PMC:2889865 / 659-772
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T645 | 2-4 | IN | denotes | in |
| T646 | 5-7 | DT | denotes | an |
| T647 | 8-21 | NN | denotes | up-regulation |
| T648 | 22-24 | IN | denotes | of |
| T649 | 25-29 | NN | denotes | AP-1 |
| T650 | 30-33 | CC | denotes | and |
| T651 | 34-49 | NN | denotes | down-regulation |
| T652 | 50-52 | IN | denotes | of |
| T653 | 53-58 | NN | denotes | NF-κB |
| T654 | 59-67 | NN | denotes | activity |
| T655 | 67-68 | -COMMA- | denotes | , |
| T656 | 69-76 | RB | denotes | however |
| T657 | 76-77 | -COMMA- | denotes | , |
| T658 | 78-86 | NN | denotes | exposure |
| T659 | 87-89 | TO | denotes | to |
| T660 | 90-94 | NN | denotes | heat |
| T661 | 95-101 | VB | denotes | killed |
| T662 | 102-103 | -LRB- | denotes | ( |
| T663 | 103-105 | NN | denotes | HK |
| T664 | 105-106 | -RRB- | denotes | ) |
| T3418 | 11-21 | NN | denotes | regulation |
| T3419 | 22-24 | IN | denotes | of |
| T3420 | 25-29 | NN | denotes | AP-1 |
| T3421 | 30-33 | CC | denotes | and |
| R533 | T647 | T645 | arg2Of | up-regulation,in |
| R534 | T647 | T646 | arg1Of | up-regulation,an |
| R535 | T647 | T648 | arg1Of | up-regulation,of |
| R536 | T649 | T650 | arg1Of | AP-1,and |
| R537 | T650 | T648 | arg2Of | and,of |
| R538 | T650 | T652 | arg1Of | and,of |
| R539 | T651 | T650 | arg2Of | down-regulation,and |
| R540 | T654 | T652 | arg2Of | activity,of |
| R541 | T654 | T653 | arg1Of | activity,NF-κB |
| R543 | T658 | T659 | arg1Of | exposure,to |
| R545 | T660 | T661 | arg2Of | heat,killed |
| R546 | T661 | T662 | arg1Of | killed,( |
| R547 | T663 | T662 | arg2Of | HK,( |
| R548 | T664 | T662 | arg3Of | ),( |
| R2763 | T3418 | T3419 | arg1Of | regulation,of |
| R2764 | T3420 | T3421 | arg1Of | AP-1,and |
| R2765 | T3421 | T3419 | arg2Of | and,of |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T247 | 2-4 | IN | denotes | in |
| T248 | 5-7 | DT | denotes | an |
| T249 | 8-21 | NN | denotes | up-regulation |
| T250 | 22-24 | IN | denotes | of |
| T251 | 25-29 | NN | denotes | AP-1 |
| T252 | 30-33 | CC | denotes | and |
| T253 | 34-49 | NN | denotes | down-regulation |
| T254 | 50-52 | IN | denotes | of |
| T255 | 53-58 | JJ | denotes | NF-κB |
| T256 | 59-67 | NN | denotes | activity |
| T257 | 67-68 | , | denotes | , |
| T258 | 69-76 | RB | denotes | however |
| T259 | 76-77 | , | denotes | , |
| T260 | 78-86 | NN | denotes | exposure |
| T261 | 87-89 | TO | denotes | to |
| T262 | 90-94 | VB | denotes | heat |
| T263 | 95-101 | VBN | denotes | killed |
| T264 | 102-103 | -LRB- | denotes | ( |
| T265 | 103-105 | NNP | denotes | HK |
| T266 | 105-106 | -RRB- | denotes | ) |
| T3064 | 11-21 | NN | denotes | regulation |
| T3065 | 22-24 | IN | denotes | of |
| T3066 | 25-29 | NNP | denotes | AP-1 |
| T3067 | 30-33 | CC | denotes | and |
| R138 | T248 | T249 | det | an,up-regulation |
| R139 | T249 | T247 | pobj | up-regulation,in |
| R140 | T250 | T249 | prep | of,up-regulation |
| R141 | T251 | T250 | pobj | AP-1,of |
| R142 | T252 | T251 | cc | and,AP-1 |
| R143 | T253 | T251 | conj | down-regulation,AP-1 |
| R144 | T254 | T251 | prep | of,AP-1 |
| R145 | T255 | T256 | amod | NF-κB,activity |
| R146 | T256 | T254 | pobj | activity,of |
| R148 | T258 | T259 | preconj | however,"," |
| R152 | T262 | T261 | pobj | heat,to |
| R153 | T263 | T262 | dep | killed,heat |
| R154 | T264 | T263 | punct | (,killed |
| R155 | T265 | T263 | npadvmod | HK,killed |
| R2410 | T3065 | T3064 | prep | of,regulation |
| R2411 | T3066 | T3065 | pobj | AP-1,of |
| R2412 | T3067 | T3066 | cc | and,AP-1 |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T971 | 11-21 | http://purl.obolibrary.org/obo/GO_0065007 | denotes | regulation |
| T972 | 39-49 | http://purl.obolibrary.org/obo/GO_0065007 | denotes | regulation |
| T3781 | 11-21 | http://purl.obolibrary.org/obo/GO_0065007 | denotes | regulation |
bionlp-st-ge-2016-reference-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1267 | 25-29 | Protein | denotes | AP-1 |
| T1268 | 53-58 | Protein | denotes | NF-κB |
| T1271 | 8-21 | Positive_regulation | denotes | up-regulation |
| T1272 | 34-49 | Negative_regulation | denotes | down-regulation |
| T1277 | 8-21 | Positive_regulation | denotes | up-regulation |
| T3812 | 25-29 | Protein | denotes | AP-1 |
| T3816 | 11-21 | Regulation | denotes | regulation |
| T3817 | 11-21 | Regulation | denotes | regulation |
| R903 | T1267 | T1271 | themeOf | AP-1,up-regulation |
| R904 | T1268 | T1272 | themeOf | NF-κB,down-regulation |
| R909 | T1272 | T1277 | themeOf | down-regulation,up-regulation |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T932 | 25-29 | P05412 | denotes | AP-1 |
| T3757 | 25-29 | P05412 | denotes | AP-1 |