PMC:2817507 / 7751-8455 JSONTXT

Annnotations TAB JSON ListView MergeView

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T3847","span":{"begin":695,"end":703},"obj":"NN"},{"id":"T3846","span":{"begin":689,"end":694},"obj":"NN"},{"id":"T3845","span":{"begin":671,"end":688},"obj":"JJ"},{"id":"T3844","span":{"begin":667,"end":670},"obj":"CC"},{"id":"T3843","span":{"begin":654,"end":666},"obj":"NN"},{"id":"T3842","span":{"begin":645,"end":653},"obj":"VB"},{"id":"T3841","span":{"begin":642,"end":644},"obj":"IN"},{"id":"T3840","span":{"begin":631,"end":641},"obj":"VB"},{"id":"T3839","span":{"begin":626,"end":630},"obj":"VB"},{"id":"T3838","span":{"begin":618,"end":625},"obj":"NN"},{"id":"T3837","span":{"begin":614,"end":617},"obj":"DT"},{"id":"T3836","span":{"begin":606,"end":612},"obj":"NN"},{"id":"T3835","span":{"begin":596,"end":605},"obj":"VB"},{"id":"T3834","span":{"begin":591,"end":595},"obj":"IN"},{"id":"T3833","span":{"begin":584,"end":590},"obj":"VB"},{"id":"T3832","span":{"begin":578,"end":583},"obj":"VB"},{"id":"T3831","span":{"begin":572,"end":577},"obj":"IN"},{"id":"T3790","span":{"begin":302,"end":304},"obj":"IN"},{"id":"T3789","span":{"begin":293,"end":301},"obj":"VB"},{"id":"T3788","span":{"begin":291,"end":292},"obj":"-RRB-"},{"id":"T3787","span":{"begin":285,"end":291},"obj":"NN"},{"id":"T3786","span":{"begin":283,"end":284},"obj":"-COMMA-"},{"id":"T3785","span":{"begin":278,"end":283},"obj":"NN"},{"id":"T3784","span":{"begin":277,"end":278},"obj":"-LRB-"},{"id":"T3783","span":{"begin":268,"end":276},"obj":"NN"},{"id":"T3782","span":{"begin":260,"end":267},"obj":"JJ"},{"id":"T3781","span":{"begin":248,"end":259},"obj":"JJ"},{"id":"T3780","span":{"begin":244,"end":247},"obj":"DT"},{"id":"T3779","span":{"begin":239,"end":243},"obj":"IN"},{"id":"T3778","span":{"begin":229,"end":238},"obj":"VB"},{"id":"T3777","span":{"begin":224,"end":228},"obj":"VB"},{"id":"T3776","span":{"begin":214,"end":223},"obj":"NN"},{"id":"T3775","span":{"begin":210,"end":213},"obj":"NN"},{"id":"T3774","span":{"begin":206,"end":209},"obj":"DT"},{"id":"T3773","span":{"begin":203,"end":204},"obj":"-RRB-"},{"id":"T3772","span":{"begin":201,"end":203},"obj":"NNP"},{"id":"T3771","span":{"begin":199,"end":200},"obj":"-COMMA-"},{"id":"T3770","span":{"begin":189,"end":199},"obj":"NNP"},{"id":"T3769","span":{"begin":187,"end":188},"obj":"-COMMA-"},{"id":"T3768","span":{"begin":178,"end":187},"obj":"NNP"},{"id":"T3767","span":{"begin":169,"end":177},"obj":"NNP"},{"id":"T3766","span":{"begin":168,"end":169},"obj":"-LRB-"},{"id":"T3765","span":{"begin":158,"end":167},"obj":"NN"},{"id":"T3764","span":{"begin":154,"end":157},"obj":"NN"},{"id":"T3763","span":{"begin":147,"end":153},"obj":"NNP"},{"id":"T3762","span":{"begin":142,"end":146},"obj":"IN"},{"id":"T3761","span":{"begin":130,"end":141},"obj":"VB"},{"id":"T3760","span":{"begin":126,"end":129},"obj":"CC"},{"id":"T3759","span":{"begin":122,"end":125},"obj":"NN"},{"id":"T3758","span":{"begin":103,"end":121},"obj":"NN"},{"id":"T3757","span":{"begin":98,"end":102},"obj":"IN"},{"id":"T3756","span":{"begin":82,"end":97},"obj":"VB"},{"id":"T3755","span":{"begin":80,"end":81},"obj":"-COMMA-"},{"id":"T3754","span":{"begin":69,"end":80},"obj":"NN"},{"id":"T3753","span":{"begin":60,"end":68},"obj":"JJ"},{"id":"T3752","span":{"begin":56,"end":59},"obj":"NN"},{"id":"T3751","span":{"begin":51,"end":