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PMC:2889865 / 19157-19287 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T8922 0-3 NN denotes TNF
T8923 4-6 VB denotes is
T8924 7-10 CD denotes one
T8925 11-13 IN denotes of
T8926 14-17 DT denotes the
T8927 18-23 JJ denotes first
T8928 24-33 NN denotes cytokines
T8929 34-41 VB denotes induced
T8930 42-44 IN denotes by
T8931 45-52 NN denotes T-cells
T8932 53-54 -LRB- denotes [
T8933 54-56 CD denotes 42
T8934 56-57 -RRB- denotes ]
T8935 58-61 CC denotes and
T8936 62-65 PRP-DOLLAR- denotes its
T8937 66-76 NN denotes expression
T8938 77-79 VB denotes is
T8939 80-89 VB denotes regulated
T8940 90-92 IN denotes by
T8941 93-104 NN denotes calcineurin
T8942 104-105 -COMMA- denotes ,
T8943 106-110 NN denotes NFAT
T8944 111-114 CC denotes and
T8945 115-124 NN denotes ATF-2/Jun
T8946 125-126 -LRB- denotes [
T8947 126-128 CD denotes 20
T8948 128-129 -RRB- denotes ]
R7401 T8922 T8923 arg1Of TNF,is
R7402 T8923 T8935 arg1Of is,and
R7403 T8924 T8923 arg2Of one,is
R7404 T8924 T8925 arg1Of one,of
R7407 T8928 T8925 arg2Of cytokines,of
R7408 T8928 T8926 arg1Of cytokines,the
R7409 T8928 T8927 arg1Of cytokines,first
R7410 T8928 T8929 arg2Of cytokines,induced
R7412 T8931 T8929 arg1Of T-cells,induced
R7413 T8931 T8930 arg2Of T-cells,by
R7414 T8931 T8932 arg1Of T-cells,[
R7415 T8933 T8932 arg2Of 42,[
R7416 T8934 T8932 arg3Of ],[
R7418 T8937 T8936 arg1Of expression,its
R7419 T8937 T8938 arg1Of expression,is
R7420 T8937 T8939 arg2Of expression,regulated
R7422 T8939 T8935 arg2Of regulated,and
R7423 T8939 T8938 arg2Of regulated,is
R7426 T8939 T8946 arg1Of regulated,[
R7428 T8941 T8942 arg1Of calcineurin,","
R7429 T8942 T8944 arg1Of ",",and
R7430 T8943 T8942 arg2Of NFAT,","
R7431 T8944 T8939 arg1Of and,regulated
R7432 T8944 T8940 arg2Of and,by
R7433 T8945 T8944 arg2Of ATF-2/Jun,and
R7434 T8947 T8946 arg2Of 20,[
R7435 T8948 T8946 arg3Of ],[

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T7408 0-3 NNP denotes TNF
T7409 4-6 VBZ denotes is
T7410 7-10 CD denotes one
T7411 11-13 IN denotes of
T7412 14-17 DT denotes the
T7413 18-23 JJ denotes first
T7414 24-33 NNS denotes cytokines
T7415 34-41 VBN denotes induced
T7416 42-44 IN denotes by
T7417 45-52 NNS denotes T-cells
T7418 53-54 NNP denotes [
T7419 54-56 CD denotes 42
T7420 56-57 NNP denotes ]
T7421 58-61 CC denotes and
T7422 62-65 PRP$ denotes its
T7423 66-76 NN denotes expression
T7424 77-79 VBZ denotes is
T7425 80-89 VBN denotes regulated
T7426 90-92 IN denotes by
T7427 93-104 NN denotes calcineurin
T7428 104-105 , denotes ,
T7429 106-110 NNP denotes NFAT
T7430 111-114 CC denotes and
T7431 115-120 NNP denotes ATF-2
T7432 120-121 NNP denotes /
T7433 121-124 NNP denotes Jun
T7434 125-126 NNP denotes [
T7435 126-128 CD denotes 20
T7436 128-129 NNP denotes ]
T7437 129-130 . denotes .
R5900 T7408 T7409 nsubj TNF,is
R5901 T7409 T7409 ROOT is,is
R5902 T7410 T7409 attr one,is
R5903 T7411 T7410 prep of,one
R5904 T7412 T7414 det the,cytokines
R5905 T7413 T7414 amod first,cytokines
R5906 T7414 T7411 pobj cytokines,of
R5907 T7415 T7414 acl induced,cytokines
R5908 T7416 T7415 agent by,induced
R5909 T7417 T7416 pobj T-cells,by
R5910 T7418 T7420 nmod [,]
R5911 T7419 T7420 nummod 42,]
R5912 T7420 T7417 appos ],T-cells
R5913 T7421 T7420 cc and,]
R5914 T7422 T7423 poss its,expression
R5915 T7423 T7425 nsubjpass expression,regulated
R5916 T7424 T7425 auxpass is,regulated
R5917 T7425 T7410 relcl regulated,one
R5918 T7426 T7425 agent by,regulated
R5919 T7427 T7426 pobj calcineurin,by
R5920 T7428 T7427 punct ",",calcineurin
R5921 T7429 T7436 nmod NFAT,]
R5922 T7430 T7429 cc and,NFAT
R5923 T7431 T7434 compound ATF-2,[
R5924 T7432 T7434 compound /,[
R5925 T7433 T7434 compound Jun,[
R5926 T7434 T7429 conj [,NFAT
R5927 T7435 T7436 nummod 20,]
R5928 T7436 T7427 appos ],calcineurin
R5929 T7437 T7409 punct .,is

