> top > docs > PMC:2817507 > spans > 9875-10148 > annotations

PMC:2817507 / 9875-10148 JSONTXT

Annnotations TAB JSON ListView MergeView

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T4616 118-121 NN denotes day
T4615 114-117 JJ denotes 3rd
T4614 110-113 DT denotes the
T4613 107-109 IN denotes on
T4612 100-106 VB denotes peaked
T4611 98-99 -COMMA- denotes ,
T4610 97-98 -RRB- denotes )
T4609 94-97 CD denotes .05
T4608 92-93 SYM denotes <
T4607 90-91 NN denotes P
T4606 89-90 -LRB- denotes (
T4605 85-88 NN denotes ICH
T4604 79-84 IN denotes after
T4603 71-78 NN denotes 6 hours
T4602 66-70 IN denotes from
T4601 57-65 VB denotes starting
T4600 47-56 VB denotes increased
T4599 33-46 RB denotes significantly
T4598 29-32 NN denotes ICH
T4597 23-28 IN denotes after
T4596 18-22 NN denotes mRNA
T4595 13-17 NN denotes TLR4
T4594 9-12 DT denotes the
T4593 7-8 -COMMA- denotes ,
T4592 0-7 RB denotes However
T4652 271-272 -RRB- denotes )
T4651 270-271 CD denotes 1
T4650 263-269 NNP denotes Figure
T4649 261-262 -COMMA- denotes ,
T4648 258-261 CD denotes .05
T4647 256-257 JJ denotes <
T4646 254-255 NN denotes P
T4645 253-254 -LRB- denotes (
T4644 245-252 NN denotes control
T4643 238-244 NN denotes saline
T4642 233-237 IN denotes with
T4641 224-232 VB denotes compared
T4640 218-223 NN denotes level
T4639 211-217 JJ denotes higher
T4638 209-210 DT denotes a
T4637 198-208 VB denotes maintained
T4636 192-197 RB denotes still
T4635 188-191 CC denotes but
T4634 186-187 -COMMA- denotes ,
T4633 185-186 -RRB- denotes )
T4632 182-185 CD denotes .05
T4631 180-181 SYM denotes <
T4630 178-179 NN denotes P
T4629 177-178 -LRB- denotes (
T4628 173-176 NN denotes ICH
T4627 167-172 IN denotes after
T4626 163-166 NN denotes day
T4625 159-162 JJ denotes 7th
T4624 155-158 DT denotes the
T4623 152-154 IN denotes on
T4622 142-151 VB denotes decreased
T4621 137-141 RB denotes then
T4620 133-136 CC denotes and
T4619 131-132 -COMMA- denotes ,
T4618 128-131 NN denotes ICH
T4617 122-127 IN denotes after
R3562 T4596 T4594 arg1Of mRNA,the
R3563 T4596 T4595 arg1Of mRNA,TLR4
R3564 T4596 T4597 arg1Of mRNA,after
R3565 T4596 T4600 arg1Of mRNA,increased
R3566 T4596 T4612 arg1Of mRNA,peaked
R3567 T4596 T4622 arg1Of mRNA,decreased
R3568 T4596 T4637 arg1Of mRNA,maintained
R3569 T4598 T4597 arg2Of ICH,after
R3570 T4600 T4611 arg1Of increased,","
R3571 T4601 T4600 arg2Of starting,increased
R3572 T4601 T4602 arg1Of starting,from
R3573 T4601 T4604 arg1Of starting,after
R3574 T4603 T4602 arg2Of 6 hours,from
R3575 T4605 T4604 arg2Of ICH,after
R3576 T4605 T4606 arg1Of ICH,(
R3577 T4607 T4606 arg2Of P,(
R3578 T4607 T4608 arg1Of P,<
R3579 T4608 T4609 arg1Of <,.05
R3580 T4610 T4606 arg3Of ),(
R3581 T4611 T4620 arg1Of ",",and
R3582 T4612 T4611 arg2Of peaked,","
R3583 T4612 T4613 arg1Of peaked,on
R3584 T4616 T4613 arg2Of day,on
R3585 T4616 T4614 arg1Of day,the
R3586 T4616 T4615 arg1Of day,3rd
R3587 T4616 T4617 arg1Of day,after
R3588 T4618 T4617 arg2Of ICH,after
R3589 T4620 T4592 arg1Of and,However
R3590 T4620 T4593 arg1Of and,","
R3591 T4620 T4599 arg1Of and,significantly
R3592 T4620 T4619 arg1Of and,","
R3593 T4622 T4623 arg1Of decreased,on
R3594 T4622 T4627 arg1Of decreased,after
R3595 T4622 T4635 arg1Of decreased,but
R3596 T4626 T4623 arg2Of day,on
R3597 T4626 T4624 arg1Of day,the
R3598 T4626 T4625 arg1Of day,7th
R3599 T4628 T4627 arg2Of ICH,after
R3600 T4628 T4629 arg1Of ICH,(
R3601 T4630 T4629 arg2Of P,(
R3602 T4630 T4631 arg1Of P,<
R3603 T4631 T4632 arg1Of <,.05
R3604 T4633 T4629 arg3Of ),(
R3605 T4635 T4620 arg2Of but,and
R3606 T4635 T4621 arg1Of but,then
R3607 T4635 T4634 arg1Of but,","
R3608 T4637 T4635 arg2Of maintained,but
R3609 T4637 T4636 arg1Of maintained,still
R3610 T4637 T4641 arg1Of maintained,compared
R3611 T4640 T4637 arg2Of level,maintained
R3612 T4640 T4638 arg1Of level,a
R3613 T4640 T4639 arg1Of level,higher
R3614 T4642 T4641 arg2Of with,compared
R3615 T4644 T4642 arg2Of control,with
R3616 T4644 T4643 arg1Of control,saline
R3617 T4644 T4645 arg1Of control,(
R3618 T4646 T4645 arg2Of P,(
R3619 T4646 T4647 arg1Of P,<
R3620 T4646 T4649 arg1Of P,","
R3621 T4647 T4648 arg1Of <,.05
R3622 T4650 T4649 arg2Of Figure,","
R3623 T4650 T4651 arg1Of Figure,1
R3624 T4652 T4645 arg3Of ),(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T4523 13-17 Protein denotes TLR4