55},"obj":"IN"},{"id":"T3750","span":{"begin":42,"end":50},"obj":"VB"},{"id":"T3749","span":{"begin":37,"end":41},"obj":"VB"},{"id":"T3748","span":{"begin":28,"end":36},"obj":"NN"},{"id":"T3747","span":{"begin":19,"end":27},"obj":"JJ"},{"id":"T3746","span":{"begin":13,"end":18},"obj":"NN"},{"id":"T3745","span":{"begin":5,"end":12},"obj":"JJ"},{"id":"T3744","span":{"begin":0,"end":3},"obj":"CD"},{"id":"T3830","span":{"begin":570,"end":571},"obj":"-RRB-"},{"id":"T3829","span":{"begin":565,"end":570},"obj":"NNP"},{"id":"T3828","span":{"begin":563,"end":564},"obj":"-COMMA-"},{"id":"T3827","span":{"begin":559,"end":563},"obj":"NNP"},{"id":"T3826","span":{"begin":557,"end":558},"obj":"-COMMA-"},{"id":"T3825","span":{"begin":548,"end":557},"obj":"NNP"},{"id":"T3824","span":{"begin":546,"end":547},"obj":"-COMMA-"},{"id":"T3823","span":{"begin":533,"end":546},"obj":"NN"},{"id":"T3822","span":{"begin":506,"end":532},"obj":"NN"},{"id":"T3821","span":{"begin":505,"end":506},"obj":"-LRB-"},{"id":"T3820","span":{"begin":494,"end":504},"obj":"NN"},{"id":"T3819","span":{"begin":489,"end":493},"obj":"IN"},{"id":"T3818","span":{"begin":482,"end":488},"obj":"VB"},{"id":"T3817","span":{"begin":477,"end":481},"obj":"VB"},{"id":"T3816","span":{"begin":467,"end":476},"obj":"NN"},{"id":"T3815","span":{"begin":462,"end":466},"obj":"JJ"},{"id":"T3814","span":{"begin":458,"end":461},"obj":"DT"},{"id":"T3813","span":{"begin":455,"end":456},"obj":"-RRB-"},{"id":"T3812","span":{"begin":446,"end":455},"obj":"NNP"},{"id":"T3811","span":{"begin":437,"end":445},"obj":"NNP"},{"id":"T3810","span":{"begin":436,"end":437},"obj":"-LRB-"},{"id":"T3809","span":{"begin":429,"end":435},"obj":"NN"},{"id":"T3808","spa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:"R2955","pred":"arg2Of","subj":"T3812","obj":"T3810"},{"id":"R2956","pred":"arg1Of","subj":"T3812","obj":"T3811"},{"id":"R2957","pred":"arg3Of","subj":"T3813","obj":"T3810"},{"id":"R2958","pred":"arg1Of","subj":"T3816","obj":"T3814"},{"id":"R2959","pred":"arg1Of","subj":"T3816","obj":"T3815"},{"id":"R2960","pred":"arg1Of","subj":"T3816","obj":"T3817"},{"id":"R2961","pred":"arg2Of","subj":"T3816","obj":"T3818"},{"id":"R2962","pred":"arg1Of","subj":"T3816","obj":"T3832"},{"id":"R2963","pred":"arg2Of","subj":"T3816","obj":"T3833"},{"id":"R2964","pred":"arg2Of","subj":"T3818","obj":"T3817"},{"id":"R2965","pred":"arg1Of","subj":"T3818","obj":"T3819"},{"id":"R2966","pred":"arg1Of","subj":"T3818","obj":"T3831"},{"id":"R2967","pred":"arg2Of","subj":"T3820","obj":"T3819"},{"id":"R2968","pred":"arg1Of","subj":"T3820","obj":"T3821"},{"id":"R2969","pred":"arg2Of","subj":"T3823","obj":"T3821"},{"id":"R2970","pred":"arg1Of","subj":"T3823","obj":"T3822"},{"id":"R2971","pred":"arg1Of","subj":"T3823","obj":"T3824"},{"id":"R2972","pred":"arg1Of","subj":"T3823","obj":"T3828"},{"id":"R2973","pred":"arg1Of","subj":"T3823","obj":"T3829"},{"id":"R2974","pred":"arg1Of","subj":"T3825","obj":"T3826"},{"id":"R2975","pred":"arg2Of","subj":"T3826","obj":"T3824"},{"id":"R2976","pred":"arg2Of","subj":"T3827","obj":"T3826"},{"id":"R2977","pred":"arg3Of","subj":"T3830","obj":"T3821"},{"id":"R2978","pred":"arg2Of","subj":"T3833","obj":"T3831"},{"id":"R2979","pred":"arg2Of","subj":"T3833","obj":"T3832"},{"id":"R2980","pred":"arg1Of","subj":"T3833","obj":"T3834"},{"id":"R2981","pred":"arg2Of","subj":"T3835","obj":"T3834"},{"id":