688 97-108 http://purl.obolibrary.org/obo/GO_0006412 denotes translation

GO-MF

Id Subject Object Predicate Lexical cue
T10694 47-66 http://purl.obolibrary.org/obo/GO_0045289 denotes luciferase activity
T10695 47-66 http://purl.obolibrary.org/obo/GO_0047077 denotes luciferase activity
T10696 47-66 http://purl.obolibrary.org/obo/GO_0047712 denotes luciferase activity
T10697 47-66 http://purl.obolibrary.org/obo/GO_0050248 denotes luciferase activity
T10698 47-66 http://purl.obolibrary.org/obo/GO_0050397 denotes luciferase activity

GO-CC

Id Subject Object Predicate Lexical cue
T10701 199-204 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T9167 0-270 Sentence denotes Moreover, the failure of S209A RPS3 to restore luciferase activity did not result from defective translation because the transient overexpression of green fluorescent protein (GFP) was comparable in cells complemented with wild-type or S029A RPS3 (Supplementary Fig. 8).
T98 0-270 Sentence denotes Moreover, the failure of S209A RPS3 to restore luciferase activity did not result from defective translation because the transient overexpression of green fluorescent protein (GFP) was comparable in cells complemented with wild-type or S029A RPS3 (Supplementary Fig. 8).

events-check-again

Id Subject Object Predicate Lexical cue
T11379 131-145 Gene_expression denotes overexpression
T11380 149-174 Protein denotes green fluorescent protein
T11381 176-179 Protein denotes GFP
T11382 242-246 Protein denotes RPS3
R9213 T11380 T11379 themeOf green fluorescent protein,overexpression
R9215 T11381 T11380 equivalentTo GFP,green fluorescent protein

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T11230 31-35 Protein denotes RPS3
T11231 47-57 Protein denotes luciferase
T11232 149-174 Protein denotes green fluorescent protein
T11233 176-179 Protein denotes GFP
T11234 242-246 Protein denotes RPS3
T11235 39-46 Negative_regulation denotes restore
T11236 131-145 Gene_expression denotes overexpression
T11237 131-145 Gene_expression denotes overexpression
T11238 131-145 Positive_regulation denotes overexpression
T11239 131-145 Positive_regulation denotes overexpression
T11240 205-217 Binding denotes complemented
T11241 75-81 Positive_regulation denotes result
T11242 75-81 Positive_regulation denotes result
R9072 T11230 T11235 causeOf RPS3,restore
R9074 T11231 T11235 themeOf luciferase,restore
R9078 T11232 T11236 themeOf green fluorescent protein,overexpression
R9079 T11233 T11237 themeOf GFP,overexpression
R9080 T11234 T11240 themeOf RPS3,complemented
R9081 T11236 T11238 themeOf overexpression,overexpression
R9083 T11236 T11241 themeOf overexpression,result
R9089 T11237 T11239 themeOf overexpression,overexpression
R9092 T11237 T11242 themeOf overexpression,result

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T9070 131-145 Gene_expression denotes overexpression
T9071 149-174 Protein denotes green fluorescent protein
T9072 176-179 Protein denotes GFP
T9073 242-246 Protein denotes RPS3
R7224 T9071 T9070 themeOf green fluorescent protein,overexpression
R7225 T9072 T9071 equivalentTo GFP,green fluorescent protein

test2

Id Subject Object Predicate Lexical cue
T8930 14-21 Negative_regulation denotes failure
T8931 39-46 Positive_regulation denotes restore
T8932 131-145 Positive_regulation denotes overexpression
T8933 149-174 Protein denotes green fluorescent protein
T8934 176-179 Protein denotes GFP
T8935 242-246 Protein denotes RPS3
R7119 T8933 T8932 themeOf green fluorescent protein,overexpression
R7120 T8934 T8933 equivalentTo GFP,green fluorescent protein