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T4776 13-17 http://www.uniprot.org/uniprot/O00206 denotes TLR4

sentences

Id Subject Object Predicate Lexical cue
T4510 0-273 Sentence denotes However, the TLR4 mRNA after ICH significantly increased starting from 6 hours after ICH (P < .05), peaked on the 3rd day after ICH, and then decreased on the 7th day after ICH (P < .05), but still maintained a higher level compared with saline control (P < .05, Figure 1).
T106 0-273 Sentence denotes However, the TLR4 mRNA after ICH significantly increased starting from 6 hours after ICH (P < .05), peaked on the 3rd day after ICH, and then decreased on the 7th day after ICH (P < .05), but still maintained a higher level compared with saline control (P < .05, Figure 1).

simple1

Id Subject Object Predicate Lexical cue
T4542 13-17 Protein denotes TLR4

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T4828 142-151 Negative_regulation denotes decreased
T4827 47-56 Positive_regulation denotes increased
T4822 13-17 Protein denotes TLR4
R3767 T4822 T4828 themeOf TLR4,decreased
R3768 T4822 T4827 themeOf TLR4,increased

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T4781 13-17 Protein denotes TLR4
T4787 47-56 Positive_regulation denotes increased
T4786 142-151 Negative_regulation denotes decreased
R3745 T4781 T4786 themeOf TLR4,decreased
R3746 T4781 T4787 themeOf TLR4,increased