"R2982","pred":"arg2Of","subj":"T3836","obj":"T3835"},{"id":"R2983","pred":"arg1Of","subj":"T3838","obj":"T3837"},{"id":"R2984","pred":"arg1Of","subj":"T3838","obj":"T3839"},{"id":"R2985","pred":"arg2Of","subj":"T3838","obj":"T3840"},{"id":"R2986","pred":"arg2Of","subj":"T3840","obj":"T3839"},{"id":"R2987","pred":"arg1Of","subj":"T3840","obj":"T3841"},{"id":"R2988","pred":"arg2Of","subj":"T3842","obj":"T3841"},{"id":"R2989","pred":"arg1Of","subj":"T3843","obj":"T3844"},{"id":"R2990","pred":"arg2Of","subj":"T3844","obj":"T3842"},{"id":"R2991","pred":"arg2Of","subj":"T3847","obj":"T3844"},{"id":"R2992","pred":"arg1Of","subj":"T3847","obj":"T3845"},{"id":"R2993","pred":"arg1Of","subj":"T3847","obj":"T3846"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"2.5. Western Blots\nCellular proteins were prepared from ICH cerebral hemispheres, electrophoresed with SDS-polyacrylamide gel and transferred onto Hybond ECL membranes (Amersham Pharmacia, Piscataway, NJ). The ECL membranes were incubated with the appropriate primary antibody (WuHan, BA1717) followed by incubation with peroxidase-conjugated secondary antibodies (Golden Bridge, PV-6001). The signals were detected with the ECL system (Amersham Pharmacia). The same membranes were probed with anti-GAPDH (glyceraldehyde-3-phosphate dehydrogenase, Biodesign, Saco, Maine) after being washed with stripping buffer. The signals were quantified by scanning densitometry and computer-assisted image analysis."}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T3726","span":{"begin":506,"end":546},"obj":"Protein"},{"id":"T3725","span":{"begin":499,"end":504},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"2.5. Western Blots\nCellular proteins were prepared from ICH cerebral hemispheres, electrophoresed with SDS-polyacrylamide gel and transferred onto Hybond ECL membranes (Amersham Pharmacia, Piscataway, NJ). The ECL membranes were incubated with the appropriate primary antibody (WuHan, BA1717) followed by incubation with peroxidase-conjugated secondary antibodies (Golden Bridge, PV-6001). The signals were detected with the ECL system (Amersham Pharmacia). The same membranes were probed with anti-GAPDH (glyceraldehyde-3-phosphate dehydrogenase, Biodesign, Saco, Maine) after being washed with stripping buffer. The signals were quantified by scanning densitometry and computer-assisted image analysis."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T3959","span":{"begin":521,"end":546},"obj":"http://www.uniprot.org/uniprot/P04406"},{"id":"T3958","span":{"begin":499,"end":504},"obj":"http://www.uniprot.org/uniprot/P04406"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"2.5. Western Blots\nCellular proteins were prepared from ICH cerebral hemispheres, electrophoresed with SDS-polyacrylamide gel and transferred onto Hybond ECL membranes (Amersham Pharmacia, Piscataway, NJ). The ECL membranes were incubated with the appropriate primary antibody (WuHan, BA1717) followed by incubation with peroxidase-conjugated secondary antibodies (Golden Bridge, PV-6001). The signals were detected with the ECL system (Amersham Pharmacia). The same membranes were probed with anti-GAPDH (glyceraldehyde-3-phosphate dehydrogenase, Biodesign, Saco, Maine) after being washed with stripping buffer. The signals were quantified by scanning densitometry and computer-assisted image analysis."}

