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PMC:2889865 / 1139-1449 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T724 11-25 VB denotes down-regulated
T725 26-28 IN denotes by
T726 29-31 NNP denotes HK
T727 32-34 NNP denotes E.
T728 35-39 FW denotes coli
T729 41-45 NN denotes AP-1
T730 46-56 NN denotes activation
T731 57-60 VB denotes was
T732 61-74 RB denotes significantly
T733 75-84 VB denotes increased
T734 85-86 CD denotes 2
T735 87-88 NN denotes h
T736 89-94 IN denotes after
T737 95-98 NN denotes PMA
T738 99-107 NN denotes exposure
T739 108-111 CC denotes and
T740 112-121 VB denotes continued
T741 122-124 TO denotes to
T742 125-133 VB denotes increase
T743 134-144 RB denotes thereafter
T744 146-148 IN denotes In
T745 149-157 NN denotes contrast
T746 157-158 -COMMA- denotes ,
T747 159-164 NN denotes NF-κB
T748 165-174 VB denotes responded
T749 175-177 TO denotes to
T750 178-181 NN denotes PMA
T751 182-190 NN denotes exposure
T752 191-193 IN denotes by
T753 194-195 DT denotes a
T754 196-201 JJ denotes rapid
T755 202-215 NN denotes up-regulation
T756 216-224 VB denotes followed
T757 225-227 IN denotes by
T758 228-229 DT denotes a
T759 230-240 JJ denotes subsequent
T760 241-256 NN denotes down-regulation
T761 258-267 VB denotes Increased
T762 268-281 JJ denotes intracellular
T763 282-286 NN denotes Ca2+
T764 287-301 NN denotes concentrations
R611 T727 T724 arg1Of E.,down-regulated
R612 T727 T725 arg2Of E.,by
R613 T727 T726 arg1Of E.,HK
R614 T727 T728 arg1Of E.,coli
R615 T730 T729 arg1Of activation,AP-1
R616 T730 T731 arg1Of activation,was
R617 T730 T733 arg2Of activation,increased
R618 T730 T740 arg1Of activation,continued
R619 T730 T742 arg1Of activation,increase
R620 T733 T731 arg2Of increased,was
R621 T733 T732 arg1Of increased,significantly
R622 T733 T736 arg1Of increased,after
R623 T733 T739 arg1Of increased,and
R624 T735 T734 arg1Of h,2
R625 T736 T735 arg1Of after,h
R626 T738 T736 arg2Of exposure,after
R627 T738 T737 arg1Of exposure,PMA
R628 T740 T739 arg2Of continued,and
R629 T742 T740 arg2Of increase,continued
R630 T742 T741 arg1Of increase,to
R631 T742 T743 arg1Of increase,thereafter
R632 T745 T744 arg2Of contrast,In
R633 T747 T748 arg1Of NF-κB,responded
R634 T748 T744 arg1Of responded,In
R635 T748 T746 arg1Of responded,","
R636 T748 T749 arg1Of responded,to
R637 T748 T752 arg1Of responded,by
R638 T751 T749 arg2Of exposure,to
R639 T751 T750 arg1Of exposure,PMA
R640 T755 T752 arg2Of up-regulation,by
R641 T755 T753 arg1Of up-regulation,a
R642 T755 T754 arg1Of up-regulation,rapid
R643 T755 T756 arg2Of up-regulation,followed
R644 T760 T756 arg1Of down-regulation,followed
R645 T760 T757 arg2Of down-regulation,by
R646 T760 T758 arg1Of down-regulation,a
R647 T760 T759 arg1Of down-regulation,subsequent
R648 T764 T761 arg2Of concentrations,Increased
R649 T764 T762 arg1Of concentrations,intracellular
R650 T764 T763 arg1Of concentrations,Ca2+