DLUT931

Id Subject Object Predicate Lexical cue
T4802 142-151 Negative_regulation denotes decreased
T4801 100-106 Positive_regulation denotes peaked
T4800 47-56 Positive_regulation denotes increased
T4799 18-22 Transcription denotes mRNA
T4792 13-17 Protein denotes TLR4
R3751 T4792 T4799 themeOf TLR4,mRNA
R3752 T4792 T4802 themeOf TLR4,decreased
R3755 T4799 T4800 themeOf mRNA,increased
R3756 T4799 T4801 themeOf mRNA,peaked
R3757 T4799 T4802 themeOf mRNA,decreased

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T4843 9-88 Positive_regulation denotes the TLR4 mRNA after ICH significantly increased starting from 6 hours after ICH
T4841 9-32 Protein denotes the TLR4 mRNA after ICH
T4835 90-91 Entity denotes P
T4834 159-162 Entity denotes 7th
T4832 254-257 Entity denotes P <
T4831 13-17 Protein denotes TLR4
T4830 238-244 Entity denotes saline
R3769 T4841 T4843 causeOf the TLR4 mRNA after ICH,the TLR4 mRNA after ICH significantly increased starting from 6 hours after ICH

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T4768 272-273 . denotes .
T4767 271-272 -RRB- denotes )
T4766 270-271 CD denotes 1
T4765 263-269 NNP denotes Figure
T4764 261-262 , denotes ,
T4763 258-261 CD denotes .05
T4762 256-257 CD denotes <
T4761 254-255 NNP denotes P
T4760 253-254 -LRB- denotes (
T4759 245-252 NN denotes control
T4758 238-244 NN denotes saline
T4757 233-237 IN denotes with
T4756 224-232 VBN denotes compared
T4755 218-223 NN denotes level
T4754 211-217 JJR denotes higher
T4753 209-210 DT denotes a
T4752 198-208 VBD denotes maintained
T4751 192-197 RB denotes still
T4750 188-191 CC denotes but
T4749 186-187 , denotes ,
T4748 185-186 -RRB- denotes )
T4747 182-185 CD denotes .05
T4746 180-181 CD denotes <
T4745 178-179 NNP denotes P
T4744 177-178 -LRB- denotes (
T4743 173-176 NNP denotes ICH
T4742 167-172 IN denotes after
T4741 163-166 NN denotes day
T4740 159-162 JJ denotes 7th
T4739 155-158 DT denotes the
T4738 152-154 IN denotes on
T4737 142-151 VBD denotes decreased
T4736 137-141 RB denotes then
T4735 133-136 CC denotes and
T4734 131-132 , denotes ,
T4733 128-131 NNP denotes ICH
T4732 122-127 IN denotes after
T4731 118-121 NN denotes day
T4730 114-117 JJ denotes 3rd
T4729 110-113 DT denotes the
T4728 107-109 IN denotes on
T4727 100-106 VBD denotes peaked
T4726 98-99 , denotes ,
T4725 97-98 -RRB- denotes )
T4724 94-97 CD denotes .05
T4723 92-93 CD denotes <
T4722 90-91 NNP denotes P
T4721 89-90 -LRB- denotes (
T4720 85-88 NNP denotes ICH
T4719 79-84 IN denotes after
T4718 73-78 NNS denotes hours
T4717 71-72 CD denotes 6
T4716 66-70 IN denotes from
T4715 57-65 VBG denotes starting
T4714 47-56 VBD denotes increased
T4713 33-46 RB denotes significantly
T4712 29-32 NNP denotes ICH
T4711 23-28 IN denotes after
T4710 18-22 NNP denotes mRNA
T4709 13-17 NNP denotes TLR4
T4708 9-12 DT denotes the
T4707 7-8 , denotes ,
T4706 0-7 RB denotes However
R3678 T4706 T4727 advmod However,peaked