    UBERON-AE

    {"project":"UBERON-AE","denotations":[{"id":"T3715","span":{"begin":60,"end":80},"obj":"http://purl.obolibrary.org/obo/UBERON_0001869"}],"text":"2.5. Western Blots\nCellular proteins were prepared from ICH cerebral hemispheres, electrophoresed with SDS-polyacrylamide gel and transferred onto Hybond ECL membranes (Amersham Pharmacia, Piscataway, NJ). The ECL membranes were incubated with the appropriate primary antibody (WuHan, BA1717) followed by incubation with peroxidase-conjugated secondary antibodies (Golden Bridge, PV-6001). The signals were detected with the ECL system (Amersham Pharmacia). The same membranes were probed with anti-GAPDH (glyceraldehyde-3-phosphate dehydrogenase, Biodesign, Saco, Maine) after being washed with stripping buffer. The signals were quantified by scanning densitometry and computer-assisted image analysis."}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T3729","span":{"begin":618,"end":625},"obj":"http://purl.obolibrary.org/obo/GO_0023052"},{"id":"T3728","span":{"begin":394,"end":401},"obj":"http://purl.obolibrary.org/obo/GO_0023052"},{"id":"T3727","span":{"begin":19,"end":27},"obj":"http://purl.obolibrary.org/obo/GO_0007349"}],"text":"2.5. Western Blots\nCellular proteins were prepared from ICH cerebral hemispheres, electrophoresed with SDS-polyacrylamide gel and transferred onto Hybond ECL membranes (Amersham Pharmacia, Piscataway, NJ). The ECL membranes were incubated with the appropriate primary antibody (WuHan, BA1717) followed by incubation with peroxidase-conjugated secondary antibodies (Golden Bridge, PV-6001). The signals were detected with the ECL system (Amersham Pharmacia). The same membranes were probed with anti-GAPDH (glyceraldehyde-3-phosphate dehydrogenase, Biodesign, Saco, Maine) after being washed with stripping buffer. The signals were quantified by scanning densitometry and computer-assisted image analysis."}