GO-BP

Id Subject Object Predicate Lexical cue
T10174 93-104 http://purl.obolibrary.org/obo/GO_0004722 denotes calcineurin
T10175 93-104 http://purl.obolibrary.org/obo/GO_0004723 denotes calcineurin

GO-MF

Id Subject Object Predicate Lexical cue
T10255 93-104 http://purl.obolibrary.org/obo/GO_0004722 denotes calcineurin
T10256 93-104 http://purl.obolibrary.org/obo/GO_0004723 denotes calcineurin

GO-CC

Id Subject Object Predicate Lexical cue
T10269 47-52 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T6864 0-130 Sentence denotes TNF is one of the first cytokines induced by T-cells [42] and its expression is regulated by calcineurin, NFAT and ATF-2/Jun [20].
T140 0-130 Sentence denotes TNF is one of the first cytokines induced by T-cells [42] and its expression is regulated by calcineurin, NFAT and ATF-2/Jun [20].

events-check-again

Id Subject Object Predicate Lexical cue
T11003 115-120 Protein denotes ATF-2

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T11197 0-3 Protein denotes TNF
T11198 93-104 Protein denotes calcineurin
T11199 106-110 Protein denotes NFAT
T11200 115-120 Protein denotes ATF-2
T11201 121-124 Protein denotes Jun
T11202 66-76 Gene_expression denotes expression
T11203 66-76 Gene_expression denotes expression
T11204 66-76 Gene_expression denotes expression
T11205 80-89 Regulation denotes regulated
T11206 80-89 Regulation denotes regulated
T11207 80-89 Regulation denotes regulated
T11208 80-89 Regulation denotes regulated
T11209 80-89 Regulation denotes regulated
T11210 80-89 Regulation denotes regulated
T11211 80-89 Regulation denotes regulated
T11212 80-89 Regulation denotes regulated
T11213 80-89 Regulation denotes regulated
T11214 80-89 Regulation denotes regulated
T11215 80-89 Regulation denotes regulated
T11216 80-89 Regulation denotes regulated
R8943 T11197 T11202 themeOf TNF,expression
R8945 T11198 T11205 causeOf calcineurin,regulated
R8946 T11198 T11206 causeOf calcineurin,regulated
R8947 T11198 T11207 causeOf calcineurin,regulated
R8948 T11199 T11208 causeOf NFAT,regulated
R8949 T11199 T11209 causeOf NFAT,regulated
R8950 T11199 T11210 causeOf NFAT,regulated
R8951 T11200 T11203 themeOf ATF-2,expression
R8952 T11200 T11211 causeOf ATF-2,regulated
R8953 T11200 T11212 causeOf ATF-2,regulated
R8954 T11200 T11213 causeOf ATF-2,regulated
R8955 T11201 T11204 themeOf Jun,expression
R8956 T11201 T11214 causeOf Jun,regulated
R8957 T11201 T11215 causeOf Jun,regulated
R8958 T11201 T11216 causeOf Jun,regulated
R8959 T11202 T11205 themeOf expression,regulated
R8960 T11202 T11208 themeOf expression,regulated
R8961 T11202 T11211 themeOf expression,regulated
R8962 T11202 T11214 themeOf expression,regulated
R8963 T11203 T11206 themeOf expression,regulated
R8964 T11203 T11209 themeOf expression,regulated
R8965 T11203 T11212 themeOf expression,regulated
R8966 T11203 T11215 themeOf expression,regulated
R8967 T11204 T11207 themeOf expression,regulated
R8968 T11204 T11210 themeOf expression,regulated
R8969 T11204 T11213 themeOf expression,regulated
R8970 T11204 T11216 themeOf expression,regulated

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T6741 115-120 Protein denotes ATF-2

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T9950 0-3 P01375 denotes TNF
T9951 115-120 P15336 denotes ATF-2
T9952 121-124 P05412 denotes Jun

test2

Id Subject Object Predicate Lexical cue
T6599 34-41 Positive_regulation denotes induced
T6600 66-76 Gene_expression denotes expression
T6601 80-89 Regulation denotes regulated
T6602 115-120 Protein denotes ATF-2
R5256 T6600 T6601 themeOf expression,regulated
R5257 T6602 T6601 causeOf ATF-2,regulated