R3679 T4707 T4727 punct ",",peaked
R3680 T4708 T4710 det the,mRNA
R3681 T4709 T4710 compound TLR4,mRNA
R3682 T4710 T4727 nsubj mRNA,peaked
R3683 T4711 T4714 mark after,increased
R3684 T4712 T4714 nsubj ICH,increased
R3685 T4713 T4714 advmod significantly,increased
R3686 T4714 T4727 advcl increased,peaked
R3687 T4715 T4727 advcl starting,peaked
R3688 T4716 T4715 prep from,starting
R3689 T4717 T4718 nummod 6,hours
R3690 T4718 T4716 pobj hours,from
R3691 T4719 T4727 mark after,peaked
R3692 T4720 T4727 nsubj ICH,peaked
R3693 T4721 T4720 punct (,ICH
R3694 T4722 T4725 nmod P,)
R3695 T4723 T4724 nummod <,.05
R3696 T4724 T4722 appos .05,P
R3697 T4725 T4720 punct ),ICH
R3698 T4726 T4727 punct ",",peaked
R3699 T4727 T4727 ROOT peaked,peaked
R3700 T4728 T4727 prep on,peaked
R3701 T4729 T4731 det the,day
R3702 T4730 T4731 amod 3rd,day
R3703 T4731 T4728 pobj day,on
R3704 T4732 T4731 prep after,day
R3705 T4733 T4732 pobj ICH,after
R3706 T4734 T4727 punct ",",peaked
R3707 T4735 T4727 cc and,peaked
R3708 T4736 T4737 advmod then,decreased
R3709 T4737 T4727 conj decreased,peaked
R3710 T4738 T4737 prep on,decreased
R3711 T4739 T4741 det the,day
R3712 T4740 T4741 amod 7th,day
R3713 T4741 T4738 pobj day,on
R3714 T4742 T4741 prep after,day
R3715 T4743 T4742 pobj ICH,after
R3716 T4744 T4743 punct (,ICH
R3717 T4745 T4743 appos P,ICH
R3718 T4746 T4745 nummod <,P
R3719 T4747 T4745 appos .05,P
R3720 T4748 T4745 punct ),P
R3721 T4749 T4743 punct ",",ICH
R3722 T4750 T4737 cc but,decreased
R3723 T4751 T4752 advmod still,maintained
R3724 T4752 T4737 conj maintained,decreased
R3725 T4753 T4755 det a,level
R3726 T4754 T4755 amod higher,level
R3727 T4755 T4752 dobj level,maintained
R3728 T4756 T4755 prep compared,level
R3729 T4757 T4756 prep with,compared
R3730 T4758 T4759 compound saline,control
R3731 T4759 T4757 pobj control,with
R3732 T4760 T4759 punct (,control
R3733 T4761 T4765 nmod P,Figure
R3734 T4762 T4761 nummod <,P
R3735 T4763 T4761 nummod .05,P
R3736 T4764 T4765 punct ",",Figure
R3737 T4765 T4759 appos Figure,control
R3738 T4766 T4765 nummod 1,Figure
R3739 T4767 T4759 punct ),control
R3740 T4768 T4727 punct .,peaked

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T4532 142-151 Localization denotes decreased
T4531 47-56 Positive_regulation denotes increased
T4530 13-22 Protein denotes TLR4 mRNA
R3512 T4530 T4531 themeOf TLR4 mRNA,increased
R3513 T4530 T4532 themeOf TLR4 mRNA,decreased

testone

Id Subject Object Predicate Lexical cue
T4487 142-151 Negative_regulation denotes decreased
T4486 47-56 Positive_regulation denotes increased
T4483 13-17 Protein denotes TLR4

test3

Id Subject Object Predicate Lexical cue
T4500 142-151 Negative_regulation denotes decreased
T4499 47-56 Positive_regulation denotes increased
T4498 13-17 Protein denotes TLR4
T4492 13-17 Protein denotes TLR4
R3505 T4498 T4499 themeOf TLR4,increased
R3506 T4498 T4500 themeOf TLR4,decreased