PMC:2889865 / 7967-8086
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15425 | 10-15 | NN | denotes | NF-κB |
T15426 | 16-31 | NN | denotes | down-regulation |
T15427 | 32-34 | IN | denotes | by |
T15428 | 35-38 | NN | denotes | PMA |
T15429 | 39-42 | CC | denotes | and |
T15430 | 43-56 | NN | denotes | up-regulation |
T15431 | 57-59 | IN | denotes | by |
T15432 | 60-64 | NN | denotes | heat |
T15433 | 65-71 | VB | denotes | killed |
T15434 | 72-74 | FW | denotes | E. |
T15435 | 75-79 | FW | denotes | coli |
T15436 | 80-86 | NN | denotes | MG1655 |
T15437 | 87-96 | VB | denotes | following |
T15438 | 97-106 | JJ | denotes | long-term |
T15439 | 107-118 | NN | denotes | stimulation |
R12536 | T15426 | T15425 | arg1Of | down-regulation,NF-κB |
R12537 | T15426 | T15427 | arg1Of | down-regulation,by |
R12538 | T15426 | T15431 | arg1Of | down-regulation,by |
R12539 | T15426 | T15433 | arg1Of | down-regulation,killed |
R12540 | T15428 | T15429 | arg1Of | PMA,and |
R12541 | T15429 | T15427 | arg2Of | and,by |
R12542 | T15430 | T15429 | arg2Of | up-regulation,and |
R12543 | T15432 | T15431 | arg2Of | heat,by |
R12544 | T15433 | T15437 | arg1Of | killed,following |
R12545 | T15436 | T15433 | arg2Of | MG1655,killed |
R12546 | T15436 | T15434 | arg1Of | MG1655,E. |
R12547 | T15436 | T15435 | arg1Of | MG1655,coli |
R12548 | T15439 | T15437 | arg2Of | stimulation,following |
R12549 | T15439 | T15438 | arg1Of | stimulation,long-term |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15309 | 10-15 | JJ | denotes | NF-κB |
T15310 | 16-31 | NN | denotes | down-regulation |
T15311 | 32-34 | IN | denotes | by |
T15312 | 35-38 | NNP | denotes | PMA |
T15313 | 39-42 | CC | denotes | and |
T15314 | 43-56 | JJ | denotes | up-regulation |
T15315 | 57-59 | IN | denotes | by |
T15316 | 60-64 | NN | denotes | heat |
T15317 | 65-71 | VBD | denotes | killed |
T15318 | 72-74 | NNP | denotes | E. |
T15319 | 75-79 | NNS | denotes | coli |
T15320 | 80-86 | NNP | denotes | MG1655 |
T15321 | 87-96 | VBG | denotes | following |
T15322 | 97-106 | JJ | denotes | long-term |
T15323 | 107-118 | NN | denotes | stimulation |
T15324 | 118-119 | . | denotes | . |
R12420 | T15309 | T15310 | amod | NF-κB,down-regulation |
R12421 | T15310 | T15317 | nsubj | down-regulation,killed |
R12422 | T15311 | T15310 | prep | by,down-regulation |
R12423 | T15312 | T15311 | pobj | PMA,by |
R12424 | T15313 | T15312 | cc | and,PMA |
R12425 | T15314 | T15312 | conj | up-regulation,PMA |
R12426 | T15315 | T15314 | agent | by,up-regulation |
R12427 | T15316 | T15315 | pobj | heat,by |
R12428 | T15317 | T15317 | ROOT | killed,killed |
R12429 | T15318 | T15320 | compound | E.,MG1655 |
R12430 | T15319 | T15320 | compound | coli,MG1655 |
R12431 | T15320 | T15317 | dobj | MG1655,killed |
R12432 | T15321 | T15317 | prep | following,killed |
R12433 | T15322 | T15323 | amod | long-term,stimulation |
R12434 | T15323 | T15321 | pobj | stimulation,following |
R12435 | T15324 | T15317 | punct | .,killed |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15539 | 21-31 | http://purl.obolibrary.org/obo/GO_0065007 | denotes | regulation |
T15540 | 46-56 | http://purl.obolibrary.org/obo/GO_0065007 | denotes | regulation |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15303 | 10-119 | Sentence | denotes | NF-κB down-regulation by PMA and up-regulation by heat killed E. coli MG1655 following long-term stimulation. |
T55 | 0-119 | Sentence | denotes | Figure 2 NF-κB down-regulation by PMA and up-regulation by heat killed E. coli MG1655 following long-term stimulation. |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15562 | 10-15 | Protein | denotes | NF-κB |
T15563 | 16-31 | Negative_regulation | denotes | down-regulation |
T15564 | 43-56 | Positive_regulation | denotes | up-regulation |
T15565 | 16-31 | Negative_regulation | denotes | down-regulation |
R12642 | T15562 | T15563 | themeOf | NF-κB,down-regulation |
R12643 | T15563 | T15564 | themeOf | down-regulation,up-regulation |
R12644 | T15564 | T15565 | themeOf | up-regulation,down-regulation |