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PMC:2889865 / 773-960 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T666 6-10 FW denotes coli
T667 11-17 NN denotes MG1655
T668 18-26 VB denotes resulted
T669 27-29 IN denotes in
T670 30-31 DT denotes a
T671 32-46 JJ denotes dose-dependent
T672 47-55 NN denotes increase
T673 56-58 IN denotes in
T674 59-64 NN denotes NF-κB
T675 65-73 NN denotes activity
T676 74-81 IN denotes without
T677 82-91 VB denotes affecting
T678 92-96 NN denotes AP-1
T679 98-101 DT denotes The
T680 102-110 NN denotes cytokine
T681 111-118 NN denotes profile
T682 119-127 VB denotes revealed
T683 128-130 DT denotes an
T684 131-144 NN denotes up-regulation
T685 145-147 IN denotes of
T686 148-151 DT denotes the
T687 152-161 NN denotes chemokine
T688 162-167 NN denotes CXCL8
T689 168-171 CC denotes and
T690 172-175 DT denotes the
R552 T667 T666 arg1Of MG1655,coli
R554 T668 T669 arg1Of resulted,in
R555 T672 T669 arg2Of increase,in
R556 T672 T670 arg1Of increase,a
R557 T672 T671 arg1Of increase,dose-dependent
R558 T672 T673 arg1Of increase,in
R559 T675 T673 arg2Of activity,in
R560 T675 T674 arg1Of activity,NF-κB
R561 T677 T676 arg2Of affecting,without
R562 T678 T677 arg2Of AP-1,affecting
R563 T681 T679 arg1Of profile,The
R564 T681 T680 arg1Of profile,cytokine
R565 T681 T682 arg1Of profile,revealed
R569 T684 T683 arg1Of up-regulation,an
R570 T684 T685 arg1Of up-regulation,of
R571 T684 T689 arg1Of up-regulation,and
R572 T688 T685 arg2Of CXCL8,of
R573 T688 T686 arg1Of CXCL8,the
R574 T688 T687 arg1Of CXCL8,chemokine
R575 T689 T682 arg2Of and,revealed

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T268 4-5 . denotes .
T269 6-10 NNS denotes coli
T270 11-17 NNS denotes MG1655
T271 18-26 VBD denotes resulted
T272 27-29 IN denotes in
T273 30-31 DT denotes a
T274 32-46 JJ denotes dose-dependent
T275 47-55 NN denotes increase
T276 56-58 IN denotes in
T277 59-64 JJ denotes NF-κB
T278 65-73 NN denotes activity
T279 74-81 IN denotes without
T280 82-91 VBG denotes affecting
T281 92-96 NN denotes AP-1
T282 96-97 . denotes .
T283 98-101 DT denotes The
T284 102-110 NN denotes cytokine
T285 111-118 NN denotes profile
T286 119-127 VBD denotes revealed
T287 128-130 DT denotes an
T288 131-144 NN denotes up-regulation
T289 145-147 IN denotes of
T290 148-151 DT denotes the
T291 152-161 NN denotes chemokine
T292 162-167 NNP denotes CXCL8
T293 168-171 CC denotes and
T294 172-175 DT denotes the
R159 T269 T270 compound coli,MG1655
R160 T270 T271 nsubj MG1655,resulted
R161 T271 T271 ROOT resulted,resulted
R162 T272 T271 prep in,resulted
R163 T273 T275 det a,increase
R164 T274 T275 amod dose-dependent,increase
R165 T275 T272 pobj increase,in
R166 T276 T275 prep in,increase
R167 T277 T278 amod NF-κB,activity
R168 T278 T276 pobj activity,in
R169 T279 T271 prep without,resulted
R170 T280 T279 pcomp affecting,without
R171 T281 T280 dobj AP-1,affecting
R172 T282 T271 punct .,resulted
R173 T283 T285 det The,profile
R174 T284 T285 compound cytokine,profile
R175 T285 T286 nsubj profile,revealed
R176 T286 T286 ROOT revealed,revealed
R177 T287 T288 det an,up-regulation
R178 T288 T286 dobj up-regulation,revealed
R179 T289 T288 prep of,up-regulation
R180 T290 T292 det the,CXCL8
R181 T291 T292 compound chemokine,CXCL8
R182 T292 T289 pobj CXCL8,of
R183 T293 T292 cc and,CXCL8

GO-BP

Id Subject Object Predicate Lexical cue
T973 134-144 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T987 131-161 http://purl.obolibrary.org/obo/GO_0032722 denotes up-regulation of the chemokine

events-check-again

Id Subject Object Predicate Lexical cue
T1220 131-144 Positive_regulation denotes up-regulation
T1221 131-144 Positive_regulation denotes up-regulation
T1222 131-144 Positive_regulation denotes up-regulation
T1223 162-167 Protein denotes CXCL8
R881 T1223 T1222 themeOf CXCL8,up-regulation

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T1269 59-64 Protein denotes NF-κB
T1270 92-96 Protein denotes AP-1
T1273 47-55 Positive_regulation denotes increase
T1274 82-91 Regulation denotes affecting
T1278 162-167 Protein denotes CXCL8
T1281 131-144 Positive_regulation denotes up-regulation
T1282 131-144 Positive_regulation denotes up-regulation
T1283 131-144 Positive_regulation denotes up-regulation
R905 T1269 T1273 themeOf NF-κB,increase
R906 T1270 T1274 themeOf AP-1,affecting
R910 T1278 T1281 themeOf CXCL8,up-regulation

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T87 131-144 Positive_regulation denotes up-regulation
T88 131-144 Positive_regulation denotes up-regulation
T89 131-144 Positive_regulation denotes up-regulation
T90 162-167 Protein denotes CXCL8
R49 T90 T89 themeOf CXCL8,up-regulation

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T933 92-96 P05412 denotes AP-1
T934 162-167 P10145 denotes CXCL8

test2

Id Subject Object Predicate Lexical cue Negation
T48 131-144 Positive_regulation denotes up-regulation true
T49 162-167 Protein denotes CXCL8
R26 T49 T48 themeOf CXCL8,up-regulation