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PMC:2889865 / 12925-13134 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T5306 0-4 NN denotes Ca2+
T5307 5-8 VB denotes was
T5308 9-17 VB denotes observed
T5309 18-20 TO denotes to
T5310 21-29 VB denotes increase
T5311 30-34 NN denotes AP-1
T5312 35-43 NN denotes activity
T5313 44-45 -LRB- denotes (
T5314 45-51 NN denotes figure
T5315 52-54 NN denotes 1c
T5316 54-55 -RRB- denotes )
T5317 56-59 CC denotes and
T5318 60-66 VB denotes reduce
T5319 67-72 NN denotes NF-κB
T5320 73-81 NN denotes activity
T5321 82-83 -LRB- denotes (
T5322 83-89 NN denotes figure
T5323 90-92 NN denotes 2e
T5324 92-93 -RRB- denotes )
T5325 93-94 -COLON- denotes ;
T5326 95-104 RB denotes therefore
T5327 104-105 -COMMA- denotes ,
T5328 106-108 PRP denotes we
T5329 109-116 VB denotes exposed
T5330 117-124 NN denotes T-cells
T5331 125-127 TO denotes to
T5332 128-129 DT denotes a
T5333 130-133 NN denotes PKC
T5334 134-143 NN denotes inhibitor
T5335 144-152 RB denotes together
T5336 153-157 IN denotes with
T5337 158-161 NN denotes PMA
T5338 162-164 TO denotes to
T5339 165-174 VB denotes determine
T5340 175-178 PRP-DOLLAR- denotes its
T5341 179-185 NN denotes effect
T5342 186-188 IN denotes on
T5343 189-197 NN denotes cytokine
T5344 198-208 NN denotes expression
R4354 T5306 T5307 arg1Of Ca2+,was
R4355 T5306 T5308 arg2Of Ca2+,observed
R4356 T5306 T5310 arg1Of Ca2+,increase
R4357 T5306 T5318 arg1Of Ca2+,reduce
R4358 T5308 T5307 arg2Of observed,was
R4359 T5308 T5325 arg1Of observed,;
R4360 T5310 T5317 arg1Of increase,and
R4361 T5312 T5310 arg2Of activity,increase
R4362 T5312 T5311 arg1Of activity,AP-1
R4363 T5312 T5313 arg1Of activity,(
R4364 T5315 T5313 arg2Of 1c,(
R4365 T5315 T5314 arg1Of 1c,figure
R4366 T5316 T5313 arg3Of ),(
R4367 T5317 T5308 arg3Of and,observed
R4368 T5317 T5309 arg1Of and,to
R4369 T5318 T5317 arg2Of reduce,and
R4370 T5320 T5318 arg2Of activity,reduce
R4371 T5320 T5319 arg1Of activity,NF-κB
R4372 T5320 T5321 arg1Of activity,(
R4373 T5323 T5321 arg2Of 2e,(
R4374 T5323 T5322 arg1Of 2e,figure
R4375 T5324 T5321 arg3Of ),(
R4376 T5328 T5329 arg1Of we,exposed
R4377 T5328 T5339 arg1Of we,determine
R4378 T5329 T5325 arg2Of exposed,;
R4379 T5329 T5326 arg1Of exposed,therefore
R4380 T5329 T5327 arg1Of exposed,","
R4381 T5329 T5331 arg1Of exposed,to
R4382 T5329 T5335 arg1Of exposed,together
R4383 T5329 T5338 modOf exposed,to
R4384 T5330 T5329 arg2Of T-cells,exposed
R4385 T5334 T5331 arg2Of inhibitor,to
R4386 T5334 T5332 arg1Of inhibitor,a
R4387 T5334 T5333 arg1Of inhibitor,PKC
R4388 T5335 T5336 arg1Of together,with
R4389 T5337 T5336 arg2Of PMA,with
R4390 T5339 T5338 arg1Of determine,to
R4391 T5341 T5339 arg2Of effect,determine
R4392 T5341 T5340 arg1Of effect,its
R4393 T5341 T5342 arg1Of effect,on
R4394 T5344 T5342 arg2Of expression,on
R4395 T5344 T5343 arg1Of expression,cytokine