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T328 11-25 VBN denotes down-regulated
T329 26-28 IN denotes by
T330 29-31 NNP denotes HK
T331 32-34 NNP denotes E.
T332 35-39 NNS denotes coli
T333 39-40 . denotes .
T334 41-45 CD denotes AP-1
T335 46-56 NN denotes activation
T336 57-60 VBD denotes was
T337 61-74 RB denotes significantly
T338 75-84 VBN denotes increased
T339 85-86 CD denotes 2
T340 87-88 NN denotes h
T341 89-94 IN denotes after
T342 95-98 NNP denotes PMA
T343 99-107 NN denotes exposure
T344 108-111 CC denotes and
T345 112-121 VBD denotes continued
T346 122-124 TO denotes to
T347 125-133 VB denotes increase
T348 134-144 RB denotes thereafter
T349 144-145 . denotes .
T350 146-148 IN denotes In
T351 149-157 NN denotes contrast
T352 157-158 , denotes ,
T353 159-164 NNP denotes NF-κB
T354 165-174 VBD denotes responded
T355 175-177 TO denotes to
T356 178-181 NNP denotes PMA
T357 182-190 NN denotes exposure
T359 191-193 IN denotes by
T360 194-195 DT denotes a
T361 196-201 JJ denotes rapid
T362 202-215 NN denotes up-regulation
T363 216-224 VBN denotes followed
T364 225-227 IN denotes by
T365 228-229 DT denotes a
T366 230-240 JJ denotes subsequent
T367 241-256 NN denotes down-regulation
T368 256-257 . denotes .
T369 258-267 VBN denotes Increased
T370 268-281 JJ denotes intracellular
T371 282-285 NNP denotes Ca2
T372 285-286 NN denotes +
T373 287-301 NNS denotes concentrations
R219 T329 T328 agent by,down-regulated
R220 T330 T332 compound HK,coli
R221 T331 T332 compound E.,coli
R222 T332 T329 pobj coli,by
R224 T334 T335 nummod AP-1,activation
R225 T335 T338 nsubjpass activation,increased
R226 T336 T338 auxpass was,increased
R227 T337 T338 advmod significantly,increased
R228 T338 T338 ROOT increased,increased
R229 T339 T340 nummod 2,h
R230 T340 T338 npadvmod h,increased
R231 T341 T338 prep after,increased
R232 T342 T343 compound PMA,exposure
R233 T343 T341 pobj exposure,after
R234 T344 T338 cc and,increased
R235 T345 T338 conj continued,increased
R236 T346 T347 aux to,increase
R237 T347 T345 xcomp increase,continued
R238 T348 T347 advmod thereafter,increase
R239 T349 T338 punct .,increased
R240 T350 T354 prep In,responded
R241 T351 T350 pobj contrast,In
R242 T352 T354 punct ",",responded
R243 T353 T354 nsubj NF-κB,responded
R244 T354 T354 ROOT responded,responded
R245 T355 T354 prep to,responded
R246 T356 T357 compound PMA,exposure
R247 T357 T355 pobj exposure,to
R249 T359 T357 prep by,exposure
R250 T360 T362 det a,up-regulation
R251 T361 T362 amod rapid,up-regulation
R252 T362 T359 pobj up-regulation,by
R253 T363 T357 acl followed,exposure
R254 T364 T363 agent by,followed
R255 T365 T367 det a,down-regulation
R256 T366 T367 amod subsequent,down-regulation
R257 T367 T364 pobj down-regulation,by
R258 T368 T354 punct .,responded
R259 T369 T373 amod Increased,concentrations
R260 T370 T373 amod intracellular,concentrations
R261 T371 T373 compound Ca2,concentrations
R262 T372 T373 compound +,concentrations

GO-BP

Id Subject Object Predicate Lexical cue
T974 205-215 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T975 246-256 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation

GO-CC

Id Subject Object Predicate Lexical cue
T1022 268-281 http://purl.obolibrary.org/obo/GO_0005622 denotes intracellular

sentences

Id Subject Object Predicate Lexical cue
T127 41-145 Sentence denotes AP-1 activation was significantly increased 2 h after PMA exposure and continued to increase thereafter.
T128 146-257 Sentence denotes In contrast, NF-κB responded to PMA exposure by a rapid up-regulation followed by a subsequent down-regulation.
T10 41-145 Sentence denotes AP-1 activation was significantly increased 2 h after PMA exposure and continued to increase thereafter.
T11 146-257 Sentence denotes In contrast, NF-κB responded to PMA exposure by a rapid up-regulation followed by a subsequent down-regulation.

events-check-again

Id Subject Object Predicate Lexical cue
T1228 11-25 Negative_regulation denotes down-regulated

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T1288 41-45 Protein denotes AP-1
T1289 46-56 Positive_regulation denotes activation
T1290 75-84 Positive_regulation denotes increased
T1291 125-133 Positive_regulation denotes increase
T1292 159-164 Protein denotes NF-κB
T1293 202-215 Positive_regulation denotes up-regulation
T1294 241-256 Negative_regulation denotes down-regulation
T1295 202-215 Positive_regulation denotes up-regulation
R917 T1288 T1289 themeOf AP-1,activation
R918 T1289 T1290 themeOf activation,increased
R919 T1289 T1291 themeOf activation,increase
R920 T1292 T1293 themeOf NF-κB,up-regulation
R921 T1293 T1294 themeOf up-regulation,down-regulation
R922 T1294 T1295 themeOf down-regulation,up-regulation

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T95 11-25 Negative_regulation denotes down-regulated

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T939 41-45 P05412 denotes AP-1

test2

Id Subject Object Predicate Lexical cue
T55 11-25 Negative_regulation denotes down-regulated