PMC:2889865 / 751-926
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T661 | 3-9 | VB | denotes | killed |
T662 | 10-11 | -LRB- | denotes | ( |
T663 | 11-13 | NN | denotes | HK |
T664 | 13-14 | -RRB- | denotes | ) |
T665 | 15-27 | FW | denotes | Escherichia. |
T666 | 28-32 | FW | denotes | coli |
T667 | 33-39 | NN | denotes | MG1655 |
T668 | 40-48 | VB | denotes | resulted |
T669 | 49-51 | IN | denotes | in |
T670 | 52-53 | DT | denotes | a |
T671 | 54-68 | JJ | denotes | dose-dependent |
T672 | 69-77 | NN | denotes | increase |
T673 | 78-80 | IN | denotes | in |
T674 | 81-86 | NN | denotes | NF-κB |
T675 | 87-95 | NN | denotes | activity |
T676 | 96-103 | IN | denotes | without |
T677 | 104-113 | VB | denotes | affecting |
T678 | 114-118 | NN | denotes | AP-1 |
T679 | 120-123 | DT | denotes | The |
T680 | 124-132 | NN | denotes | cytokine |
T681 | 133-140 | NN | denotes | profile |
T682 | 141-149 | VB | denotes | revealed |
T683 | 150-152 | DT | denotes | an |
T684 | 153-166 | NN | denotes | up-regulation |
T685 | 167-169 | IN | denotes | of |
T686 | 170-173 | DT | denotes | the |
R546 | T661 | T662 | arg1Of | killed,( |
R547 | T663 | T662 | arg2Of | HK,( |
R548 | T664 | T662 | arg3Of | ),( |
R551 | T667 | T665 | arg1Of | MG1655,Escherichia. |
R552 | T667 | T666 | arg1Of | MG1655,coli |
R554 | T668 | T669 | arg1Of | resulted,in |
R555 | T672 | T669 | arg2Of | increase,in |
R556 | T672 | T670 | arg1Of | increase,a |
R557 | T672 | T671 | arg1Of | increase,dose-dependent |
R558 | T672 | T673 | arg1Of | increase,in |
R559 | T675 | T673 | arg2Of | activity,in |
R560 | T675 | T674 | arg1Of | activity,NF-κB |
R561 | T677 | T676 | arg2Of | affecting,without |
R562 | T678 | T677 | arg2Of | AP-1,affecting |
R563 | T681 | T679 | arg1Of | profile,The |
R564 | T681 | T680 | arg1Of | profile,cytokine |
R565 | T681 | T682 | arg1Of | profile,revealed |
R569 | T684 | T683 | arg1Of | up-regulation,an |
R570 | T684 | T685 | arg1Of | up-regulation,of |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T263 | 3-9 | VBN | denotes | killed |
T264 | 10-11 | -LRB- | denotes | ( |
T265 | 11-13 | NNP | denotes | HK |
T266 | 13-14 | -RRB- | denotes | ) |
T267 | 15-26 | NNP | denotes | Escherichia |
T268 | 26-27 | . | denotes | . |
T269 | 28-32 | NNS | denotes | coli |
T270 | 33-39 | NNS | denotes | MG1655 |
T271 | 40-48 | VBD | denotes | resulted |
T272 | 49-51 | IN | denotes | in |
T273 | 52-53 | DT | denotes | a |
T274 | 54-68 | JJ | denotes | dose-dependent |
T275 | 69-77 | NN | denotes | increase |
T276 | 78-80 | IN | denotes | in |
T277 | 81-86 | JJ | denotes | NF-κB |
T278 | 87-95 | NN | denotes | activity |
T279 | 96-103 | IN | denotes | without |
T280 | 104-113 | VBG | denotes | affecting |
T281 | 114-118 | NN | denotes | AP-1 |
T282 | 118-119 | . | denotes | . |
T283 | 120-123 | DT | denotes | The |
T284 | 124-132 | NN | denotes | cytokine |
T285 | 133-140 | NN | denotes | profile |
T286 | 141-149 | VBD | denotes | revealed |
T287 | 150-152 | DT | denotes | an |
T288 | 153-166 | NN | denotes | up-regulation |
T289 | 167-169 | IN | denotes | of |
T290 | 170-173 | DT | denotes | the |
R154 | T264 | T263 | punct | (,killed |
R155 | T265 | T263 | npadvmod | HK,killed |
R156 | T266 | T267 | punct | ),Escherichia |
R159 | T269 | T270 | compound | coli,MG1655 |
R160 | T270 | T271 | nsubj | MG1655,resulted |
R161 | T271 | T271 | ROOT | resulted,resulted |
R162 | T272 | T271 | prep | in,resulted |
R163 | T273 | T275 | det | a,increase |
R164 | T274 | T275 | amod | dose-dependent,increase |
R165 | T275 | T272 | pobj | increase,in |
R166 | T276 | T275 | prep | in,increase |
R167 | T277 | T278 | amod | NF-κB,activity |
R168 | T278 | T276 | pobj | activity,in |
R169 | T279 | T271 | prep | without,resulted |
R170 | T280 | T279 | pcomp | affecting,without |
R171 | T281 | T280 | dobj | AP-1,affecting |
R172 | T282 | T271 | punct | .,resulted |
R173 | T283 | T285 | det | The,profile |
R174 | T284 | T285 | compound | cytokine,profile |
R175 | T285 | T286 | nsubj | profile,revealed |
R176 | T286 | T286 | ROOT | revealed,revealed |
R177 | T287 | T288 | det | an,up-regulation |
R178 | T288 | T286 | dobj | up-regulation,revealed |
R179 | T289 | T288 | prep | of,up-regulation |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T973 | 156-166 | http://purl.obolibrary.org/obo/GO_0065007 | denotes | regulation |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1220 | 153-166 | Positive_regulation | denotes | up-regulation |
T1221 | 153-166 | Positive_regulation | denotes | up-regulation |
T1222 | 153-166 | Positive_regulation | denotes | up-regulation |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1269 | 81-86 | Protein | denotes | NF-κB |
T1270 | 114-118 | Protein | denotes | AP-1 |
T1273 | 69-77 | Positive_regulation | denotes | increase |
T1274 | 104-113 | Regulation | denotes | affecting |
T1281 | 153-166 | Positive_regulation | denotes | up-regulation |
T1282 | 153-166 | Positive_regulation | denotes | up-regulation |
T1283 | 153-166 | Positive_regulation | denotes | up-regulation |
R905 | T1269 | T1273 | themeOf | NF-κB,increase |
R906 | T1270 | T1274 | themeOf | AP-1,affecting |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T87 | 153-166 | Positive_regulation | denotes | up-regulation |
T88 | 153-166 | Positive_regulation | denotes | up-regulation |
T89 | 153-166 | Positive_regulation | denotes | up-regulation |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T933 | 114-118 | P05412 | denotes | AP-1 |
test2
Id | Subject | Object | Predicate | Lexical cue | Negation |
---|---|---|---|---|---|
T48 | 153-166 | Positive_regulation | denotes | up-regulation | true |