    GO-MF

    {"project":"GO-MF","denotations":[{"id":"T3731","span":{"begin":353,"end":363},"obj":"http://purl.obolibrary.org/obo/GO_0003823"},{"id":"T3730","span":{"begin":268,"end":276},"obj":"http://purl.obolibrary.org/obo/GO_0003823"}],"text":"2.5. Western Blots\nCellular proteins were prepared from ICH cerebral hemispheres, electrophoresed with SDS-polyacrylamide gel and transferred onto Hybond ECL membranes (Amersham Pharmacia, Piscataway, NJ). The ECL membranes were incubated with the appropriate primary antibody (WuHan, BA1717) followed by incubation with peroxidase-conjugated secondary antibodies (Golden Bridge, PV-6001). The signals were detected with the ECL system (Amersham Pharmacia). The same membranes were probed with anti-GAPDH (glyceraldehyde-3-phosphate dehydrogenase, Biodesign, Saco, Maine) after being washed with stripping buffer. The signals were quantified by scanning densitometry and computer-assisted image analysis."}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T3738","span":{"begin":353,"end":363},"obj":"http://purl.obolibrary.org/obo/GO_0042571"},{"id":"T3737","span":{"begin":268,"end":276},"obj":"http://purl.obolibrary.org/obo/GO_0042571"},{"id":"T3736","span":{"begin":353,"end":363},"obj":"http://purl.obolibrary.org/obo/GO_0019815"},{"id":"T3735","span":{"begin":268,"end":276},"obj":"http://purl.obolibrary.org/obo/GO_0019815"},{"id":"T3734","span":{"begin":467,"end":476},"obj":"http://purl.obolibrary.org/obo/GO_0016020"},{"id":"T3733","span":{"begin":214,"end":223},"obj":"http://purl.obolibrary.org/obo/GO_0016020"},{"id":"T3732","span":{"begin":158,"end":167},"obj":"http://purl.obolibrary.org/obo/GO_0016020"}],"text":"2.5. Western Blots\nCellular proteins were prepared from ICH cerebral hemispheres, electrophoresed with SDS-polyacrylamide gel and transferred onto Hybond ECL membranes (Amersham Pharmacia, Piscataway, NJ). The ECL membranes were incubated with the appropriate primary antibody (WuHan, BA1717) followed by incubation with peroxidase-conjugated secondary antibodies (Golden Bridge, PV-6001). The signals were detected with the ECL system (Amersham Pharmacia). The same membranes were probed with anti-GAPDH (glyceraldehyde-3-phosphate dehydrogenase, Biodesign, Saco, Maine) after being washed with stripping buffer. The signals were quantified by scanning densitometry and computer-assisted image analysis."}

    sentences

    {"project":"sentences","denotations":[{"id":"T3722","span":{"begin":614,"end":704},"obj":"Sentence"},{"id":"T3721","span":{"begin":458,"end":613},"obj":"Sentence"},{"id":"T3720","span":{"begin":390,"end":457},"obj":"Sentence"},{"id":"T3719","span":{"begin":206,"end":389},"obj":"Sentence"},{"id":"T3718","span":{"begin":19,"end":205},"obj":"Sentence"},{"id":"T3717","span":{"begin":5,"end":18},"obj":"Sentence"},{"id":"T3716","span":{"begin":0,"end":4},"obj":"Sentence"},{"id":"T77","span":{"begin":0,"end":4},"obj":"Sentence"},{"id":"T78","span":{"begin":5,"end":18},"obj":"Sentence"},{"id":"T79","span":{"begin":19,"end":205},"obj":"Sentence"},{"id":"T80","span":{"begin":206,"end":389},"obj":"Sentence"},{"id":"T81","span":{"begin":390,"end":457},"obj":"Sentence"},{"id":"T82","span":{"begin":458,"end":613},"obj":"Sentence"},{"id":"T83","span":{"begin":614,"end":704},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"2.5. Western Blots\nCellular proteins were prepared from ICH cerebral hemispheres, electrophoresed with SDS-polyacrylamide gel and transferred onto Hybond ECL membranes (Amersham Pharmacia, Piscataway, NJ). The ECL membranes were incubated with the appropriate primary antibody (WuHan, BA1717) followed by incubation with peroxidase-conjugated secondary antibodies (Golden Bridge, PV-6001). The signals were detected with the ECL system (Amersham Pharmacia). The same membranes were probed with anti-GAPDH (glyceraldehyde-3-phosphate dehydrogenase, Biodesign, Saco, Maine) after being washed with stripping buffer. The signals were quantified by scanning densitometry and computer-assisted image analysis."}