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T4933 0-3 CD denotes Ca2
T4934 3-4 NN denotes +
T4935 5-8 VBD denotes was
T4936 9-17 VBN denotes observed
T4937 18-20 TO denotes to
T4938 21-29 VB denotes increase
T4939 30-34 JJ denotes AP-1
T4940 35-43 NN denotes activity
T4941 44-45 -LRB- denotes (
T4942 45-51 NN denotes figure
T4943 52-54 CD denotes 1c
T4944 54-55 -RRB- denotes )
T4945 56-59 CC denotes and
T4946 60-66 VB denotes reduce
T4947 67-72 JJ denotes NF-κB
T4948 73-81 NN denotes activity
T4949 82-83 -LRB- denotes (
T4950 83-89 NN denotes figure
T4951 90-92 CD denotes 2e
T4952 92-93 -RRB- denotes )
T4953 93-94 : denotes ;
T4954 95-104 RB denotes therefore
T4955 104-105 , denotes ,
T4956 106-108 PRP denotes we
T4957 109-116 VBD denotes exposed
T4958 117-124 NNS denotes T-cells
T4959 125-127 TO denotes to
T4960 128-129 DT denotes a
T4961 130-133 NNP denotes PKC
T4962 134-143 NN denotes inhibitor
T4963 144-152 RB denotes together
T4964 153-157 IN denotes with
T4965 158-161 NNP denotes PMA
T4966 162-164 TO denotes to
T4967 165-174 VB denotes determine
T4968 175-178 PRP$ denotes its
T4969 179-185 NN denotes effect
T4970 186-188 IN denotes on
T4971 189-197 NN denotes cytokine
T4972 198-208 NN denotes expression
T4973 208-209 . denotes .
R3982 T4933 T4934 nummod Ca2,+
R3983 T4934 T4936 nsubjpass +,observed
R3984 T4935 T4936 auxpass was,observed
R3985 T4936 T4957 ccomp observed,exposed
R3986 T4937 T4938 aux to,increase
R3987 T4938 T4936 xcomp increase,observed
R3988 T4939 T4940 amod AP-1,activity
R3989 T4940 T4938 dobj activity,increase
R3990 T4941 T4942 punct (,figure
R3991 T4942 T4938 parataxis figure,increase
R3992 T4943 T4942 nummod 1c,figure
R3993 T4944 T4942 punct ),figure
R3994 T4945 T4938 cc and,increase
R3995 T4946 T4938 conj reduce,increase
R3996 T4947 T4948 amod NF-κB,activity
R3997 T4948 T4946 dobj activity,reduce
R3998 T4949 T4950 punct (,figure
R3999 T4950 T4957 ccomp figure,exposed
R4000 T4951 T4950 nummod 2e,figure
R4001 T4952 T4950 punct ),figure
R4002 T4953 T4957 punct ;,exposed
R4003 T4954 T4957 advmod therefore,exposed
R4004 T4955 T4957 punct ",",exposed
R4005 T4956 T4957 nsubj we,exposed
R4006 T4957 T4957 ROOT exposed,exposed
R4007 T4958 T4957 dobj T-cells,exposed
R4008 T4959 T4957 prep to,exposed
R4009 T4960 T4962 det a,inhibitor
R4010 T4961 T4962 compound PKC,inhibitor
R4011 T4962 T4959 pobj inhibitor,to
R4012 T4963 T4964 advmod together,with
R4013 T4964 T4957 prep with,exposed
R4014 T4965 T4964 pobj PMA,with
R4015 T4966 T4967 aux to,determine
R4016 T4967 T4957 advcl determine,exposed
R4017 T4968 T4969 poss its,effect
R4018 T4969 T4967 dobj effect,determine
R4019 T4970 T4969 prep on,effect
R4020 T4971 T4972 amod cytokine,expression
R4021 T4972 T4970 pobj expression,on
R4022 T4973 T4957 punct .,exposed

GO-BP

Id Subject Object Predicate Lexical cue
T5558 130-133 http://purl.obolibrary.org/obo/GO_0004697 denotes PKC

GO-MF

Id Subject Object Predicate Lexical cue
T5577 130-133 http://purl.obolibrary.org/obo/GO_0004697 denotes PKC

GO-CC

Id Subject Object Predicate Lexical cue
T5587 119-124 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T4759 0-209 Sentence denotes Ca2+ was observed to increase AP-1 activity (figure 1c) and reduce NF-κB activity (figure 2e); therefore, we exposed T-cells to a PKC inhibitor together with PMA to determine its effect on cytokine expression.
T95 0-209 Sentence denotes Ca2+ was observed to increase AP-1 activity (figure 1c) and reduce NF-κB activity (figure 2e); therefore, we exposed T-cells to a PKC inhibitor together with PMA to determine its effect on cytokine expression.

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T5898 30-34 Protein denotes AP-1
T5899 67-72 Protein denotes NF-κB
T5900 130-133 Protein denotes PKC
T5901 21-29 Positive_regulation denotes increase
T5902 60-66 Negative_regulation denotes reduce
T5903 134-143 Negative_regulation denotes inhibitor
R4767 T5898 T5901 themeOf AP-1,increase
R4768 T5899 T5902 themeOf NF-κB,reduce
R4769 T5900 T5903 themeOf PKC,inhibitor

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T5520 30-34 P05412 denotes AP-1