PMC:3062687 / 0-191
Annnotations
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T239 | 0-4 | O14920 | denotes | IKKβ |
| T240 | 31-35 | P23396 | denotes | RPS3 |
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T100 | 0-4 | NN | denotes | IKKβ |
| T101 | 5-20 | NN | denotes | phosphorylation |
| T102 | 21-30 | VB | denotes | regulates |
| T103 | 31-35 | NN | denotes | RPS3 |
| T104 | 36-43 | JJ | denotes | nuclear |
| T105 | 44-57 | NN | denotes | translocation |
| T106 | 58-61 | CC | denotes | and |
| T107 | 62-67 | NN | denotes | NF-κB |
| T108 | 68-76 | NN | denotes | function |
| T109 | 77-95 | NN | denotes | during Escherichia |
| T110 | 96-105 | NN | denotes | coli O157 |
| T111 | 105-106 | -COLON- | denotes | : |
| T112 | 106-108 | NN | denotes | H7 |
| T113 | 109-118 | NN | denotes | infection |
| T114 | 130-135 | NN | denotes | NF-κB |
| T115 | 136-138 | VB | denotes | is |
| T116 | 139-140 | DT | denotes | a |
| T117 | 141-146 | JJ | denotes | major |
| T118 | 147-151 | NN | denotes | gene |
| T119 | 152-161 | NN | denotes | regulator |
| T120 | 162-164 | IN | denotes | in |
| T121 | 165-171 | JJ | denotes | immune |
| T122 | 172-181 | NN | denotes | responses |
| T123 | 182-185 | CC | denotes | and |
| R78 | T100 | T102 | modOf | IKKβ,regulates |
| R79 | T100 | T111 | arg1Of | IKKβ,: |
| R80 | T101 | T102 | arg1Of | phosphorylation,regulates |
| R81 | T105 | T103 | arg1Of | translocation,RPS3 |
| R82 | T105 | T104 | arg1Of | translocation,nuclear |
| R83 | T105 | T106 | arg1Of | translocation,and |
| R84 | T106 | T102 | arg2Of | and,regulates |
| R85 | T110 | T106 | arg2Of | coli O157,and |
| R86 | T110 | T107 | arg1Of | coli O157,NF-κB |
| R87 | T110 | T108 | arg1Of | coli O157,function |
| R88 | T110 | T109 | arg1Of | coli O157,during Escherichia |
| R89 | T113 | T100 | arg1Of | infection,IKKβ |
| R90 | T113 | T112 | arg1Of | infection,H7 |
| R91 | T114 | T115 | arg1Of | NF-κB,is |
| R92 | T115 | T123 | arg1Of | is,and |
| R93 | T119 | T115 | arg2Of | regulator,is |
| R94 | T119 | T116 | arg1Of | regulator,a |
| R95 | T119 | T117 | arg1Of | regulator,major |
| R96 | T119 | T118 | arg1Of | regulator,gene |
| R97 | T119 | T120 | arg1Of | regulator,in |
| R98 | T122 | T120 | arg2Of | responses,in |
| R99 | T122 | T121 | arg1Of | responses,immune |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T250 | 0-4 | NNP | denotes | IKKβ |
| T251 | 5-20 | NN | denotes | phosphorylation |
| T252 | 21-30 | VBZ | denotes | regulates |
| T253 | 31-35 | CD | denotes | RPS3 |
| T254 | 36-43 | JJ | denotes | nuclear |
| T255 | 44-57 | NN | denotes | translocation |
| T256 | 58-61 | CC | denotes | and |
| T257 | 62-67 | JJ | denotes | NF-κB |
| T258 | 68-76 | NN | denotes | function |
| T259 | 77-95 | NNP | denotes | during Escherichia |
| T260 | 96-105 | NNP | denotes | coli O157 |
| T261 | 105-106 | : | denotes | : |
| T262 | 106-108 | NNP | denotes | H7 |
| T263 | 109-118 | NN | denotes | infection |
| T264 | 130-135 | NN | denotes | NF-κB |
| T265 | 136-138 | VBZ | denotes | is |
| T266 | 139-140 | DT | denotes | a |
| T267 | 141-146 | JJ | denotes | major |
| T268 | 147-151 | NN | denotes | gene |
| T269 | 152-161 | NN | denotes | regulator |
| T270 | 162-164 | IN | denotes | in |
| T271 | 165-171 | JJ | denotes | immune |
| T272 | 172-181 | NNS | denotes | responses |
| T273 | 182-185 | CC | denotes | and |
| R506 | T263 | T264 | compound | infection,NF-κB |
| R507 | T264 | T265 | nsubj | NF-κB,is |
| R508 | T265 | T265 | ROOT | is,is |
| R509 | T266 | T269 | det | a,regulator |
| R510 | T267 | T269 | amod | major,regulator |
| R511 | T268 | T269 | compound | gene,regulator |
| R512 | T269 | T265 | attr | regulator,is |
| R513 | T270 | T269 | prep | in,regulator |
| R514 | T271 | T272 | amod | immune,responses |
| R515 | T272 | T270 | pobj | responses,in |
| R516 | T273 | T272 | cc | and,responses |
| R493 | T250 | T251 | compound | IKKβ,phosphorylation |
| R494 | T251 | T252 | nsubj | phosphorylation,regulates |