    simple1

    {"project":"simple1","denotations":[{"id":"T3743","span":{"begin":506,"end":546},"obj":"Protein"},{"id":"T3742","span":{"begin":499,"end":504},"obj":"Protein"}],"text":"2.5. Western Blots\nCellular proteins were prepared from ICH cerebral hemispheres, electrophoresed with SDS-polyacrylamide gel and transferred onto Hybond ECL membranes (Amersham Pharmacia, Piscataway, NJ). The ECL membranes were incubated with the appropriate primary antibody (WuHan, BA1717) followed by incubation with peroxidase-conjugated secondary antibodies (Golden Bridge, PV-6001). The signals were detected with the ECL system (Amersham Pharmacia). The same membranes were probed with anti-GAPDH (glyceraldehyde-3-phosphate dehydrogenase, Biodesign, Saco, Maine) after being washed with stripping buffer. The signals were quantified by scanning densitometry and computer-assisted image analysis."}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T3972","span":{"begin":506,"end":546},"obj":"Protein"},{"id":"T3971","span":{"begin":499,"end":504},"obj":"Protein"}],"text":"2.5. Western Blots\nCellular proteins were prepared from ICH cerebral hemispheres, electrophoresed with SDS-polyacrylamide gel and transferred onto Hybond ECL membranes (Amersham Pharmacia, Piscataway, NJ). The ECL membranes were incubated with the appropriate primary antibody (WuHan, BA1717) followed by incubation with peroxidase-conjugated secondary antibodies (Golden Bridge, PV-6001). The signals were detected with the ECL system (Amersham Pharmacia). The same membranes were probed with anti-GAPDH (glyceraldehyde-3-phosphate dehydrogenase, Biodesign, Saco, Maine) after being washed with stripping buffer. The signals were quantified by scanning densitometry and computer-assisted image analysis."}

    BioNLP16_Messiy

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    DLUT931

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    bionlp-st-ge-2016-test-ihmc

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    bionlp-st-ge-2016-spacy-parsed

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Western Blots\nCellular proteins were prepared from ICH cerebral hemispheres, electrophoresed with SDS-polyacrylamide gel and transferred onto Hybond ECL membranes (Amersham Pharmacia, Piscataway, NJ). The ECL membranes were incubated with the appropriate primary antibody (WuHan, BA1717) followed by incubation with peroxidase-conjugated secondary antibodies (Golden Bridge, PV-6001). The signals were detected with the ECL system (Amersham Pharmacia). The same membranes were probed with anti-GAPDH (glyceraldehyde-3-phosphate dehydrogenase, Biodesign, Saco, Maine) after being washed with stripping buffer. The signals were quantified by scanning densitometry and computer-assisted image analysis."}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T3741","span":{"begin":506,"end":546},"obj":"Protein"},{"id":"T3740","span":{"begin":494,"end":504},"obj":"Protein"},{"id":"T3739","span":{"begin":321,"end":331},"obj":"Protein"}],"text":"2.5. Western Blots\nCellular proteins were prepared from ICH cerebral hemispheres, electrophoresed with SDS-polyacrylamide gel and transferred onto Hybond ECL membranes (Amersham Pharmacia, Piscataway, NJ). The ECL membranes were incubated with the appropriate primary antibody (WuHan, BA1717) followed by incubation with peroxidase-conjugated secondary antibodies (Golden Bridge, PV-6001). The signals were detected with the ECL system (Amersham Pharmacia). The same membranes were probed with anti-GAPDH (glyceraldehyde-3-phosphate dehydrogenase, Biodesign, Saco, Maine) after being washed with stripping buffer. The signals were quantified by scanning densitometry and computer-assisted image analysis."}

    testone

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    test3

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