| R495 | T252 | T252 | ROOT | regulates,regulates |
| R496 | T253 | T255 | nummod | RPS3,translocation |
| R497 | T254 | T255 | amod | nuclear,translocation |
| R498 | T255 | T258 | nmod | translocation,function |
| R499 | T256 | T255 | cc | and,translocation |
| R500 | T257 | T258 | compound | NF-κB,function |
| R501 | T258 | T252 | dobj | function,regulates |
| R502 | T259 | T260 | compound | during Escherichia,coli O157 |
| R503 | T260 | T252 | npadvmod | coli O157,regulates |
| R504 | T261 | T260 | punct | :,coli O157 |
| R505 | T262 | T264 | compound | H7,NF-κB |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T432 | 5-20 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
| T435 | 165-181 | http://purl.obolibrary.org/obo/GO_0006955 | denotes | immune responses |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T94 | 0-118 | Sentence | denotes | IKKβ phosphorylation regulates RPS3 nuclear translocation and NF-κB function during Escherichia coli O157:H7 infection |
| T1 | 0-118 | Sentence | denotes | IKKβ phosphorylation regulates RPS3 nuclear translocation and NF-κB function during Escherichia coli O157:H7 infection |
| T2 | 121-129 | Sentence | denotes | Abstract |
events-check-again
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T562 | 0-4 | Protein | denotes | IKKβ |
| T563 | 5-20 | Phosphorylation | denotes | phosphorylation |
| T564 | 21-30 | Regulation | denotes | regulates |
| T565 | 31-35 | Protein | denotes | RPS3 |
| T566 | 36-43 | Entity | denotes | nuclear |
| T567 | 44-57 | Localization | denotes | translocation |
| R439 | T562 | T563 | themeOf | IKKβ,phosphorylation |
| R440 | T563 | T564 | causeOf | phosphorylation,regulates |
| R441 | T565 | T567 | themeOf | RPS3,translocation |
| R442 | T566 | T567 | locationOf | nuclear,translocation |
| R443 | T567 | T564 | themeOf | translocation,regulates |
bionlp-st-ge-2016-reference-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T499 | 0-4 | Protein | denotes | IKKβ |
| T500 | 31-35 | Protein | denotes | RPS3 |
| T501 | 62-67 | Protein | denotes | NF-κB |
| T502 | 5-20 | Phosphorylation | denotes | phosphorylation |
| T503 | 36-43 | Entity | denotes | nuclear |
| T504 | 44-57 | Localization | denotes | translocation |
| T505 | 21-30 | Regulation | denotes | regulates |
| T506 | 130-135 | Protein | denotes | NF-κB |
| R395 | T499 | T502 | themeOf | IKKβ,phosphorylation |
| R396 | T500 | T504 | themeOf | RPS3,translocation |
| R397 | T502 | T505 | causeOf | phosphorylation,regulates |
| R398 | T503 | T504 | locationOf | nuclear,translocation |
| R399 | T504 | T505 | themeOf | translocation,regulates |
bionlp-st-ge-2016-reference
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T62 | 0-4 | Protein | denotes | IKKβ |
| T63 | 5-20 | Phosphorylation | denotes | phosphorylation |
| T64 | 21-30 | Regulation | denotes | regulates |
| T65 | 31-35 | Protein | denotes | RPS3 |
| T66 | 36-43 | Entity | denotes | nuclear |
| T67 | 44-57 | Localization | denotes | translocation |
| R51 | T62 | T63 | themeOf | IKKβ,phosphorylation |
| R52 | T63 | T64 | causeOf | phosphorylation,regulates |
| R53 | T65 | T67 | themeOf | RPS3,translocation |
| R54 | T66 | T67 | locationOf | nuclear,translocation |
| R55 | T67 | T64 | themeOf | translocation,regulates |
test2
| Id | Subject | Object | Predicate | Lexical cue | Speculation |
|---|---|---|---|---|---|
| T33 | 0-4 | Protein | denotes | IKKβ | |
| T34 | 5-20 | Phosphorylation | denotes | phosphorylation | |
| T35 | 21-30 | Regulation | denotes | regulates | |
| T36 | 31-35 | Protein | denotes | RPS3 | |
| T37 | 36-43 | Entity | denotes | nuclear | true |
| T38 | 44-57 | Localization | denotes | translocation | |
| R28 | T33 | T34 | themeOf | IKKβ,phosphorylation | |
| R29 | T34 | T35 | causeOf | phosphorylation,regulates | |
| R30 | T36 | T38 | themeOf | RPS3,translocation | |
| R31 | T37 | T38 | locationOf | nuclear,translocation | |
| R32 | T38 | T35 | themeOf | translocation,regulates |